LOCUS       XM_039106699            2413 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102554288
            (LOC102554288), transcript variant X1, mRNA.
ACCESSION   XM_039106699
VERSION     XM_039106699.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2413
                     /gene="LOC102554288"
                     /note="uncharacterized LOC102554288; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     ESTs, 5 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 22 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:102554288"
                     /db_xref="RGD:7521950"
     CDS             1..1050
                     /gene="LOC102554288"
                     /codon_start=1
                     /product="protein NDRG3 isoform X1"
                     /protein_id="XP_038962627.1"
                     /db_xref="GeneID:102554288"
                     /db_xref="RGD:7521950"
                     /translation="MGSLPSRGKACPAQDPVRLVQARDLQADKSCFNTFFNFEDMQEI
                     TQHFAVCHVDAPGQQEAAPSFPTGYQYPTMDELAEMLPPVLTHLSMKSIIGIGVGAGA
                     YILSRFALNHPELVEGLVLINIDPCAKGWIDWAASKLSGLTTNVVDIILAHHFGQEEL
                     QANLDLIQTYRLHIAQDINQENLQLFLGSYNGRRDLEIERPILGQNDNRLKTLKCSTL
                     LVVGDNSPAVEAVVECNSRLDPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMGY
                     IPYVQLSHLSSESVPSASMTRLARSRTHSTSSSIGSGESPFSRSVTSNQSDGTQESCE
                     SPDVLDRHQTMEVSC"
ORIGIN      
        1 atgggaagtt tgcccagcag agggaaagcc tgcccagccc aagatccagt acgtctggtc
       61 caggccagag acctacaagc agataaatcc tgcttcaaca cgttcttcaa ctttgaggat
      121 atgcaagaga tcacccagca ctttgctgtc tgtcacgtgg atgccccagg ccaacaggaa
      181 gcagcaccct ccttcccaac agggtatcag taccccacca tggatgagct ggctgagatg
      241 ctgcctcccg ttcttacaca cctaagtatg aagagcatca ttggcattgg agttggagca
      301 ggagcctaca tcctcagcag atttgcactc aatcatccgg agctggtaga aggtcttgtg
      361 ctcattaaca ttgacccgtg tgctaaaggc tggattgact gggcagcttc caaactctcc
      421 ggcttgacca ccaacgtcgt ggacataatt ttggctcatc acttcgggca ggaggagttg
      481 caggccaatt tggacctcat tcaaacatac agactgcaca ttgctcaaga tatcaatcaa
      541 gaaaatctcc agctcttcct gggttcctat aatggacgca gagacctgga gatcgaaaga
      601 cctattctgg gccaaaatga taacagattg aaaacattaa agtgttctac tttactggtg
      661 gtgggggaca attcacctgc tgtggaagct gtggttgaat gtaattctcg cctcgaccct
      721 ataaatacaa ctttgctaaa gatggcagac tgtggaggac tgccccaagt agttcagcct
      781 gggaagctca ccgaggcctt caagtacttt ttgcagggaa tgggctacat cccgtatgtg
      841 cagctcagtc acctcagcag cgagtcagta ccatctgcca gcatgacccg gctcgcccga
      901 tcacgaaccc actccacctc aagtagcatt ggctctggag aaagtccctt cagcaggtct
      961 gtgaccagca atcagtcaga tggaactcaa gaatcctgtg agtcccctga tgtcctggac
     1021 agacaccaga ccatggaagt gtcttgctaa gcagatgctc ctcccctgga ccatgcaagt
     1081 ccctcctcct tgaaatgacc actccataat agaacatttc attccgtcag ctggcctcca
     1141 ctttctttca ctcatgcatg gccacagcat ctctctctag taggctggat tatcattctc
     1201 tctgcccttt tgtatgtacc gagaaccaca cccatgccat tactgtaaca ttccaacacc
     1261 ttgatctgat ccgatctcca tatcttctct tgccagcctt tccctgcgct ccctcaaata
     1321 tgtatctgac gagactcttt aattcccaac tccatgtgtg tgcgagcacg cgtgtctgtg
     1381 tctgtgtgtg catagttctg tgattttaga catgctttct tgtagtgctt ctgcaaaggg
     1441 acttttttga attctcagtg gcatttttaa gggaaatatg cagagtggat atctgggtgg
     1501 gttaggccac aagattggat tttggttcca cttggacaac taacagtatt tgtagagtga
     1561 tttcaggaga gagcaggtct gaggaatatg tgaggctata gttactgtgt gggccactgg
     1621 tgaggtaacg attacacaga taggcaggca gggtggcagt cacctcccct gtccacgtgg
     1681 attcatacct gtcatcgtgt aagtcagagg gagggatctg aagcctgtga gtgatgtctg
     1741 gtacactgtg gagttttctc cagagaagtg gcctaagccc tcggttagcc gagaaagatg
     1801 gaaagcaaag cgccaggctt cgctctacag agagaaagtg ctgtccctga agcatctgag
     1861 tccacttacc agacacccag gcatcagcag gaagtgcctc ctggtctgag ggagagcggt
     1921 tctccatccc tcggtcccag agaacagagt gatatttgaa aatgccatcg atggtgaggg
     1981 ttttattggg gaagaggaag gaccgttagc acacaccatc atggtaaata agtggagcct
     2041 aagtgtcagc agacatgatg aaagccaagt caccttgaag gtgacttttc tgggaaggtc
     2101 ttaagcatgt aatgtccctt aataggaggg aaagggacaa tctcagggca gccttgtcca
     2161 ggtagaaata ttttgccccc ctgtctgttg ttggtgaggg gtcacaccag ccagggagac
     2221 cctctgggaa gaagctgcca cacacaagga ctctggaagg atccacatgt gagcccagcc
     2281 agggtcatac ggttcccaac ctgaggaaaa ggtttttcac acactccttg ctttctgctg
     2341 agataagaaa ggtgtcactc tgcagagtgt gactttttac aggttaaata aagctgtata
     2401 tgtctcattg tta
//
