LOCUS       XM_039087651            1807 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102552988
            (LOC102552988), transcript variant X2, mRNA.
ACCESSION   XM_039087651
VERSION     XM_039087651.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087651.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1807
                     /gene="LOC102552988"
                     /note="uncharacterized LOC102552988; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 1 sample with support for
                     all annotated introns"
                     /db_xref="GeneID:102552988"
                     /db_xref="RGD:7517962"
     CDS             97..882
                     /gene="LOC102552988"
                     /codon_start=1
                     /product="uncharacterized protein C17orf78 homolog isoform
                     X2"
                     /protein_id="XP_038943579.1"
                     /db_xref="GeneID:102552988"
                     /db_xref="RGD:7517962"
                     /translation="MDTILVFSLMIASYDSNKNVPPEIHTDIKGAPFIRNQTIATLQC
                     LGSRRRVTVHLVYSERRPKVKYILKNRPVATDLPRNRTASPSCHLRPTSQFQNGFLLT
                     AFLPGISQCTVYPAKDRSALSETVPVTAISTSLRRKGEETPSTGAFPIPLTQDIDLSL
                     KRRQKWSIVVKALIAATLLLSGAAIIVFVIFEVPCPCQCLRARRLCQRQWLWRRERKE
                     EDQQPGTTESKLDSQPEKVGQDVPNSSASKKTTGTTVIHQTYF"
ORIGIN      
        1 agtgaaactt ggttccagga cagtaaacgc aacgggaggc aaggctgtaa ggggctgtga
       61 cagagcaaca gtaagcgctc atgaactcag gctggcatgg acaccatctt agtcttcagc
      121 ctaatgattg catcctacga ttccaacaag aacgttcctc cagaaattca cacagatatc
      181 aaaggggccc cattcatccg aaatcagacg atagctaccc tgcagtgcct tggctccagg
      241 aggagagtga cagtccacct tgtatattca gagagaaggc caaaggtcaa gtacattctg
      301 aagaaccggc cagtcgctac tgatcttcct agaaaccgca ctgcttcccc aagctgtcac
      361 ctcaggccca cgtcccagtt tcagaacgga ttccttctaa cagctttttt accagggatc
      421 tcacaatgca cggtgtaccc agcgaaggac agatctgctt tgtcagagac agtgcccgtc
      481 actgccatct ctacatcgct gagaagaaaa ggagaggaaa ctccaagcac tggggctttc
      541 cccatccctt taacacaaga catagacctg tccttaaaga ggaggcagaa atggagtatc
      601 gtagttaaag ctctgattgc tgctactctg ctgctcagtg gggccgctat tatagtgttt
      661 gtcatctttg aagtcccttg cccgtgtcaa tgcctacgag ccagacggct gtgccaacgc
      721 cagtggctat ggagaaggga aaggaaggaa gaagaccagc aacccgggac aactgagtcc
      781 aagttggact ctcagcctga gaaggtcgga caggatgttc ctaactcttc agcctcaaag
      841 aaaacaacag gcaccactgt aatccaccag acatacttct gagctctgct tcgcctgact
      901 ctgaatgtag gtgctgtctt cgacaccacc gtctcctcat tgcaaatcaa taggcgatga
      961 cacttgaagc tctcacactc atcttcacgg ggacattaca atcaaacggc atgcccagac
     1021 agcgaaggaa gagcgtgggt agagcagagc taccttcatg ccgctgcaac tgacacggcc
     1081 ataagcctcc gtgattcgct ctgcacagtt actctccatc ccagcaaatg aagacaaagt
     1141 ccttgcctcc aagcgttccg aatggatctt actgctctcc gggataaaag acaaacacag
     1201 cctccaaagg ccgggaggtg acactgcact gcggcacaca tcccggctcc acttagcctc
     1261 ctagctttcc tcgtactcac tggctgtcat ttaccttcca cagctgcacc tgccgctatc
     1321 agcaacctga atgttccata acccagaaca tgagatttcc cagaagataa gagctgtgct
     1381 gggtctgtgc tcatcagttc tgctcttctg tgggacaata acctgtgtca catctgtact
     1441 ggctttcttc gtggaatctg acaaggtcca aactgtgcat tctgtgtggg gacagttgtc
     1501 ttggcaaaag cgagaatctt ctgagcattt cccctctccc taatcagcta acagctttga
     1561 atccctcccc cagtgcaggg aggatttgga aactaggagc tgagaagagc aaaggaaggg
     1621 ggcactccgt gtggactttg caatgtggac ttcagtctgc agattgcccc agagtcacac
     1681 aaatgctccg gcatcagtct agatacgctc ttacaaaaca ctcaatgcca gtgaatcctc
     1741 tgcagagcac caaattcctg ttgcaaatga tttctcatta aagtttcatg ttttgttttt
     1801 ctgatta
//
