LOCUS       XM_039080605            2005 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102554106
            (LOC102554106), mRNA.
ACCESSION   XM_039080605
VERSION     XM_039080605.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080605.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2005
                     /gene="LOC102554106"
                     /note="uncharacterized LOC102554106; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 90%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:102554106"
                     /db_xref="RGD:7499219"
     CDS             1..996
                     /gene="LOC102554106"
                     /codon_start=1
                     /product="serine/arginine repetitive matrix protein
                     1-like"
                     /protein_id="XP_038936533.1"
                     /db_xref="GeneID:102554106"
                     /db_xref="RGD:7499219"
                     /translation="MTPEYIILTTTAKRREQQQSGIPDRRENWQFKVVASLRVRAGNT
                     PEVESRKTPVHSFIPRPHGFPRRCQSVCAISDRKGGGHLPAALPGPRRQASGAKSAAP
                     SVRRGPERVPLEPISPVRNALRPRRLPTAAALRSSPLRFPGTLGAAPRTATTRSEPQA
                     RPPTSRSTPRRRPRRCPSPSKRPERRLESPSVGEPPGPCGSGARRTSAPQGGGGAGRP
                     VSRPIPRRQNAEEERRTALQHRRGTFSARERAAGGTVAGGRFPELPSVTPAGRSQPGT
                     NTATAILPRPRPQAPPPPPPPAPPGVAPPSAPCVLASRPAPSPPPRPAAVTSGTR"
ORIGIN      
        1 atgactcctg agtacattat actcacaaca acagcaaaaa gaagagagca acagcagagt
       61 ggaatcccag atcgaaggga aaactggcaa ttcaaagtgg tggcctcact ccgggtgagg
      121 gcagggaaca ccccggaggt ggagtcccgg aagacccccg ttcactcgtt catccccagg
      181 ccacacggct ttccccgccg gtgccagagc gtgtgcgcga tctccgatcg caaaggaggc
      241 ggtcatctcc ccgccgccct cccgggcccc aggcggcagg catcgggggc gaagtccgcg
      301 gcgcccagtg tgcggcgagg cccagaaaga gtcccgttag agccgatttc acccgtcagg
      361 aatgcgctcc gcccccgccg cctccctacg gcggccgccc tccggtctag tccgctccgc
      421 ttccccggaa cgctcggggc agcgccgcgg acagccacaa cgcggtcgga gccgcaggcc
      481 cggcccccca cgtcccgatc cacaccccgg agacggccgc gccgttgtcc cagcccaagt
      541 aagaggcctg agcggcgcct cgaatcccca tccgtagggg agccgcccgg cccctgcggc
      601 tccggcgccc gccgtacctc agctcctcag ggcggcggcg gcgcagggcg gccggtgagc
      661 aggcccatcc cgcggaggca aaacgcggag gaagaacgga ggacggctct tcagcaccgc
      721 cgcggaacct tctcagctag ggagagagct gccggtggaa cggttgcggg cggccgcttt
      781 cccgaactcc cctcagtgac tccagccgga cggtcgcagc cgggaaccaa cacagcaact
      841 gccattctcc cccgccctcg ccctcaagcc ccgccccctc caccccctcc tgccccaccc
      901 ggcgtggccc cgcccagcgc gccttgcgtc ttggcgtcac gccccgcccc gtccccacct
      961 cctcggccgg ccgcggttac ctctgggacg cggtagtagt tccttggctt gggcacgttc
     1021 ccctcgcgct gcgcgctctc gccgccgtcc ctcccgcggg ctgcgactca ctctgagtgc
     1081 gccgggccgt tgggcgggag acacccttct tgtaaccccg acccggtctc cgtgaggtaa
     1141 ccaaagggga cggcgggagc cgcgccccag atggagcgcg tcctggaatc gaggaccctg
     1201 tctcggcttt tcgcagcctg ttttcacctc tttgtttctc actgttcacc tgcttgagtg
     1261 gcgccctcct gagagcagag ccaaagtgtg gaggccgggt tctgctactc tcagactctc
     1321 ggtccccaaa gaaatatctc cgcccttgtc aatgtctgat atagtcagtt actttgcccg
     1381 tgtgctccat tctcttccag cttttgatcc agtcggacac cctttgaact tttcacctac
     1441 acaagacttg agattggaag ggtctgctgt tactagtcca atatgcatct tctgaggaag
     1501 agatatacct gaaggacatc cccacttaaa tctatggaga gtcctggatt aggcacatct
     1561 cagaatcctg gtaatgagtc acttccaggc tgacagtccc ttagccccta gaccacactc
     1621 tcccctccct ctccagctcc cagtctcctg ctgtggctcc ttcctctcat ccgcccttaa
     1681 agaactcact ttgggttggg agagaaaaca tcacaagttt ggaggaaaat tgactgtgcc
     1741 aaccagcatt cctaaaagcg atcaaagaaa acacgctttt caaatagttg gatagctaag
     1801 tcagggagag aaatagctgc cgttgcaggg ccagagatct caagacaatt ttaaattgtt
     1861 cctaggactt taatatcctg tgatgaaaag gcaacatttt gtacaataca tcccaaggac
     1921 aggaagaaaa actgaaaccc agaactgcaa tgtttccaca gctttgttca aataaaaacc
     1981 ctccccacaa aagttgcaaa tgtaa
//
