LOCUS       XM_039108962            1937 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102553320
            (LOC102553320), mRNA.
ACCESSION   XM_039108962
VERSION     XM_039108962.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1937
                     /gene="LOC102553320"
                     /note="uncharacterized LOC102553320; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 88%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:102553320"
                     /db_xref="RGD:7624497"
     CDS             561..1937
                     /gene="LOC102553320"
                     /codon_start=1
                     /product="uncharacterized protein LOC102553320"
                     /protein_id="XP_038964890.1"
                     /db_xref="GeneID:102553320"
                     /db_xref="RGD:7624497"
                     /translation="MGQLVQKTREKDLAIISTSRDPLVTRRIQNCRIMKIQFGFRDDL
                     LGISRQRTKKMTTLVILMLIQGVPIKVQSELRWGIMSTFPLPMLVMYNAQVFLRFFTT
                     NKELGLAYLPLDSHIEQVKENRTIPLKGSLCFGIFNKTSFDLPCIMLSNESSAWLREA
                     TWGTGEEDIVANAIVLYGWWPYINSSTCPLRQPKLAPFCRGTQDEELTLPWTGCQSRD
                     SAWAVQNFFSFSPDLGGGVNFTTIDPRWSNNNPFDQWMLCGVNGSCTDLTPMAMLLGG
                     KGEKGRLSFSWTGNIQPSASVWTATHIKYKPYWSMGFNPALVCVWPPFVWIISNATKV
                     SKLNCTDGSCFYALCWDASQYSIAVVTRMPRFIPVPVETPGTLTLFRGKRDFWISAII
                     YEQFTKAANLSKTLSQHLLQNWTSDFEQTLRELRAAIIQNYGLSPPEAIVPVLQTPKD
                     CKEPIPIR"
ORIGIN      
        1 gattttcact tgccttgttg ttttccactg cttttgactt gaatatataa ggagatctca
       61 gtaaagcctt agtggcactc gctggaaatg ggtgacccat gtacatgttt tctttttaat
      121 ctgtaggccc acacaaactc ggggttacag gttagctttg caggtgtagc tgacaagtgg
      181 aggtcccacc gagatcggaa agaagggaga agctgacgga ccgctccagg gtgcacaaaa
      241 gaaaaggagc gaattgatca agcaaaccga aatgaacaat gatgaatgaa gaaatatatg
      301 gctacacaag atgtgagaat aaatgataga taaattcaca gctctaaaca aggcatttgg
      361 accattttct ctaaacttca ggaaatactg cagatgatgg aatgaacaaa tataaaaaag
      421 ctgaagtttc cgaatggcca tatcttttct gaagagaaac agaagaggag tagatctgag
      481 gcaaagagga gcagggaaac tacaggagtg gacgaaggat cctttgtgtc ccgcgtgtgt
      541 tcttgctggc gagacgtagc atggggcaat tggtgcagaa aacccgggaa aaagacctcg
      601 ctatcatcag cacctccaga gaccccttgg tgacaaggag gattcagaac tgcaggataa
      661 tgaaaatcca gtttgggttc cgggacgact tactcggaat atcaagacag aggaccaaga
      721 agatgacaac tctggtgatc ctcatgctga tccagggagt gccaataaaa gtgcagagcg
      781 aactacggtg gggaataatg tcaaccttcc ccctcccgat gctggtgatg tataatgccc
      841 aagtgtttct acgtttcttt actaccaaca aagaattggg actagcctat ttaccattag
      901 attcccatat agagcaagta aaagaaaata ggactattcc ccttaaggga agcctttgtt
      961 ttggtatatt caacaaaaca tcttttgatc ttccttgcat tatgttgagt aatgaatctt
     1021 ctgcttggtt aagggaggcc acatggggaa ctggtgagga agacattgtg gctaatgcca
     1081 tagttcttta tggttggtgg ccttacatta actcctccac ctgccctctc cgtcaaccaa
     1141 agttggcacc cttttgtaga gggacccagg atgaagaact tactttgcct tggactggtt
     1201 gccagtcccg ggactctgcc tgggcagtcc agaatttttt ttccttctcc cctgatttgg
     1261 gaggtggagt gaacttcacc accattgatc ctagatggtc caataataat ccctttgatc
     1321 aatggatgct ttgtggcgtt aatggtagct gcactgatct tacgcccatg gcaatgctac
     1381 ttggaggaaa gggcgaaaag ggacggttat cattttcctg gactgggaat atccagcctt
     1441 cagcctctgt ctggacagct actcatataa aatataaacc ttactggagc atggggttta
     1501 accctgctct ggtttgtgtc tggccgccat ttgtgtggat tataagtaat gccactaaag
     1561 tttctaaatt gaattgtaca gatggttcat gtttttatgc cctgtgctgg gatgctagcc
     1621 aatattccat agcggtagtt acccgcatgc ctcgctttat cccggtccct gttgagactc
     1681 cggggaccct gaccttattt agaggaaaga gagatttttg gatttctgca attatttatg
     1741 aacaatttac caaagctgcc aatttgtcta aaaccctttc acagcatttg ttacagaatt
     1801 ggacctcgga ttttgagcag acgcttaggg aattgagagc ggccatcatt caaaactatg
     1861 gactttcccc accagaagcc attgtgcctg ttttgcaaac cccaaaagac tgcaaggagc
     1921 caattccaat acgatga
//
