LOCUS       XM_039108846            4355 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat domain-containing
            protein 13C-like (LOC102553980), mRNA.
ACCESSION   XM_039108846
VERSION     XM_039108846.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108846.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4355
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4355
                     /gene="LOC102553980"
                     /note="ankyrin repeat domain-containing protein 13C-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 ESTs, 1 Protein, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102553980"
                     /db_xref="RGD:7506429"
     CDS             654..2342
                     /gene="LOC102553980"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein
                     13C-like"
                     /protein_id="XP_038964774.1"
                     /db_xref="GeneID:102553980"
                     /db_xref="RGD:7506429"
                     /translation="MLRARLAAAALIARRLRRARSARGEPPGPCPSRRGGDDRGEDPL
                     PAEGPQAHKEDEDVLEPCEEEATAALGGAFTGDRSGVGGSGKGGKACPKIFSYHHRLQ
                     LKAPAAPGPGVPAPPQHNAVTATCLAPACLGSNPVVVADGGSCPSLYPVHECVFKGDV
                     RRLSSLIRTHNIGQKDNYECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALL
                     RKLKQQSRESVGEKRPRLLKALKELGDFYLELHWDFQSWVLLLSRILPSDACKIYKQG
                     INIRLDTTLIDFTDMKCQRGDLSFIFNGDAAPSESFVVLDNEQKVYQRIHHEESEMET
                     EEEVDILMSSNIYSATLSTKSISFTRAQTGWLFREDKTERVGNFLADFYLVNGLVLES
                     RKRREHLSEEDILRNKAIMESLSKGGSLTEQNFEPVRRQSLTPPPQNTITWEEYISAE
                     NGKAPHLGRELECKESKKTFKATVAMSQEFPLGIESLLNVLEVIAPFKHFNKLREFVQ
                     MKLPPGFPVKLDIPVFPMITATVTFQEFRCDEFDGSIFAIPEDYKEDPSRFPDL"
ORIGIN      
        1 ctcaacaaaa ctggaaagtc tggatgaaat gcacaatttt ctgaacagat aacaggtacc
       61 aaagttaaat tagggccaga tgaaacatct aatcagtccc cataaccccg aaagtaatga
      121 aagcagtcat taaaactctc acaaccaaaa taagcccagg accagatagg ttaagtgcag
      181 aattctatca ggccataaaa gaacacataa tacctatgct cttcaaacta ttccacaaaa
      241 taggagcaga aagaactcta gggggtgtct tccgacgtcg ctctgaggaa ggttcacaaa
      301 cagggtttca gcctttaagc tagagtttgt aactgctgtt gacctccttt gcaaaggccc
      361 agagcaccag gtcagagctc tgagccttgg gtctccaacc acagggcccc accccagcgt
      421 ggaactctgt acgaggggag cgcgggcgct ggccggacac agacgcgagt gcaggagagg
      481 ccagctaata ctccaaggcg tttccttccg agttcttgcg agaggagccg agtgaggagg
      541 cggcagcggc gtgtggtcgc gggctcttga gctgcggctt tcctcgtctg agacgagggc
      601 cgctgcctcc gggagatgcg cgtgtcgcgg acccgcggtc gccccgggag ttcatgctgc
      661 gtgcgaggct cgcagccgcc gctctaatcg cccggcgtct ccgccgcgcc cgctcggccc
      721 gcggtgagcc tcccggaccc tgtccctcgc gccgcggcgg cgatgaccgg ggagaagatc
      781 cgctccctgc ggagggacca caagcccaca aagaggacga ggacgtgctg gagccctgcg
      841 aggaggaggc gacggccgcg ctcggcggcg ccttcactgg ggacagaagc ggagtgggcg
      901 gcagcggcaa gggcggcaag gcctgcccta agatcttcag ctaccaccac cggctgcagc
      961 tgaaggcgcc cgctgcgccc ggccccggcg ttccggcccc gccgcagcac aacgcagtga
     1021 cagccacctg cctggctccg gcctgcctgg gcagtaaccc ggttgtggtg gctgacggag
     1081 gcagctgccc ctcgctctac ccggtgcacg agtgcgtctt taagggggac gtgaggagac
     1141 tgtcctcgct tatccgcacg cacaatatcg gacagaaaga taattacgaa tgtgcacatt
     1201 tactgttggc tcacaatgct ccagtaaagg tgaaaaatgc tcagggatgg agccctctgg
     1261 cggaagccat cagctatgga gacagacaga tgatcacagc tcttctaagg aaactcaagc
     1321 agcaatctag ggagagtgtt ggagaaaaac gacctcgatt gttaaaagcc ctaaaagagt
     1381 taggtgactt ttacctagaa cttcactggg attttcaaag ctgggtgctt ttgctttccc
