LOCUS       XM_039103363            8655 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102553085
            (LOC102553085), mRNA.
ACCESSION   XM_039103363
VERSION     XM_039103363.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..8655
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8655
                     /gene="LOC102553085"
                     /note="uncharacterized LOC102553085; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 99% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:102553085"
                     /db_xref="RGD:7631924"
     CDS             1..828
                     /gene="LOC102553085"
                     /codon_start=1
                     /product="translation initiation factor IF-2-like"
                     /protein_id="XP_038959291.1"
                     /db_xref="GeneID:102553085"
                     /db_xref="RGD:7631924"
                     /translation="MVPNSNRAGARKAAGLGSPGCTSVRSPEPPSPLAGTEPQPSRPN
                     SWAPGASGDPQGRRRLARAASTQGPGRDQAAPGPLPRRRPAAQWGAGRPPTPPRPAPG
                     PAPATRPRRAPLPGPRVAAAPGRDGQSWAPAEQRQRSAAGSGARAGRHGAAVPHHVGV
                     LRTSPLLLRLRSEWTAAAAAAPLTGSPGSRSCAVQRPAERPGCRRRRARAPGWAAWPA
                     GIRGASGRATRPPGLRTRAETCAAGGRGHSEDEAPGPCLRPYSGRPRHGRVPSSVRS"
ORIGIN      
        1 atggtcccta actcaaatag agcaggcgct cggaaggcag caggtctcgg gtcccccggc
       61 tgcacttccg tccgcagccc ggagcctccc agtcccctcg cggggaccga gcctcagcca
      121 agccgcccca actcctgggc gcctggcgcc agcggggacc cgcaaggccg acgccggctc
      181 gccagggccg ccagcaccca ggggcccggc cgggaccagg cagcgccagg cccgctgccc
      241 aggcgccgcc cggccgcaca atggggcgcg ggccgtcccc caacgcctcc gcgcccggcg
      301 cccggccccg ctccggcgac taggccccgc cgcgctccgc tgcccggccc tcgcgtagcg
      361 gcggcgccgg gaagggacgg gcagagctgg gcgccggctg agcagcggca gcggagcgcg
      421 gcggggtcgg gggcccgggc cgggcggcac ggcgccgcgg tgcctcacca tgttggtgtc
      481 ctccggacct ctcccctcct cctccggctc cgcagcgaat ggacggcggc ggcggcggcg
      541 gcgcctctca cgggctcgcc gggctcccgc tcatgcgcag tgcagcggcc cgcggagcgg
      601 ccgggctgca ggaggcggag ggcgcgggcc ccggggtggg cggcctggcc tgccggcatc
      661 cgtggcgcga gcggccgggc gacccggccg cccgggctgc ggacacgcgc tgagacctgc
      721 gcggctggcg gccgcgggca cagtgaggac gaagcgccgg ggccctgcct gcgcccctac
      781 tccgggcgcc ctcgtcacgg ccgcgtcccg tcctccgtgc gctcctaata gctccacgtc
      841 agagttcccg ggtatccatc ctgaacaact ctttcccagt ttcaacggat gaattcaatg
      901 tggagaccat aaccactgaa aggagtccac agagcaaggc tgaaggtccg tggttcctct
      961 gtcatctacc aggtatggcg gaagaattct attattgaac tattactgct tcctgtcttc
     1021 agtgaatgga tagcacccaa ggtataaagc tgtccttcta ggacttggta ttctcaagta
     1081 caaatgaaaa tattgtgtta attctaataa attccacaaa aatcctgttt gtttgattcg
     1141 ttgctagtga actaccccaa atcaggggag tagccaggtt tccacaccta taatcccagc
     1201 ttggggaggc tgaggcagaa gaatcttgag tttcaggcca gctagagcca cacaattgag
     1261 acctcaactc acaaaacaaa gaaaagaatt caggaaaata taatcagttt tacctgtcac
     1321 tctgggtgtg tgacgttcat aggccaccac tgtttcacaa cgtaacacta caagtgtggg
