LOCUS       XM_006244214            3345 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC102553278), transcript variant X1, mRNA.
ACCESSION   XM_006244214
VERSION     XM_006244214.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006244214.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006244214.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3345
                     /gene="LOC102553278"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 99 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102553278"
                     /db_xref="RGD:7648507"
     CDS             552..2225
                     /gene="LOC102553278"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_006244276.1"
                     /db_xref="GeneID:102553278"
                     /db_xref="RGD:7648507"
                     /translation="MNTMTYDDVHVNFTWEEWALLNPSQKSLYKDVMLETYKNLTAIG
                     YNWEDHYIEEEFQSSRRYGRHETGYTGEKPYECTHYGTGFASHGHLQRHKGTYTGEKP
                     YECKQCGKAFAWNCHLQIHKRTHTGEKPYECDQCGTAFASHGHLQRHKRTHTGEKPYE
                     CNQCGKAFSQHSSLQVHKRTHTGEKPYECNQCGKAYARHSHLQRHKRTHTGEKPYECN
                     QCGKAFAYHNSLQYHTRTHTGEKSYECKQCGKVFVCRDHLQIHKRTHAGQKRYECKQC
                     GKVFAFHSHFQRHKRHIGEKPYECNQCDKAFASHNNLQKHIKRHTGEKSYKCNQCDKT
                     YAHYSHLQTHKRIHTGEKPYKCNQCGKAFSQHSSLQVHKRTHTGEKPYECNQCGKSYA
                     RHSHLQRHKRTHTGEKPYQCNHCGKAFAYYNSLQYHKRAHTREKSYKCNQCDKAFASH
                     SNLQKHIRHTGDYKCNQCVKTFTHHSHLQRHKRTHTGEKPYECNQFGKIVAQHSTFHS
                     IKKAHMGWRDGSVVKSTECSSRGPEFNSQLPHGGSQPSVMESEALFWCA"
ORIGIN      
        1 cacttgtggg acaaattgac aactccactg caaattcagt aaagaactct gcaagctatc
       61 tatcctgatt ccaggaggaa gaagtgccag gtatactcct acattgctac ttggtgaatt
      121 cagcttcact gtccctaaga gaaggagctg gcagctgagc tacggggggc tgaagtggtg
      181 ggtcctcccc cgggactagg cgggaagaca gtcgggtagg ctattggaag gcaggcacaa
      241 gtgctagagt atgcagcctc tgtagatctg caaaagtttt ggccatggac aagaaacctg
      301 ggcgggaaaa ctttatcctg tgttccttta agacacaaaa accctaaggg aggtgttcgt
      361 gtcactcagg actcactgac caatcagagc tccaggcggc tctgccagta agcccacaag
      421 gagggttctt ccggatgcca tgttgcgagt tccctgtagc tgagaggtct tgaatggttc
      481 tgtgtgatgt gctctgagcc ctgctgctgg gtgctgtgag gcgcgcacag gcaagctccc
      541 gaagttgcga catgaataca atgacctatg atgatgtgca tgtcaatttc acttgggaag
      601 agtgggcttt gctgaatcct tcccagaaga gtctctacaa agatgtaatg ctggagacct
      661 acaagaacct cactgctata ggctacaatt gggaagacca ttatattgaa gaagaatttc
      721 aaagttctag aagatatgga aggcatgaaa caggttatac tggagagaaa ccctatgaat
      781 gtactcatta tggtacaggc tttgcaagtc atggtcatct tcaaaggcat aaaggaacat
      841 acactggcga gaaaccctat gaatgtaaac aatgtggtaa agcctttgca tggaactgtc
      901 atctccaaat acataaaaga acacatactg gagagaaacc ttatgaatgt gatcaatgtg
      961 gtacagcttt tgcaagtcat ggtcatcttc aaaggcataa aagaacacat actggagaaa