     1441 gaattctgcc ttctgatgcc tgtaaaatat acaagcaagg tatcaatatc aggcttgaca
     1501 caactctcat agactttact gacatgaagt gccaacgagg ggatctaagc ttcatcttca
     1561 atggggatgc tgcaccctct gagtctttcg tagtgttaga caatgaacaa aaagtttatc
     1621 agcgaataca ccatgaggag tcagagatgg aaacagaaga ggaagttgat attttaatga
     1681 gcagcaatat ttattctgca actttatcaa ccaaatcaat ttctttcaca cgtgcccaaa
     1741 ctggatggct ttttcgggaa gataaaacag aaagagtagg aaactttttg gcagactttt
     1801 atctggtgaa tggacttgtt ctagaatcaa ggaaaagaag agagcacctt agcgaggagg
     1861 acattctgcg gaataaggcc atcatggaga gcctgagcaa aggtgggagc ctgacggagc
     1921 agaactttga gccggttaga agacagtctc ttacccctcc tcctcagaac actattacgt
     1981 gggaagaata catatctgct gaaaatggaa aggcaccaca cctgggcaga gaactggagt
     2041 gcaaagagag caagaagaca tttaaagcca ctgtagccat gagccaggaa tttcctctgg
     2101 gaattgagtc attattgaat gttctagaag taatagcacc cttcaagcac tttaacaagc
     2161 ttagagaatt tgttcaaatg aagcttcctc ctggctttcc tgtaaaatta gatatacccg
     2221 tgtttcccat gatcacagcc actgtgactt ttcaggaatt ccgatgtgat gaatttgatg
     2281 ggtccatctt tgccatccct gaagactaca aggaagaccc aagtcgtttt cctgaccttt
     2341 aactgatccc gaagagcaag aggcttcagg tggcagggac tgaccttcgt tcagcagaga
     2401 gaacacatca gtgatgtgat gaaaaactga cctctaatga aacatccaca gcttcctgat
     2461 gtgccattca ttcctctttt taaagtcact tcctgtctgt gctagtttga cacccagtga
     2521 ccccaagacc ttcctatgta aagcagctgt gagtgctgtg atttgttttt aaagattttt
     2581 acacttcttg ttgaaatata tatcatatga atatatctat agctatatct aaaacacacc
     2641 tggaccatta acgtcaattc cgtgtctatg aagtcctttg aaatgtgtca cctctatcag
     2701 gtggcatgta taaatgttcc tttaaactat gttttcatca tcatgtatag ttctgtaatt
     2761 tgaatgttta atcaactaga aggaatgcag ttttctgagg tgaacagagc agtggtaact
     2821 attgaacagt tgcatttaca gcctgttgca atacattccg agggaacact cctgcaggga
     2881 atgcggtgcc cccaccccca ccccacccca ccccaacccc agcactttgc taacagttgc
     2941 atttacagct gcagtgcatc cggagggagg gctccctgca ggggatgcgg tgcccccagc
     3001 accttcatgc agctcatcct ggtgctcttt gtttcacctg aatccttttt cagtggaaac
     3061 tgtttgttac tgatcttcct ttcatagaac ctcaattttt tttcctaaac ttgagtttaa
     3121 aggtccttgt tctgttgata ggtacagtaa catgcttaca gctagccctt tccttagtat
     3181 cagcacttta aacaaattcc aaattttaaa cttgcttcct agtaagtgca cgtaagtcag
     3241 attattttta atggaatatg gatgcattgg tgtcaattta aaaaaaaaca aaacaaaaca
     3301 acgtattttg gacaattatg tatgtaacgc tttcaaaata aggtaaaaac attttatatg
     3361 ctacaatata tttgttatag gctaaaagtc cagaaacaca catgattgaa agttcatttt
     3421 tttcttttaa gtcacaggaa aataactatt gatttgtctc cagagtatta aaatcatgca
     3481 ttactcattt ttgcacctaa aatttgtcat atttattaca agatggttta aagaaccaag
     3541 aatgaaaata aattagaata atgttcaaat cataacagta tcatgttgta ttaaagactt
     3601 agctaaatgt ttgtgtcctg atgagatgtg tcatggatgc acctgtcagg ttgttataga
     3661 atgtttaaac tttgaccaag acttttattg aaagatgact tatttaaaat tccaaagtgt
     3721 cagccgtaag atatttatct ctttacagtt gcatctcaga tagtgatacc acctggcata
     3781 tgttgacatt ttatttttta taaaaatgat tgcattcaaa aaaatcaaag ccctaatcac
     3841 tccagtaagt gatctgttca gttttaagaa ctgagaagcc caaagctagc atgatggaat
     3901 ggaagttatc cctgccagac agtggctgat tcggtgactt agctactcaa ttaattctgt
     3961 tgtcagtcat gaggtccaag gttctgaaag gcaatgatca ttgttgcttt aggctccttg
     4021 gctcgaacat aaaggaaaaa atgataaatt tacagcttgg gatttagaat ttcttaacat
     4081 atgtgaatat tttgctgggt tacactggag ataggactac tgaaaattgt tgcactggat
     4141 tgtactactg aaaattgttg cactggattg tactactgaa aattgttgca ctggattgtt
     4201 ttgacttcaa tttttcttta atgaatagta gaatcagatt gtccattcca aaatgttttt
     4261 tctctgatca caaagaacaa gtgtatctct tatgatggtg ggaaaaaagg agttaattaa
     4321 tgcaaataaa cttttcacaa tattaaaaaa aaaaa
//
