LOCUS       XM_039098336            7702 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102553183
            (LOC102553183), mRNA.
ACCESSION   XM_039098336
VERSION     XM_039098336.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..7702
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7702
                     /gene="LOC102553183"
                     /note="uncharacterized LOC102553183; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, 1 long SRA read, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102553183"
                     /db_xref="RGD:7709399"
     CDS             1..1350
                     /gene="LOC102553183"
                     /codon_start=1
                     /product="spidroin-1-like"
                     /protein_id="XP_038954264.1"
                     /db_xref="GeneID:102553183"
                     /db_xref="RGD:7709399"
                     /translation="MSASQLAEKASRAGSGPGRQRGPDPREPLSARGAAASPPPGPQV
                     ATELRGPRSGPARKAGARPAGLLRARRALRPEPRHRSGWGAVVGGARCTGTPTPASHC
                     LCLAAGTRGREPPPPLLPPPPPPGPRTPAGPALPCPAAPPKSPRGASPRAPPPSRGSP
                     AAARGPRRRGRPRFGGSGGRRRRRRKKRERESLAQGAGERDAASEQGAGAGSAGGGGG
                     DRAREPGGGRTSPMQSSPGAPRSPASGRRREEEEQAAAAGRGEKKKKKEGKVATYAVA
                     PPAAAAAAALLASAAVAGAGGAFNPEKRRSGRGAHQGSSGGWRGAAAEDALLAAAAAA
                     EELERARRSPGREAAAAGEPEPPPPLPPSSMVGGEFTAPGAGRGHGGEAAAAAAAALG
                     CNWDAKQAAAAAAAAAGRRRRRRRRRRRRLQRSEGTRWKWELMSEKKKKSLDLYSAN"
ORIGIN      
        1 atgtctgcct ctcagctggc cgagaaggcc agcagggctg gctccggccc tggccggcag
       61 cgcggccccg acccccggga gcccctaagc gcgcgcggcg cggccgcctc gccccctcca
      121 ggaccccagg ttgccaccga gctccgcggc ccccggagcg gccccgcgcg gaaggcaggc
      181 gcccggccgg cggggctgct ccgggcccgg cgcgcgctcc gcccagagcc ccggcaccgc
      241 tcagggtggg gcgcagttgt ggggggggca cgctgtaccg ggacccccac ccccgccagc
      301 cactgccttt gtctggccgc ggggacccgg ggccgcgagc ctcctcctcc tcttcttcct
      361 cctcctcctc ctcccgggcc ccgcaccccg gccggccctg ccctgccctg cccggcggcg
      421 cctccaaagt ccccgcgcgg ggcctcgccc cgggcgcctc caccctcccg ggggtcgccg
      481 gcggctgcgc gggggccgcg gaggaggggg cggcccaggt ttggcggcag cggcgggagg
      541 aggaggagga ggaggaagaa aagagaaaga gaaagtttgg cgcagggggc aggcgagcgg
      601 gacgcggcga gcgagcaggg cgcgggcgcg gggagcgcgg gcggcggcgg cggcgaccgg
      661 gcgcgggagc cgggaggggg caggacgagc cccatgcaaa gcagcccggg cgccccgagg
      721 agccccgcgt ccgggcggcg gcgggaggag gaggagcagg cggcggcggc gggaagagga
      781 gaaaaaaaaa aaaaaaaaga gggaaaagtt gccacttacg cggttgctcc tccggcggcg
      841 gcggctgcag cggcgctgct ggcgtcggcg gcggtggcgg gagctggcgg cgcttttaat
      901 cccgaaaaga ggcgctcggg ccgcggagcc catcaaggca gcagcggcgg ctggcggggg
      961 gcggcggcgg aggacgcgct gctggcggcg gcggcggcgg cggaggagct ggagcgcgct