     1381 gtaatgggaa acttttaaat tcacagtaac atttaaaagt tttcaaaggt ctcacctatt
     1441 atttaaccca aatatatatt aatgtaaagt gttacggaga tgctttgtat tctgttttcc
     1501 aggtaggatt gtgttgggtg agtactcctg cccaaagcac atcctaagtc agaacacttg
     1561 gtcacagccc tggtgctgtt tgcaggaata gcccctagaa gctcaacagt cggaagttag
     1621 tagtattatt gagatttttt tttaaatatg tgtgggtgtt tgcgtacagt atgtctgatt
     1681 cttgaagctt agaaataggt gttgagcctc ctgggaatgg actcagacag gtgtgagctg
     1741 cccccacgtt tatgcaggaa agaacctggg ccctcaggaa gagtattctg tctcttcact
     1801 gaggcatctt tccagcccca aagttaatat tctcaccttc agaaaatagc aaagtaaatc
     1861 tggaatattt atgtctggcc aataggaagc acagacattt agcacttggg aagctaagag
     1921 agttcagttg gaataaaacg ttggacaaga ggaaaataaa aggcaatctt tgtaaatctc
     1981 tcagagatag aggtgcctac catgcacaaa gctctggctg cttcccccag caaccatagt
     2041 caggtgtggt gacatacctt ctaatgcagc actcaggtgg ggcaggagta tcacgtgttt
     2101 gtcatcattg gctatatact cagggcagcc tcggctacat gagattctgt ctccagtgtg
     2161 agtgcatgcg tgcacaagtg ggtgtgtttg tgtgtttgag tgtgaatgtg catgtcagtg
     2221 tgtgtgtgtg tctaagtttt caagagtgtg tgtgttccct tccttttgct ttgctagtgt
     2281 atgactattt gctgtgtttt catggatgta gttaaccatc gtggtctgga gatttctttc
     2341 taagatcttc tgtaaggatg gatttgtata tagatgttta catttgagtt aattctacct
     2401 gccttgaata tgtatcttct ttttaaaaag atacatattt taggaaaagc acatactgaa
     2461 aacttttttt caggtactag gggattgaac ctaagatctt atgtatgcca gacaagcaaa
     2521 ccgtctactg ctgagctaca ttccagccct ctttttactt tttttttttt ccgagtcaga
     2581 atctgcttaa gttgtgaagc ccaaccttga actcacccct aattggccct gaccttgtac
     2641 cttcctaccc acactggata ataatttcaa agggaaatag tttcaaagaa gttatttagg
     2701 acaaatggga agagtcaaga attaaatttc ttcgcaaaca ttagaaaatg gagagaatgc
     2761 aaataccaga ctctggttag gctaaacaag cgggaataat aaaaataact gaaagcagcc
     2821 gggtggtagt gcacacctaa tcccagcact caggaggtgg gggcaggcag aactctgtgg
     2881 gtttgaggtc agcctgctct ccagagctag ttttaggata gccaaggcta cacagagaac
     2941 acccgtctgt ctgcttacat taggagacga tcattttgag gacatatcta tacagaaata
     3001 aatgccaatg agaaaaggca cagcccagtg gacttaacac gtgaaaatct aggaaccttt
     3061 taatgtagca tgagagacaa aggaggacct tttagctcaa ttgagggagg aagtgactgc
     3121 tagattcctc atgggtggga tgtggcagcc ttaattgacc agcagtgaga caggctgtga
     3181 ccacagccta ctaggatgga cccaaactga attttagaga atttgatgtt tgacggttgt
     3241 ctttgctttt gtctgctgca ctgtggcaga agaggttggt tttcttgata atcctgacta
     3301 cagatgggat gggtggggtg gatgtcgact agggaggaag gaagcctgag gcctgtggct
     3361 gggcaggcct gctgagctct ggtgtgaggg ggaagacagc acaaccagca ggtcaggcct
     3421 agctggaaga agcagccatt gggaggggtt gagagaggtc acatatattc ttcatccatg
     3481 gacccggccc tgtggagtaa gaacagcccc acacttgtca ctgagaatga gccgggccgc
     3541 atgccttggg tattctgtgg ctcacctctc aggctcttag tttactagca ctgagccagg
     3601 gtcaggttgg ctgactgggg cctgagagag gctttggctt atttcaggtg ggggtggggg
     3661 tgggggtggg aatacgcaga agaactaata agcagctttg gtaagtacaa agtcaccgtg
     3721 gttggaattt tccatggcac ctctgatact tgaaggtgag atttccttag ttttttgttt
     3781 gtttttgttt tacaggtttt tctttgacaa cttacaaact ggagtatatc agttcgacct
