LOCUS       XM_039098093            1169 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102554391
            (LOC102554391), transcript variant X1, mRNA.
ACCESSION   XM_039098093
VERSION     XM_039098093.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1169
                     /gene="LOC102554391"
                     /note="uncharacterized LOC102554391; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102554391"
                     /db_xref="RGD:7680597"
     CDS             64..963
                     /gene="LOC102554391"
                     /codon_start=1
                     /product="IQ domain-containing protein M-like isoform X1"
                     /protein_id="XP_038954021.1"
                     /db_xref="GeneID:102554391"
                     /db_xref="RGD:7680597"
                     /translation="MRSSHLPHESAQTLSGASIIFKDYYIRPLKKKEIQPIKKELKPL
                     NKRSQIIVKPDKINNKVKRIGPHIEIFQLFQGRKRLIFTKRIVKLIIIIQAFIRGWLE
                     RKRLQRLKSKALYHGPNLKAVIKMYRSLIHRVRHRLGLWRTRQIIYFGELEEWMDRKK
                     FYETMFAKREDWQGLERSELLKYFNDCGHFPTQKQIDELWDLFHRYSEGKYSEVIRKS
                     SAIELLFTLYPPQGARVNAGTRLRSTWLRPLVDGEEGYKYIAPFLPSLSVLEASKGVV
                     RLPHLMNQYQEKKGKKNVLTVLD"
ORIGIN      
        1 ttttaacctc catcaatatt tccagctgac aggactcttt atgatcagag gagtgctgca
       61 ttgatgagat cttcccattt gcctcatgaa tctgctcaga ctttatcagg agcctcaata
      121 atatttaagg attattatat cagacccttg aagaagaaag agatacaacc tatcaagaaa
      181 gagctgaagc ctctaaacaa aaggtcacag attattgtaa agcctgataa aatcaacaac
      241 aaagttaaaa gaattgggcc acacatagaa attttccagc tgttccaggg aagaaaaaga
      301 cttatattta ctaaaagaat tgttaaactg atcatcatta tacaagcatt tatcaggggg
      361 tggcttgagc gcaaaagact tcaacgatta aagagcaagg ctttgtatca tgggccgaat
      421 ttgaaagcag ttataaaaat gtatcggagc ttaatccacc gtgttagaca ccgtcttggt
      481 ctttggagaa caagacagat tatatacttt ggagagctag aagaatggat ggacagaaaa
      541 aaattctatg aaaccatgtt tgccaagaga gaagactggc aaggattaga aagaagtgag
      601 ctgctgaagt acttcaacga ctgtggtcat ttccccacac agaagcagat cgatgagctc
      661 tgggacctgt tccacagata tagtgaagga aaatattctg aagtaatcag aaagtccagt
      721 gctattgaac tattatttac actctatcct cctcaaggtg ccagagtgaa cgctggcaca
      781 agactgcggt ccacgtggct gagacccttg gtggatgggg aagaaggcta taagtacata
      841 gcacccttcc tacctagtct cagtgtgctg gaggcttcca agggtgttgt aagactccct
      901 catctgatga atcagtatca agaaaaaaag ggaaagaaga acgtcttgac agtattagat
      961 tagagagcta atctctgtga agatctccac accgtttcat ctctgtgcag ggaagtcttc
     1021 tgctatgact ttgttaaaga agtttactgg acttaggaac tagaaatctt cattatcttc
     1081 tatatctatt atccttagtt ttggtctttt aattatgttc tgaaattcct ggatgttttg
     1141 aattcaataa accatatatg tttatctga
//