     1021 cggcggagcc cggggcggga ggcggccgca gccggggagc cggagccgcc gccgccgctg
     1081 ccgccgagca gcatggttgg cggggagttt acagcccccg gagcgggcag gggccacgga
     1141 ggagaagcgg cggcggcggc ggcagcggct ctaggctgta attgggatgc aaagcaggcg
     1201 gcggcggcgg cggcggctgc ggccgggagg aggaggagga ggcggcggcg gcggcggcgg
     1261 cggctgcagc ggtcggaggg gacgcgctgg aagtgggagc tgatgagtga aaagaaaaaa
     1321 aagtctttgg atctttattc tgctaattag tttcctgcaa aaaatggctg tgattaattc
     1381 agtgcgcatg tgcttcatta cccaggcacg acgggaaggg ctaattagcc accttctgga
     1441 tcaataagat tcagcaaaaa agaaaagggg gaggtggagg gaggcagagg ggaggaaggg
     1501 agaaaaaaaa aaaaaaaaac caggggaaag tgatgagcag ggcaaggaga gcaggaagag
     1561 aggatgggag aaaaggctaa gcagagggag agaggcacca aaagtttatg catgtattaa
     1621 aaacacatac acacacacag gcacacacac acacactcac tcacacacac acacacacac
     1681 acacacacac gcacacacac acactaccgt caagtgaaat gtgaagcaac aatagagacc
     1741 tgactaagat ttttttaaag attttttctt tttttctttc ttgtaatttc tttttctcgt
     1801 tccttttttt ttcctttttc taataaaaaa tgcaacaatg cttaaattaa gtaggaaaag
     1861 aacatctggg gggcgggggc gggcaatagt ggcgtgggac agcttaaaac agaggtttta
     1921 agggaaagac cagaggctta gaatggaggc cactttaaat tgcaaatcag ggattttttt
     1981 ttttttaacg gaggaaaatt aactctcctt aagtcagagg atgaaggaag aaaatatggg
     2041 aaaaaacttt aacacatacc atagactaga caaaaatctg ctcactttat tttctgacct
     2101 aagatatagt cagtgtgcgc tgaatcctta gaggagcaga ggatggggga cgaccaggag
     2161 aaatgaacgg agaaaagtga ctcagaactg ggacggggtc gagcttagga aagacaagaa
     2221 agggaaaagt tgccttcgaa aagaagtcca actttccacc tctggactta agagaaaagt
     2281 aaaatcaatt ttctcgtgta gaacctggaa agcagatgct tttaaaacac aggaagctat
     2341 tttgccatca aaagcagggt tgtaataaaa gcagcgaaaa ataatttcag acaaaattca
     2401 ttttaaaaaa ggaaagaaag aaagccaata tgtttaaata ccgaagaaag gtctagagtg
     2461 tagaaagagg ggacattaca tacccccatt cctaatggaa aaaaaaaatc ttacagctac
     2521 ctccaagagt ttggagcagt cttgaagcca aagggcttga aatgagggga tggatttcag
     2581 ataaagacta ggcacagcgt atcccaccag agcccaaagg agattcccta gaatcaaaga
     2641 cagcaccagg gaccctgcta ctttactgat tcccagtaca tcaaagctat cactcaggct
     2701 gggtatggta cctccaaaaa gcaagcaaat aaatgcagga agaacaggtc tctctctctc
     2761 tctctctctc tctctctctc tctctctctc tctctctctc tctctctctc tctctctctc
     2821 cctccctccc tctctctccc tctctctccc tctctctcca gtttcagcgc acccctgcta
     2881 ctgagtactg aatacattct ttaatgacaa gtttgtattt atataaatcc tacacgagaa
     2941 ctagtgccac tgaaattaca ctgtctgtga tgaaataaaa tgcactttaa ctgatttgcc
     3001 aagtaaaccc tataacacca ggtagggagg aagctcgcta aaacttattt ttcttgaggg
     3061 tttttttttt tgtcccagcc taccaagatt attcatctaa gaaggaattt gggaattaat
     3121 caggaaatct gtttgattag aaagtaattc ttcattttga aagattgtcc agtgttctta
     3181 agaccattgc agcttcttag acaagactag ggggagaaaa ccggtttagg attttacctc