     3841 aagcctgagg gttacatgaa ctagtcacag aagggagata tgtcccattt tgtttatcag
     3901 tacatgactg ggccaatgac acctcccttc tctgaggtcc ccttcccctg actagaaaca
     3961 aagtctacac taaatacttg gtccttccta tgtcaaagtt tctagaagta tagctgtttt
     4021 cagtaagtca cctgtttcaa cacactgcac tctagaataa aaacacacag ttctggcaga
     4081 cctgcccaag ctactcaatc aggagttctg tgtcgagctc tatggagtct gtgtgaggtg
     4141 gggtctctga gaaaactgca agtgctgggg aagagctcgg cacgcagaag gctaccttgt
     4201 taacaggaga ggctaacttg agttgcccga atctgtgctt gaaccaaact gatcatttta
     4261 tctagaggtg ataacttcct aacctctttg gccccagggt cctcacctgt aaaacgccca
     4321 cctcaacctg tgtgaagggc aaagaagaca gtgcaagctg acaggcagtg ctgctcatcc
     4381 cagaagaggt gacgcgagct ggggtttgaa gaataaacag cagtaaatat caagccaata
     4441 tgattttgtt ctgtttacaa aaccacaagt tttatgtgcc aagatcagtt aatttggaaa
     4501 gaagccgttc ttttcgattg cattatattt gtactatact gcacttcaca aacggaacaa
     4561 taacccaggc cagtggtgat cataacaagt gctatggatg catggcgaag gtagcgttgg
     4621 ttaagtttga tctcttgaaa cactaggttg acagttgaca gattcttctg acagccaatt
     4681 ggaccttggc atctggagac actaaacagc agtccacttg gtcattcata aatgtgtgca
     4741 tcactatgac gtatctcctc caggtctcaa gagaatgtga taagctggga tggcagcggc
     4801 cagcgatgac tccgtgatac agaacagtag aagtaggtag cacactcctc ttctgtcagt
     4861 gatgccgagg tccatggcct cagtaacaat gtctgccacc agtagccaca cttaaagctg
     4921 cttgctacta tttcaagaca gggtttacta tacagcttga ctgttctaga acttttgatc
     4981 ctcctgtctc agccttccaa gtgctaccat ttctagcata ttaggtaata tgcatctgtt
     5041 ctgatcagca acaagataca gtacaagact ttggacatgt tctcacatga tgaccaccaa
     5101 ttagacagtg gtcaaactag tgattgagga ctggcttatt ccttaacaaa accttgggag
     5161 ttggctgaga ccatggttta gtcacagagt gcacactaaa atactaggtc caatccaagc
     5221 accaaatgat tcatggaaat tccacttaca tgtctgcaga aacatgccat cattctacga
     5281 gccaatatcc tgactccaga acacaaaaga aaagacaaat caggaaataa aactaaagac
     5341 taatatctct taaatataga tacaaaaaaa tactttgaac tatattagaa ggctgggcat
     5401 gatgtcatat tcttgaaatc atagcacttg gaagactgag acaggaggaa cacaagctcc
     5461 agaacatcca agcaatatag taagaacctg tcttcaagta ttagcaaaca tcttggagtg
     5521 tagctactgg tggcaggcac tgtcttcatc gatgccctga actaaatgcc cagcacagac
     5581 aaaaacttgg cacattaagt caaaacgtat agtatgacca agtgccataa attcaaagtt
     5641 gattttatca atgaaaatca actaaaatct tatatggctt taagagaatc aaagatatac
     5701 tttataatta tgcagaaata gcatttaata aaatctgaca cccattcatg atatatgctc
     5761 tagatgaata gaactgatgg aaagaatatg tacatatatg tgagcttgtt aagaaaaagt
     5821 tttattagag tgacttacag actgtggtcg agctattctg aatgtctcct gacaggccca
     5881 gaacctagtg gttcagttca tgaggttgga tgtctcagct cagcctatgc tgaaatcctg
     5941 actaagttgg ttctaatggt attgaaccat tccattagaa tggttcacag caagaaagaa
     6001 gaacttgcct agtgagtgtg agggcaagca ggccaaaaac aaaggtttcc tccttccatg
     6061 ttctatgtag actatcaccg gaagttgtgg cccagattta gggtgggtct tctcacctta
     6121 aatgatccaa tcaagaaaat ttcttcagaa gcctgcccag ctgcttgggt tatagttgat
     6181 tccagataaa gtcaagttga gaatgaaaat tagccaccac aagcctaccc cttgtcaact
