LOCUS       XM_039093719            5251 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L15-like
            (LOC102554047), mRNA.
ACCESSION   XM_039093719
VERSION     XM_039093719.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093719.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5251
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5251
                     /gene="LOC102554047"
                     /note="60S ribosomal protein L15-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 48 Proteins, and 95% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102554047"
                     /db_xref="RGD:7597681"
     CDS             2584..3039
                     /gene="LOC102554047"
                     /codon_start=1
                     /product="60S ribosomal protein L15-like"
                     /protein_id="XP_038949647.1"
                     /db_xref="GeneID:102554047"
                     /db_xref="RGD:7597681"
                     /translation="MPFPLVAAIRIRVRRGGHKRPVPKGENYGKPVHHGVNQLKFARS
                     LQSVAEERAGCHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRKNPDTQWITKPV
                     HKHREMCGLTSAGCKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR"
ORIGIN      
        1 tgctaaacag gaatggaatt taacaaaatg aaatgcaaat ctttggatgc ttggcatttt
       61 acttcccatt caagtctctg aggcccaact atcagaagat gtattcacta cttatagatt
      121 acttacttat aacttattga ttataagtgt aagaactgta tgatgagaac agtgcggaga
      181 cttgtgtatg tctgaccttt taggaggcag gaggcgacag ctcgtgtagc ccaggatggt
      241 ccctaatcac tgtgctggca aagatgactt tgaattcctg accctctggc tccatttctc
      301 aagtattagg accacatcca tgaacgctag gcaagcatct acatccctag tctctttttc
      361 agaaaaagaa cgtattaata tactaatggc agagaatttt ttgtagtttg ttgagacata
      421 gctgtgtgct accatatctg tctcagcata caggttgtta aattttaaaa aggaagaaaa
      481 aggaacacaa gtctgggcta tccaaaatta ccagcggctg ggaaaccggc taatgtaacc
      541 aggttgtgaa tgaaaacatt aacttccggc cagtgtgttc tgctggctcg ccgctgcccc
      601 tgtaaacggt gccatgacct agtcaccttc ataagcatcc tctaggaccg cactggctat
      661 gatgcactct cctgtgacct aggcctagga tggtcagcag ggcacgaggt aacgaaggtg
      721 gaaaagcctc tgctgacagc cccaagagga atttaaaaca taataatcac tggggctgat
      781 aatcagaacc acttttatca aatgtctttg agtatgtcaa agattacgtg aagtcactca
      841 aaggtaaatg aggaacagag accagaaatt gcaaaatctt tctgtcaggg atgcagagta
      901 aatgaagcac atctcggcta agttaaataa ctaccaggtt ttcacaggga acatgtgaat
      961 caaaatgcag ggtgtcagtc ctaacataaa agatgatgag gctctaggca ggatgttaat
     1021 gacggcctag aaatggaaag tattaaccaa ctgggatcta ttacatacat acgatgacac
     1081 ctggctggtg cctgtcaaca aacaatacca gggcagaaga taatggaact agtatcatag
     1141 tgagcatgaa tgcagacaca tgcacattgc actgtgtgta tggaattcac aggacaactt
     1201 ctgggttgtt gaatgccgtc cactttgttt cagacaggct ctttcttgtg atttgtatct
     1261 cactgcaatc caggctaggt ggtgtacacc tttttagacg atattcccct ttctacctct
     1321 atcttggcct aagagcagtg agactacaga tgtgtactat agaattggtt tccatgaaaa
     1381 tccaggtcat cggggcttgg cagacaagca attttaccta cagagccacc tcaggtttct
     1441 ttagaagatt tattttttgt ttgtgttttt cttacacatg ttcatacatg tgtcatgttc
     1501 atgcctggtg ccgggaagtt cagaatagcg tgtcatatcc ctttgacctg aagttacaaa
     1561 tagctgtgag ctgccacgtg catgctgaaa cgacaactgg ggtgtgtcct ctgggagagg
     1621 agcacttaag tgttgctgag ccagcttgta tttggagtag aggcactgtt ttggaagacc
     1681 agtttctgag ggctgctctg atctctgtga acatgtgcac atgcacattt gtgcatatag
     1741 acacacatac ataaatgtaa ttaagagcaa actcttgtaa ttcagaatat ccaacaccct
     1801 cgtacataca cacacactgg aaaaacacca aagcacatga aataaaaata attaattaaa
     1861 gtttatatat tcaagcactc tttagaagca tacatcctaa aactggaatg gtaaatggag
     1921 agatagctca gcggttaaga gcacccgact gctctttcag aggtcctgag ttcaattctc
     1981 agcaaccaca tggtggctca caatcatctg taaagagatc cgatgccctc ttctgctgtg
     2041 tctgaagaca ggtacagtgt actcatatat aataaatgaa taaatctttt ttaaaaaatg
     2101 agtatagcag atcaaggaga aaaataaaat aaaaacctaa agagtcactt tatctgaaaa