     3241 atctaatcct tctgaattca ctcggggaat aatgctgttt tatttaggcg gggcatgggc
     3301 gggggtaggg ggagataaaa tacatttaga aaaatcaggg gtttcctctc tatgagccaa
     3361 atcagggttg ctattcaaag ttttcctggt agcttttcca tgcgggacag ctgatcaata
     3421 aagccaagtc cagcctggct tgctacaggt ttcaccagtc agtgcttgca aaacctttgt
     3481 cattttctaa aaataaaaaa gctaaaagtt attgtagaag aaggggcttt tttttgtccc
     3541 ctgcacaatg tgtcttttgt gaggttaata ccattctggg ctcttgatag ccctggacaa
     3601 tggagactct ccaggagcgt gtgaagaccc tggctttttt ctttctggct cttttttttt
     3661 tttttttttt tttttttttt tttttttttt tggaaggatg aaacattcct acagtccaaa
     3721 tacaacctct gctttgatta aataaatatt tatctttatt gcacccattg tatatttttt
     3781 taaccttcgg tttgtccggt ttctgattat tattttaaaa ttttcattgg caacagttaa
     3841 tctttttttt ttttcccttt cagtccaaaa tacaggtcag tgtaaagtgt agctgacaga
     3901 atgaagactg gtaaattctg aatttttcca taatgcatca gagatgcagc agaactaaat
     3961 ttcttcttgg agatgttgaa aaaccagtta agtaccatat acttattttc ttttaaaatg
     4021 taaatggcat gagaagtgaa cttgtagctt ctgtcttatg tttaaataaa ggtgtgaagg
     4081 aagtccctgt ttagggaaaa attctggata taaatctatt tcatgttgca attataggaa
     4141 aatgtcagtt taatcttgta aatacttatg ctaattttac tgagagaatt cattctaagg
     4201 agaagtacca atcgtgtgtg attcagtagt gcttagatga taatccagca tctctatgga
     4261 ttattttata tacaaaatgg ggagtgccta agatccagaa tctaaatcct ttatttagca
     4321 ggaaaggagg cagaaaattt tagaccaaac tggtttttaa ggcattttta cggtggggag
     4381 ggaaagtgga atggaggcta agcagtgcac tgctgttttt ctgcctctct ctctcaaatg
     4441 aatggctata gataacaaag gtatatgcat aaagcggtac ataaatatac atttgaatga
     4501 cttcacatgc cttgtcatct ctgtgtgggt atctgtgcac acaaacagac aaggtgtgca
     4561 caaatgcaag tgctgagcag agatattagg ggctttttcc tcattggggg atttatgttt
     4621 ctgggtctgt tttaagccat ttctttgaaa atataacata gcaatgttgt tttaatgaac
     4681 aagatgtaga tggtgaatct gagtatgaat ctgttcccct acggttttca gaatatggga
     4741 ttgtagatat tatttgatcc aagggttaaa tatgcaatgg accaatgtca gggggagagg
     4801 gggggtgtgc tagtatattt ctcttagagc atagctttgg accctaggaa tctccccaac
     4861 agggtgactg gggacacagt aaaaaggagg gggcgttgaa actcagtgtg gagtcagggg
     4921 aggtcgatag gacgagcctc tgaagatcca gctcacgatg taagagaagg gttggagggt
     4981 gaagaatgtt cggtctcctt ttaaatgtgt attgttattc taagtctatt gtatgtacgt
     5041 gttgccgtcg tttcatttgc cacgacaaca tatggattcc ataaatacag acatgccgaa
     5101 gtgcatctgt ctgagtagtt aacacgatcc aaacatccct cctcattccg ctaactccgc
     5161 tcttccttgg gattcctggc agtgcttgtg cccaagatcc cagcatccct taatctcacc
     5221 cttttgtgag actacctttt gtggtctctg caccgtattc aaggtgcaaa gctatggaag
     5281 cggactgcta gcagcaattc agcagtaaag tctctgccaa aggacacggg gcctctgggc
     5341 taacggggag gaaagggtta agctgccaga gcccaaggaa ggggctgtgc tcatcccaga
     5401 gcgaggtgca gccaccggca gctgtgattt aggggtcaag tccgagatca cctttctcct