     6241 tgacatacaa tcacatctcc ttatgtatgc ttaatttaca aatggaaaca ataaccagat
     6301 tataattaca cttaatatga tgtaactcct ccacaaacaa ctacaaagta tctcacaccc
     6361 acctggaaat gaatgataca ttttagaata tcccttgagg gacattcttt aagtatctta
     6421 taacttaact atgcagccac tgataatatc aactggtatc ttgttacata ataaatagga
     6481 aggaaaaccc aaatctgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     6541 tagcaggtct tggatctcag aggagcgacc cataccttca ttcctttagg gtctgaattc
     6601 tttgacatct agcttcaata gtgttgtagt ttcctattga cttcaatcac aagatattgg
     6661 aacaccaaga gagactttct catgaacctc ctacactcta gacatgatct ttacttcctt
     6721 tgaggagaac aaatccaatc cccctccccc ataatctgga tcaatcaccc atcctaacac
     6781 agatattcct ttcttagccc gttgacttaa aagcataaga aacctaaaat ggtcagggga
     6841 agtatgagtt tccagttcaa tggaatgttt attttagctc ctggcaggag tgctcaccca
     6901 tctagaacca aaacttctag gccatcacaa cttatggtca tgggaacaag aagcaaaatt
     6961 ttcctaatga gtctctaggg gtggtagtgg aatgattctc atttccaccc ctggattcct
     7021 agaccccatg aatcttgact agaagagaaa ccaccatata tttgatgttg atccaaagca
     7081 tcttttttcg ttgagaagcc tgctacaacc tttccagcta ctggaaccta attggtactg
     7141 aaactgtgtc ttcaaaggcc attccactct tgtacaaaac caactgcttc agaatcatgg
     7201 ggaacatggt aagaccagtg gaatccatga gtgtgggtcc gctgtcacac ttctctgaag
     7261 tgagttcctt ggtcagaagc tgtactatgt ggaataccat aatgcaagat caggcattct
     7321 ataaatgcat ggatggtggt tttggcagaa acattacatg taaaataggc aaatccatat
     7381 ccagaatgag tatctactct agtaaggaca aagtgtgacc atttcaacaa cggaaatagt
     7441 ccaatgtagt caacctgcca ccaggttact ggctggttac accaggaaat tgtgccatat
     7501 tgggtctcag ggttggtctc tgcaactggc aggtcaggca ctcagcagaa gctatatcca
     7561 ggtcagcctt actcaatggc agtccatgtg ttacatccat gcataacctt catctctgac
     7621 accatggaca ctttgttcat tggcccattg ggtaatgata gggatgtcta gggaaagagg
     7681 ctgacagtct acagattggg gtcatcctaa tagacttaat ttactgaact cagctgaagt
     7741 cacctttgga tgagcattta catagaacac aagtatgttc atatcctttg cccattcaga
     7801 gagatctgcc tgcatcttct ccacatgtct ttctcacaac attccagtca tgctcttttc
     7861 catgtctctg gccagccagc cagccagtcc attcactaca gcccatgaat cagtaaactg
     7921 cacatctggc catttcttcc tccaagaaaa atgtcaaacc atgtgttcta catgaagttc
     7981 tgcccacggt gaagactccc tcctcactgg tgtctttcaa ggttatccca gaaagggttt
     8041 gtaacactgc agctttcctc ttctgggtgg tgcctgcatg gcatgcagaa ccatcagtaa
     8101 gccagactct agccttttgt ccctcagaca gttgatcacg gggcagaccc taggcatata
     8161 cacaggagga gaagactttt tttttttttg gttctttttt tcggagctgg ggaccgaacc
     8221 cagggccttg cgcttcctag gtaagcgttc taccactgag ctaaattccc agccccagga
     8281 gaagacattt taacagtaga gcccataggt atcagaacat gatccaataa tagggtcttg
     8341 tgagatttct cagtgcttct gaaaaaattc caagaaaaca agacaagatc gtatgacctc
     8401 agtttcttcc aaaatgtgaa cttgttcttg gattatgctt tcacatagtg gataggagtg
     8461 agtttacttc aaattattca ccacagctgg ctattgtcat tcatatacct ctatgggaaa
     8521 acatgtgttt gctgtgtgcg gcttgtccac cacatgtagc ttacttttgt gactacattt
     8581 tatccatgtg actcctctta accctcagag tataaattgt ctgatgtcct gaataaagct
     8641 tgttattgca tggaa
//
