LOCUS       XM_039106740            2843 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 120-like
            (LOC102554479), mRNA.
ACCESSION   XM_039106740
VERSION     XM_039106740.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106740.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2843
                     /gene="LOC102554479"
                     /note="zinc finger protein 120-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3 long
                     SRA reads, 33 Proteins, and 77% coverage of the annotated
                     genomic feature by RNAseq alignments, including 50 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102554479"
                     /db_xref="RGD:7587488"
     CDS             139..2004
                     /gene="LOC102554479"
                     /codon_start=1
                     /product="zinc finger protein 431-like"
                     /protein_id="XP_038962668.1"
                     /db_xref="GeneID:102554479"
                     /db_xref="RGD:7587488"
                     /translation="MDVLTYDDVHVNFTEEEWALLNPSQKSLYQCVMLETCRNLSAIG
                     YIWEDHTTEEYCKSSGRHGRYERSFTGKQTFDFIQYGNGFAVQSPTQRHNGEKPYESN
                     LCGKAFVQRNNLKTHKRTHNGEEPSECNQCCKDFVGSSALQNHKGTHTGEKLCECNQY
                     GKAFAQRSSLKRHKRTCNGEKRYKYNQSRKAFVQNHGLQKHKRTHTLQKPYECNQCCK
                     AFAGISDLQRHIRIHTGEKPYECNQCGKAFAQSSTLQNHKRTHTGEKPYECNQCGKAF
                     AQSTALQRHISTHTGEKPYECNQCCKAFAGSSHVQSHIRIHTGEKPYECNQCGKAFAQ
                     SSTLQNHKRTHTGEKPYECNQCGQTFAYRSILQRHISTHTGEKPYECNQCGKAFADRS
                     SLQRHKRTHTGEKPYECNQCGKAFAQSSTLQIHIRTHTGEKPYECNQCCKAFAESSHL
                     QSHIRIHTGEKPYECNQCGKAFAQSSTLQIHKRTHTGEKPYECNQCGQTFPYGSSLQK
                     HKRTHTGEKPYECNQCGKAFAQRSRLQIHVRTHTGEKPYECNQCGKAFADSSSLQQHK
                     RTHTGEKPYECNQCGKAFVRSRTLQRHIRTHREEKPYECNECGKAFAQRSNLKRH"
ORIGIN      
        1 agcagtcagg ggaggaggtg gctcttccag gtacaaggtc agaaacttcc tttgggaact
       61 cagcccctct gagtgcttcc gtttgtacat gctgagtcac tcttcagggt gttgtgagag
      121 gagatctgaa cgcccgacat ggatgtcctg acctatgatg atgtgcatgt gaacttcact
      181 gaggaagagt gggcattgct gaatccttct cagaagagtc tctaccaatg tgtaatgctg
      241 gagacctgta ggaatctcag tgctataggc tacatttggg aagaccatac tactgaagaa
      301 tattgtaaaa gttctggaag acatggaagg tatgaaagaa gttttactgg aaagcaaacc
      361 tttgatttta ttcagtatgg taatggcttt gcagttcaga gtcctaccca aaggcataat
      421 ggagagaagc cctatgaaag taacctatgt ggtaaagctt ttgtacagag gaataatctc
      481 aaaacacata aaaggacaca taatggagaa gaaccttctg aatgtaacca atgttgtaaa
      541 gactttgtag gaagcagtgc tctccaaaat cataaaggaa ctcacacagg agagaaactc
      601 tgtgaatgta atcaatacgg taaagccttt gcacaaagga gtagtctcaa aagacataaa
      661 aggacatgta atggagaaaa acgttataaa tataaccaat ctcgtaaagc ctttgtccaa
      721 aaccatggtc tacaaaaaca taaaagaacc catacattac agaaacccta tgaatgtaac
      781 caatgttgta aagcctttgc aggaatcagt gatctccaaa gacatataag aattcataca
      841 ggagaaaaac cctacgaatg taaccaatgt ggcaaagcct ttgcccaaag cagcactctc
      901 caaaatcata aaagaacaca cactggagag aaaccctatg aatgtaacca atgtggcaaa
      961 gcctttgcac aaagcactgc tctccaaaga catataagca ctcatacagg agagaaaccc
     1021 tatgaatgta accaatgttg taaagccttt gcaggaagca gtcatgtcca aagccatata
     1081 agaattcata caggagaaaa accctacgaa tgtaaccaat gtggcaaagc ctttgcccaa
     1141 agcagcactc tccaaaatca taaaagaaca cacactggag agaaacccta cgaatgtaac
     1201 caatgtggcc aaacctttgc atacaggagt attctccaaa gacatataag cactcataca
     1261 ggagagaaac cctatgaatg taaccaatgt ggcaaagcct ttgcagaccg cagttctctc
     1321 cagcgtcata aaagaacaca cacaggagag aaaccctatg aatgtaacca atgtggcaaa
     1381 gcctttgcac aaagcagtac tctccaaata catataagaa ctcatacagg agagaaaccc
     1441 tatgaatgta accaatgttg taaagccttt gcagaaagca gtcatcttca aagccatata
     1501 agaattcata caggagaaaa accctatgaa tgtaaccaat gtggcaaagc ctttgcccaa
     1561 agcagcactc tccaaattca taaaagaaca cacactggag agaaacccta tgaatgtaac
     1621 caatgtggcc aaacctttcc atacgggagt agtctccaaa aacataaaag aacacacaca
     1681 ggagagaaac cctatgaatg taatcaatgt ggcaaagcct ttgcacagag aagtcgtctc
     1741 caaatacatg taagaactca tacaggagag aaaccctacg aatgtaacca atgtggcaaa
     1801 gcctttgcag acagcagttc tctccaacaa cataaaagaa cacacacagg agagaaaccc
     1861 tatgaatgta accaatgtgg caaagccttt gtacgcagca ggactctcca aagacatata
     1921 agaacacaca gagaagagaa gccctatgag tgtaacgaat gtggcaaagc ctttgcacaa
     1981 aggagtaatc tcaaaagaca ttaaagaaca tataattgag aaaaacctta tgaattaacc
     2041 agtgttgcaa accctttgta aaatgtggtg atcaaacccc gtgggaaaga gccctcaccg
     2101 cctggtcagg tgggcactcc tgaggctgca gagcgggaga gaccaccaac actgcccacc
     2161 cctgcccaca tccctggccc aagaggaaac tgtatacagc ctctgggttc ctgcagagga
     2221 gggcccagga gcagcaggtc cgctacatct gagagaccgc cggaacctga agggactgac
     2281 gggataaaca gttctctgca cccaaatcct gtgggaggga gagctaaacc ttcagagagg
     2341 cagacacacc tgggaaacca gaagagactg cactctgcat acgttactga ttacagaaga
     2401 aaacaccaaa cgccatctgg aaccctggtg cacggacgct cgtggaaagg gcggcgcaga
     2461 tcttcctggt tgctgctgcc gaggagagct cataagcaac accccacgag gaaacttgag
     2521 ccttgggacc acaggtaaga ccaacttttc tgctccaagc aaactgcctg gtgaactcaa
     2581 gacacagacc cccaggaaca gctgaagacc tgtagatagg aaaaactaca cgcccaaagc
     2641 agaacactct gtccccataa ctggctgaaa gaaaacagga aaacaggtct acagcactcc
     2701 tgaaacacag gcttatagga cagtctaacc actgtcagaa atagcagaac aggggttggg
     2761 gatttagctc agcggtagag cacttgccta gcaagcggaa ggccctgggt tcggtcccca
     2821 gctccggaaa ataaaaaaaa aga
//
