LOCUS       XM_006235971            1270 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102554398
            (LOC102554398), transcript variant X1, mRNA.
ACCESSION   XM_006235971
VERSION     XM_006235971.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006235971.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1270
                     /gene="LOC102554398"
                     /note="uncharacterized LOC102554398; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 37 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:102554398"
                     /db_xref="RGD:7751725"
     CDS             40..546
                     /gene="LOC102554398"
                     /codon_start=1
                     /product="uncharacterized protein LOC102554398"
                     /protein_id="XP_006236033.1"
                     /db_xref="GeneID:102554398"
                     /db_xref="RGD:7751725"
                     /translation="MPGWSVLFLLQNHRVQRRGQCCFWLRVAEVSCWVIKFSSCCKAK
                     QHFPPLGSSHRFPECLCLGPTPGNTHPQPNHATIETPGLSGSDDRTRFAQCCRPAACG
                     PSFLFRVARGGDLQEVVSLDRHEERAQEEWKLCLGVVYLLNASLSLLYFLVPATSILQ
                     SRPPSKVT"
ORIGIN      
        1 acacgcgggg ctccacccga ggggctggcg gtccgcggaa tgccgggttg gagcgtcctc
       61 tttctcctac agaatcatcg ggtgcagcgt cgcggccagt gctgcttttg gttacgcgtg
      121 gcagaagtct cgtgctgggt gataaagttt tcctcctgct gcaaagcgaa gcaacatttt
      181 ccacctctcg gctcctccca cagattccca gagtgtctct gtttaggtcc aacccccgga
      241 aacacacacc cgcagcccaa ccacgccacg attgaaaccc cgggtctaag tggctcggat
      301 gaccgcactc gcttcgcgca atgctgccgc cctgctgcgt gtggaccctc attcctgttc
      361 agagtggccc gtggcgggga tctacaggag gtggtgagtc tcgacagaca tgaagaaagg
      421 gcccaggagg agtggaaact ctgccttgga gtagtctatc tcttgaacgc ctctctgagc
      481 ctgctttatt ttcttgtgcc agccacctct attctgcaaa gcagacctcc ctctaaagtc
      541 acttaaccac aggggatccc aacagtggaa tccaggagac ccgcattaag gtaccgatga
      601 gctctgtggc cagtcctgtc ttctcttcag agaacagcca ggatgctgac aactcagtgt
      661 cttaagtcca cactcagcac ttctccagtg acagagtcag caggcggggc tcatgtggcc
      721 tgaaatgtgt ctgtctgcta aatgggcacc acccatgcca gccgggagtg aagtcccagt
      781 cccccagcat ctgccctccg gactctgctc aggagtgaga tgtttgcttt agggtgttta
      841 tgttgtttgc ttgtttttgt ctttatttgg ggtggggtgg tatcacacca gtaaagtaga
      901 ggtcagagga caacgctaga gaatcagttc cctccttcca ccttcgcatg ggttctgaga
      961 ctggacacat gctgctaact ggtgcggcac catgtgtctt tacccactga gccatcttgc
     1021 tggcccattc tagcaatcca gccttgcctc ccatcaggca gaaagacttg gactcaagta
     1081 gtcagtgtgt gttcatcatc cgtttagctg tgagcttcga gtatgcagta agtaaagacg
     1141 aaccctgaga ggttgtgatt ctcgctgttc cctgaatgtg actgatttct gacctttcac
     1201 tgatctgcct gatggtacac ggtgaaagaa tacatactaa acaccataat aaagttgcct
     1261 tggagattaa
//
