LOCUS       XM_006227984            4131 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC102552823), transcript variant X1, mRNA.
ACCESSION   XM_006227984
VERSION     XM_006227984.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006227984.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006227984.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4131
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4131
                     /gene="LOC102552823"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     5 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 91 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102552823"
                     /db_xref="RGD:7716102"
     CDS             111..1628
                     /gene="LOC102552823"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_006228046.1"
                     /db_xref="GeneID:102552823"
                     /db_xref="RGD:7716102"
                     /translation="MVSTSKPRNCNMNTVTYDDVYVNFTEEEWALLDPLQKNLYKDVM
                     LETLRNLTVIGYNWEDHNIEEHCQYSRRHGRHEGSHIGEKGYEFIQCDKASACHSYPQ
                     RHERIHTEEKSCEDIQHGKDLAGHSDLQKHNRTHTGEKLYKCNECGKAFAYHNSLKIH
                     KRIHTGEKPYICNECGIAFAYLNSLKRHNRTHTGENLYECNQCSKAFTDHHVLQRHKR
                     THTSEKPYKCNQCGKAYSQHCHLQIHKRTHTGEKPYECKHCSKAFSCGDQLRRHERIH
                     TGEKPCKCNQCGKAYAHHSSLLVHKRTHTGEKPYECNQCGKAFARHNTLQYHKRTHTG
                     EKPYECNQCGKVFAYQGNLQMHKKTHTGEKPYECNHFGKAFIGNHSLQWQKRMHTGEK
                     PYEGNQGGKPYSQQGHLQIHKRTHTGDKPHKCNQCGKTFVHYNRLQVHERTHTQEKPY
                     ECSRHGKAGASSDSLQRHIRTHTGDKPYECNQCGKAFSYPGNLQKHKRMHTGAKS"
ORIGIN      
        1 gattagttgc gccttgtagg ggagcaagtt tgaatggttc tgtgtggtgt tctctgaacc
       61 ctgctgctgg atgctctgag gcactctcag gccagccccg aagttgcaac atggtgagca
      121 cgagcaagcc ccgaaattgc aacatgaata cagtgaccta tgatgatgtg tatgtgaact
      181 tcactgaaga agaatgggct ttactggatc ctttacagaa gaatctctac aaagatgtga
      241 tgctggagac cctcaggaat ctaactgtta taggctacaa ttgggaagac cataatattg
      301 aagaacattg tcaatattct agaagacatg gaaggcatga aggaagtcat attggagaga
      361 aaggctatga atttattcag tgtgataaag cctctgcatg tcatagttat cctcaaaggc
      421 atgaaagaat tcatactgaa gagaaatcct gtgaagatat tcaacatggt aaagaccttg
      481 caggacacag tgatctccaa aaacataaca gaacacatac tggagagaaa ctgtacaaat
      541 gtaatgagtg tggtaaagcc tttgcctatc ataattctct taaaatacat aagagaatac
      601 atactggaga gaaaccctac atatgtaatg aatgtggtat agcttttgct tatcttaatt
      661 ctcttaaaag acataacaga acacatactg gagagaatct ttatgaatgt aaccaatgta
      721 gtaaagcatt tacagatcac catgttcttc aaaggcataa aagaacacat actagtgaaa
      781 aaccttataa gtgtaatcaa tgtggtaaag cctattcaca acactgtcat ctccaaatac
      841 ataaaagaac acatactgga gagaagcctt atgaatgtaa gcattgcagt aaagcctttt
      901 cttgtggtga tcaacttcga aggcatgaaa gaattcatac tggagagaaa ccttgcaaat
      961 gtaatcaatg tggtaaagcc tacgcacatc acagtagtct tctagtccat aaaagaacac
     1021 atactggaga gaaaccctat gaatgtaacc agtgtggtaa agcttttgca cgtcacaata
     1081 ctcttcagta ccataagaga acacatactg gagagaagcc ctatgaatgt aaccaatgtg
     1141 gtaaagtctt tgcataccaa ggtaatcttc aaatgcataa aaaaacacac actggagaga
     1201 aaccctatga atgtaatcac tttggcaaag cctttatagg taaccattct cttcaatggc
     1261 agaaaagaat gcacactgga gaaaaacctt atgaaggtaa tcaaggtggt aaaccctatt
     1321 cacaacaagg tcatctccaa atacataaaa gaacacatac tggagacaaa cctcataaat
     1381 gtaatcaatg tggtaaaacc tttgtacatt acaatcgcct tcaagtccat gaaagaaccc
