LOCUS       XM_039101101             438 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ubiquitin-like protein FUBI-like
            (LOC102553078), mRNA.
ACCESSION   XM_039101101
VERSION     XM_039101101.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101101.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..438
                     /gene="LOC102553078"
                     /note="ubiquitin-like protein FUBI-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 long SRA reads, 21 Proteins, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102553078"
                     /db_xref="RGD:7751286"
     CDS             55..438
                     /gene="LOC102553078"
                     /codon_start=1
                     /product="ubiquitin-like protein FUBI"
                     /protein_id="XP_038957029.1"
                     /db_xref="GeneID:102553078"
                     /db_xref="RGD:7751286"
                     /translation="MQLFVRAQELHTLEVTNQETVAQIKAHVASLEGTAPEDQVVLLT
                     GSPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKMAKQEKKKTG
                     RAKRRMQYNRRFVNVVPTFGKRKGP"
ORIGIN      
        1 tcttgactcc atctttgcgg ttgcagcagc ggcgtccgag ggtaagtagc caacatgcag
       61 ctctttgtcc gtgcccagga actacacacc ctcgaggtga ccaaccagga gacggtcgcc
      121 cagatcaaag ctcatgtggc ctcactggaa ggcactgccc ccgaagacca agtcgtgctt
      181 ctgacaggct cgccgctgga ggatgaggcc actctaggcc agtgtggtgt agaggccctg
      241 accactctgg aggtagccgg ccgcatgctg ggaggtaaag ttcatggttc tctggctcgt
      301 gctgggaaag tgagaggtca gactcccaag atggccaaac aggaaaagaa gaagactggt
      361 cgggccaaga ggcgaatgca gtacaaccga cgctttgtca atgttgtgcc cacctttggc
      421 aagaggaagg gcccctaa
//