     5461 gcctctggaa atggcagaag atggggaagg gggtgggggt gggggtgggg gctggaaaca
     5521 caggagagaa cagcaaccag gcacaagcac atggcgttcc atccgttccc tcgcctggtc
     5581 tcagtccccc tcctgacaca caccccctcc cctagacaaa ctggacagat ccctttcact
     5641 tctagggcag tgggatattc tgagtatccc aagtttctct ctcagtagct ctgtccctac
     5701 catgaaacct ctgtgtactg gagttctaag taccgattct gaaagtttag ccttagagcg
     5761 gcagggaata agaagccaat gtaggtcaaa acttccttct cctttgcaga cgactgggat
     5821 gcccctagca ggaagaagtt tgaacatggc cctctctgcc ccagactcaa gtcatacatc
     5881 cactcctaca gtcctgagtg ggtggacacc cgtggggtct gttacacgca gcttcttgct
     5941 ttgtgcctac atttttggtc aaaaaatttt ccctcccatc tcacgaagcc cccagaacac
     6001 ttttcatcca aaatattttt taagcctgaa agatgaccct aagccaaatt cagatttgtt
     6061 cctaagtcat ttcactagaa aagagcaaaa tgtcaaagtc ttctgcgttg gcataaaggt
     6121 agcatgtgga gtcttagtac ccaggtcttg tgagttctgg gggtgcccag ggggtcgggg
     6181 gagggggctg cagctggtgt ccatagggcg ggtgttagcc aagaatgagc ttcccaaatc
     6241 ctcccccagg aggctggcca gttaggaaac tgagagaagc atagttcttt ccgaaagtta
     6301 caataagaaa aaaatattgt gaggggtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     6361 tgtaaaagac ctggctcaga ctgacaggaa gaccctggtc tctggaggag aggagacaag
     6421 tggaagatac aggaatgagg aagtgataga agtttaaaac aagacgatct cccattctct
     6481 cccgggtctc cctcagaggt gaaggcaaat caccctgatc caacctgtgc ttccagggcc
     6541 aagggccgcc cagctgatcc aaaggcagct aaggtctgtc ttttccagtc tgtttggccc
     6601 taaccttgcc agagcctcca gacctcggag atcaaaccaa attggctgct ggaatttaag
     6661 aggtttcagc cctggagcaa ggaggagggg acaatctccc ctccccccaa ccccctttaa
     6721 ctcccaattc aagagacacc acaagccaca tttgagtgtc atccccagtc gtggattatg
     6781 ggtatagctc attctttctt cctatttctc agaagtaaaa accttaaaaa attagtccca
     6841 aacttagagt gccggagtcc ttgaaatagt tcctaatgat aaaacctgcc ttcattttca
     6901 gtacctatca gattgtgaaa aatgcagggg taacgttgga ttccccattt ccctccattc
     6961 ctttgtaaca aaaatctagg gggtggtggt ggggaggcag gaggagtgga gtccgttcgt
     7021 ggctctcctg ggttctgcac caccaccaca cgctagattc ccttttggtg acccggtacc
     7081 agaagtctgc atggaaccaa aacccggagg cgggctcgag gaggagacag aactaacctc
     7141 atcacaactc aacaaagtga acaactgcaa gacagacacc cttggttgga caacgtgcgc
     7201 tttaggaatt cccaagagca tataacttgg ggaatgatag aagcttcttg cctacccgcc
     7261 acagcctaaa gaaaaggaag ccatgagaag agccggccgg gatctgttgg aggtgggggg
     7321 tctagggagc agagctgtga gctctatcag gggtggcctg gggagaggat gcccatggtg
     7381 gcacgtgcat tgttgacagg caagcatgtg ttaatggagg gatgagtggc cgagcaatcc
     7441 cccaatgctt gcatttcttg caggcatggc ttgtttaatg atgagggaat tgaatgacgc
     7501 acacacgcgt gcatgtgcac acacacacac acacacatcc tttttgccgt ggctgagaaa
     7561 tgtaaaaaga aacctatatt atatatctat atatgttcag aaaaaagtat gcatttttcc
     7621 ttgagaaata gccaatgcca taatatcttt gatttgaggg gcgagggaat ttttgaagta
     7681 aaggaaatca gtgggggacg aa
//