     1021 aaccttacga atgtaatcag tgtggtaaag ccttttccca acacagttct ctacaagtcc
     1081 ataaaagaac acacactgga gagaaaccct atgaatgtaa ccaatgtggt aaagcctatg
     1141 cacgtcacag ccatctccaa agacacaaaa gaacacatac tggagagaaa ccttacgaat
     1201 gtaatcagtg tggtaaagcc tttgcttatc acaatagtct ccagtaccat acaagaacac
     1261 atactggaga gaaatcttat gaatgtaagc aatgtggtaa agtctttgtg tgccgtgatc
     1321 atcttcaaat acataaaaga acacatgctg gacagaaacg ctatgaatgt aaacagtgtg
     1381 gaaaagtctt tgcatttcat agtcatttcc aaagacataa aagacatatt ggagagaaac
     1441 cttatgaatg taatcagtgt gataaagcct ttgcaagcca caataatctt caaaaacata
     1501 taaaaagaca tactggagag aaatcttata aatgtaatca gtgtgataaa acctatgcac
     1561 attatagtca tctccaaaca cataaaagaa ttcatactgg agagaaaccc tacaaatgta
     1621 atcaatgtgg taaagccttt tcccaacaca gttctctaca agtccataaa agaacacaca
     1681 ctggagagaa accctatgaa tgtaaccaat gtggtaaatc ctatgcacgt cacagtcatc
     1741 tccaaagaca caaaagaaca catactggag agaaacccta tcaatgtaat cactgtggta
     1801 aagcctttgc ttattataat agtctccagt atcataaacg agcacatact agagagaaat
     1861 cttacaaatg taatcagtgt gataaagcct ttgcaagtca tagtaatctt caaaaacata
     1921 taagacatac tggagattat aaatgtaatc agtgtgttaa aacttttaca catcacagtc
     1981 atctccaaag acataaaaga acacatactg gagagaaacc ctatgaatgt aaccaatttg
     2041 gtaaaatagt tgcacaacat agtactttcc acagcataaa aaaagcacat atgggctgga
     2101 gagatggttc cgtggttaag agcactgagt gctcttccag aggtcctgag ttcaattccc
     2161 agctaccaca tggtggctcg caaccatctg taatggaatc tgaagccctc ttctggtgtg
     2221 catgaagaca gctacagtgt gttcatatgt aataaataaa taaatatttt taaagtacat
     2281 ttttgagaga aactctataa atatactgta aggtaaaacc tttgcaggtc aaagtcatct
     2341 tcagaggcat aaaagaattc atactggaga gaaacctcat gaatatgttt aatatggtga
     2401 agcctttgca cttttaaatt gtcttcatca acttgaaagt attcatactg cagagaaatt
     2461 atattaatgt aagcagtgtg gtaaagcctc tgtgttatgg gtccacttag atccaacaca
     2521 agttaaactc cagatcaatg caaatggcaa gaattaattg taatcaagct gttactgatt
     2581 aactagtgct ttagaacaca ttctggagtt gaattgcaac ccatcttaca gagcttttaa
     2641 gcttgaaaag taaaaacatc tatgccaagt tacaactaca tttttccacc aatcaggatt
     2701 tagtgatagt agctttcctt atgtgactga accatgccaa tggatacatc atattcattt
     2761 attcttttgt ggttaggaac cacatgtttg ggggaacaaa agatgttaat aaatgctgta
     2821 gttaggaact gtcatgtttt agagagtaga agccatggtt agtttgatgt gctatggata
     2881 tgtgtatatt atttgatgtt cattgcttct ttatgttcat attagttacc atttgatact
     2941 tcctcttgaa gtactgcctt ccaacggaat tatctcaaga tggtagataa tgtaacagca
     3001 atgagattta ttaaatattt ttctggggtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     3061 tgtgtgtgtg tgtaatttga ttattgtttt gtgggccatg atggatagat ggagactgga
     3121 aaacaacttt ctactttgac catctttcta tggtgataaa ggtcaggttg ccagctttgc
     3181 acactacaga aatttcccgc tgatccatct cactgatgtt caaagaagat tagttaaaac
     3241 atttcattag taaaatattg tcttcttttc agattgtaaa catattgtca tctaaggatc
     3301 gagaacaggg tgactttaat aataaatcat atttgcaaat gaaaa
//