     2161 agaaaagtca aataaagtat aaagaaagtt tctaaaacat actaatcttg aagtaaaatt
     2221 aaggccatat ctagggctgg agagatggct cagcggttaa gagcacggac tgctcttcca
     2281 gaggtcctga gttcaaatcc cagcaaccac atggtggctc acagccatct ggaatgagat
     2341 ctgatgccct cttcttatgt gtctgaagtc agctacagtg tacttatata aaataaataa
     2401 atcttaaaaa aaaaaaaggc catatccatc cattaatctc actggatatg atacccaagt
     2461 atctctcttg cctgtctttt acctgtgcct agacaccaag gatcattctg gaaaaaatta
     2521 aaacatcact cacccaatgt atatttattg ataaacaggt aaaatcaatt tataaaatac
     2581 tgtatgccct ttcctctagt ggcagccatc aggatccgtg tccgccgcgg tggtcacaag
     2641 cgcccagttc ctaagggtga aaactacggc aagcctgtcc accacggtgt taaccagctg
     2701 aagtttgccc gaagccttca gtctgttgct gaggagagag ctgggtgcca ttgtggagct
     2761 ttgagagtcc tgaattccta ctgggttggt gaagattcca catacaaatt ttttgaggtt
     2821 atcctcattg atccattcca taaagctatc agaaaaaatc ctgacaccca atggatcacc
     2881 aaaccagtcc acaagcacag ggagatgtgt gggctgacat cagctggctg caagagccgt
     2941 ggccttggaa agggccacaa gttccaccac accattggtg gatctcgacg tgcagcctgg
     3001 agaaggcgca acactcttca gctccaccgt taccgctagt acacgtaata tttgtaaaat
     3061 tcacatacaa taaacaactt aagacagtaa aaaaaaaata ctgtatgaag acaagtatga
     3121 gaaagtatat agttttggca atgtaggcaa tgtttttgtc aatatgccta tgacctcaga
     3181 aaaaggttga ggcaggaata tctcaagctt gagatcagtt taggctacaa aaaagtagcc
     3241 ttgtcatttg aaagcaggaa gaaacatgta tttcatctat aggggtatca gacacaaact
     3301 ataagttact atgaaatctt ctggaaagca ctaacgagag caatgaacaa tctctagcac
     3361 gttctgggca atttcatgag atgaaagcag ttaaaactga cctgcacgga gtcagggaga
     3421 agaaaatctg aatacaaagg agaggatgac tatagaaata ctgacagaaa tcatctgaga
     3481 actaatgaca aaatgactta agggctggag tgatggctct aacattgtat actcttccag
     3541 aggatccagg tttgattccc atcactcaca cggcagctta caaccattgc taactccagt
     3601 tccagtgggt ccaacaccct cttctgactt cagtgagcac caggcataaa taaggtgcat
     3661 atacatacag gtagtcaaaa catttataca cataaatcta aaaaaataaa agaaattggt
     3721 atggataaat accatccaca gtgtgaaata acaagccaaa gaattaaagg aaatatttat
     3781 aaattatata cctataagaa aatagagtat atgaaagatt ctttactgac agccatggtg
     3841 gcacatgctg ttaactacag cactcagagg gcagaggcgg gatgaccgct gtgagtgcct
     3901 tgacaacgtg gtctacactg gcaggccaga gctacacagt gagaactgtc tcaacactgc
     3961 catccaacct cgatgaacaa tggacaacaa ataacccaat cagcaacaga ccaagtacat
     4021 cctagcttgg tgctaaagtc ctacagctaa agacaataca tattctgact acaaatctct
     4081 agagctggct cagcaactct ctctctggta gccagctttc atagtcacag aggtgctgtg
     4141 ctgtctgctg ggggtgaaga gacgaagggc cttatccagt gtttgatctg aatgctaaaa
     4201 tactgacctt ccaggcaaga tgtgctcact gagggtaaaa gactagcatg accattagaa
     4261 ggtaaccaac tactttctga ttgtatctga agccagttcc acaagaagga attcgtgcct
     4321 gattactgta aatctggtga aaagcttgag tcaggtactc ataggcccta gggtaaccta
     4381 gtactgtcct tttgctacat gcccacactg tcaaactgct ttctaaatgt ttacaatcta
     4441 tccccataga ttcatactgc tctcaaccct ggtcagagaa gctgcttttt gcaatgcaca
     4501 gtacttaatg cagaacttaa caactggtca aagcggcaaa aaataagtga ctatgagtgc
     4561 tcaggccgac gtgggacaat tatcatctat attacaattc acaccaccag tcagggaaca
     4621 ctgactgggg cattgggtta taaaacctgg acaatgcaaa gaaacagcat taaatgccga
     4681 gtactggaca tgacatggtg ttgtcgtcat aaaaccacag actgtagtta cttgacctgt
     4741 tcagaatcca cagatgacca aggagacaaa attccagcat gagtgggaag gcgttcagga
     4801 ggtccaaccc ctatctgaag atgactggca actgatggga ctgtggtcac tgtgaaattg
     4861 ctcatggtac agtggatggc cacacctata cacacacagg cactgctatc cgggctcaaa
     4921 gggttatttc aaaaagaagt cagtgtggga gtgggctatg ttgtatgtgt atacgtgtag
     4981 actgttcaga agaagttgaa gggaagacga agaggtgtat ttgatcaaaa tatattatat
     5041 gcatgcctgg aattctcaaa aataaagaag atatttaagt agacattttt tgaaaggata
     5101 tatgtaaatg gaaaataagc agaagaagac atgtccactg gtttccaatc agaacaataa
     5161 tgaaatatca tttcattccc catacagatg gctattaata aaaccaggcc actatgggtc
     5221 tcactcatga tctcaatact tgagaggcag a
//