     1441 atactcaaga gaagccctat gaatgtagtc gacatggtaa agctggtgca tcttctgatt
     1501 ctcttcaaag acatataaga acacatactg gagacaaacc ttatgaatgt aatcaatgtg
     1561 gtaaagcctt ttcatatcca ggtaatctcc aaaaacataa aagaatgcat actggagcaa
     1621 aatcttagaa acgtgatgag tgtgatgaat tgtttcacaa caccgtagtc tccaaataca
     1681 taaaacacgt atggagagaa atcttatgaa tgttaagcaa tgtgattagt cctttgcctc
     1741 tcatgttcaa cttcaaatgc atgaaataat tcatactgaa gtgaatcctt ctaaatgtaa
     1801 ttaatgtggt taattacatt aattaattaa tgtaatggtt gcattttgtg attatcttca
     1861 aagacataaa cacatactgg agtaaaacac tatgaatata atcaataaaa gcctttgcag
     1921 gtcacagtag tctccaaata cataaaagaa cacacagtag acagaaaccc tatgaatgta
     1981 accaaagtgg tgaagccttt gcaagtcaca gtgatcttca gagatggtgg tttaaatttg
     2041 cttgtgccat gggaaagtgg cactattagg aagtgtggcc ttgtttgagg aattgtatca
     2101 ctgttggggt tggctttgag gtcttatctt taagctctac ccagagcaga agagagtctt
     2161 ctggttgcct tctgatcaag gtatagaact ctttgttctt ccagcactgg atactgccat
     2221 gcttttcacc ttgataataa tggactgaaa ctctgtatct gcaacgcctc cccaattaaa
     2281 tgttgtgttt tataagagtt gccttggtta tgctatcttt tcactgcagt aaaacctaaa
     2341 ttaagacaaa gtgcatgaaa attgcactgg agtgaagccc tacgaatgta ttgaatatgg
     2401 tgaagccttt gtacatttct ataatcctct ttataaggaa agtattcata ctggagagaa
     2461 accatatgaa tggaagcaat gttgtgaatc ctttgcccct gacagtcatc tccaaatgta
     2521 gaaaagaaca catactagag aaaaaccata tggatgtgct caatgtggta aaagcctttt
     2581 tgtcatgagg tctacttgaa ttcaacacac ctctaacact aggtcaatcc aaatggcaag
     2641 aattagttgt gatcaagcca ttggagttta gagggttggg ttagcatagg gctactgatc
     2701 tatcagggcc tcagaagtgg aactgcaaac caaatgctac agagctttta agcttgacaa
     2761 ccaaaaacat ctctgacaag ttatgattaa attcttccac acatcaggat ttatgagtgg
     2821 gggcttttat tatatggttg agctatgtcc actgatacag gatgtaagtt tatgtttaag
     2881 gttagggttg cacaaggtta agggttatgg ttacctcaca ggattagtat tagctggcag
     2941 gtaagggtta gtgttactaa gggttagggt tacaaggtta ggttgaggtt agaagggtta
     3001 cttgttagag ttttaattgg ttaagtcatt aaggttatgg gtcatggtaa tatttttgat
     3061 ccgattaggt ttaaggtaac atggtttgag ttagggttag agggtgtgaa aatttgaata
     3121 tgcttggccc agtgagtggt aatattaaag ggtgtggcct tgttagagga agtgtgtcac
     3181 tgtgggcatg ggcaatggat attctatggc tataccattt agaaattcag tttttgtttt
     3241 gtttgttttt tgtcactatc tctgcttgcc cacatgagtg ttcaaaagga aactcaagaa
     3301 aatgtacttt ctttttatgt ctaaacttca tttagtaatt tcttcaatgg atgtggtatt
     3361 gttttattaa caggactctg tattttgtta ttaacctgca ctttggtgtg catgttttaa
     3421 tgtaagcact acaagttctc tatccctaaa agtactgcat taccaactgt gtaaactatt
     3481 tgttgtaatc tctccaatag atgtgctaaa aaaatgtcta catgtgtttt caataggaaa
     3541 tttaaggtct tcagggtgag cattagggtt atggttatgg taaggattaa ggttaaggtt
     3601 agtattatgg ttaatgttag ggttagggta agcctaagga ttagttttaa tgttactgtt
     3661 aggattgggg ttagagaaat tgtgttaggg taggaatagg ataagtgaaa gtgttggatt
     3721 ataggttgga ttggggttag tgtggtagta gggtttgggg tagggttagc aatagcccta
     3781 tgtagggtta ggggtaaaaa taggtaagag ttcagggtat gggtaatgta aagttagggt
     3841 taataataag tgtaagagta aattttagaa ttagggatat gattgggttg gggttagaag
     3901 ggataggggt taggtttagt gttaggagtt agggttagag ttcttgtagg ggttggaatc
     3961 aggataggtt aagtttaggt tagcattagg gttagagaaa gtcaactgca agagctctga
     4021 cacagtctct ggatgctagc accttcattt acatgtatgc atactcacca tgaccaccac
     4081 caaacagctg ccacatgtgt gtacataaaa ttaaaataaa aacaaacttg a
//
