LOCUS       XM_039108705            5044 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102552663
            (LOC102552663), mRNA.
ACCESSION   XM_039108705
VERSION     XM_039108705.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108705.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5044
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5044
                     /gene="LOC102552663"
                     /note="uncharacterized LOC102552663; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 1 Protein, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102552663"
                     /db_xref="RGD:7647571"
     CDS             1949..2527
                     /gene="LOC102552663"
                     /codon_start=1
                     /product="zinc finger matrin-type protein 1-like"
                     /protein_id="XP_038964633.1"
                     /db_xref="GeneID:102552663"
                     /db_xref="RGD:7647571"
                     /translation="MDDSFQHELEDFIRKQKARGLHPNVSFRKMAEDSVPQKRDGVSP
                     GDTQLGLPFWFRNYSRSSPSYKRLTVENQVPYCRQRLESLKDCLKIQPVGPDRKERTR
                     HQEEGGATTQEPGVPKGRLYKGRVRGLCSEDSLSRRKASAEPGGTQKSKYRKENHHNG
                     RDSTKGRHRSHRKKKGPEERDLWDEAILGSRY"
ORIGIN      
        1 ggtatgtgtg agagtgtgtg tatgtgttgt gtgtgtgtgt acacttgtac aggtgctaca
       61 ggacacatgt gaaggtcaga ggacaacttg taggtactgg ggaataaact gaggcttgtc
      121 agcaagtgtc tttgcctact gagccatctt gcttacccag caatatcatc ttaacgggac
      181 caccgttgtc cacgtgaatt ctgtcgatca aaatactcta tagcgcgtaa ctatatattg
      241 ttttggaagg agactaaatc tcaagccagc atgacaaatg tgacttcaca ctttacaata
      301 gagaaaccat agtccatgag ggtagaatag caggagttag gttgcatgat ttgcactgcc
      361 attgaagcag gttttctgtt agaacattcc ttagctgaat ggaaagaagt catagaggaa
      421 aatgcagcca agctttcaga atcagctgcc atgagccatt gaatggtgct agttctcatt
      481 ctagtacctt cgttttggac ggggtctcac tgactggtct ggaattttct gtgtagacca
      541 agctggcctt gaattcacga agatcaactc tgaagtcatg agactaatgg cctgcaacac
      601 catgcacagc ttgatttcac cttagtttag ttgcatgata gtccctttta acttacaatt
      661 taattagaag atttaatgac ctagtcttat gcgtggaata gtatttacag cagcggaaag
      721 ttctaaagtt atctgagttt ttaaaacaga tttgtgtgtg tctatgtatt atctgcatgc
      781 agtgcccgca gaggccagca gagggcactg gatcctctgg aactagagtt acagctggct
      841 gtgagctgcc atgagggtgc tgggaactga atggtcctct gtaaaagtag ccagcgcttt
      901 caactgctga actacctctt tagcccaaat tatctggttt ttaaacctgt tacaaccatg
      961 ataaaccttg tgctcattag tctgtgcaac atttgggctc tggtgacagc tcaggcagaa
     1021 agtacttgtg gagcaaactt gaagagcaaa gtttgatcct ggcacccacg tggaaagctg
     1081 ggtgtgtgac acatgtgtga ccccagtgct gaggaggtgg agacagaagg tccctgggga
     1141 atcactgggc agtccctagc cctgtcccac cgagagactc aaaaaccaag gctcccaagg
     1201 aataatacca gagcttagcc tctggcctgc actcatgtgt acaactgccc acaaatgaat
     1261 atgcatacaa gcaaggcatg cacgtataca cattcaacgc acacaaacgc tgaacactat
     1321 tatacattca tatatataca tatgtatgta tgtacgtatg tatgtataga tcctaacatt
     1381 acagtgcgtt acagctgatg catccaccag ctaagacaga tgtaatccta gcaccctgga
     1441 ggcagcaaca gaagaaggat ataaggccag cctgttcaat agaggctaag gctagttggt
     1501 aggaccatgt cgccatgttc aaatgaaagc aggcttgaga ggtggctcaa caggtataag
     1561 aatgcactgc tctaagagga cacaagtttg gttcccagca cttacatcag gtgactcaca
     1621 accacctgtc agccctggaa ggttatgaca acattggcct ccttggggcc ctatgtacaa
     1681 atccatacct atatacatag acataatttt taaaatgtta aattaaaaac aaaacccaat
     1741 gagcaataat tttcctcctc cgttaaagtg tcctctccag actgtgtcaa aagtactcac
     1801 gtccaacatc ggtgactatg ctctattaac tttaaagtaa cgtaaaacac tctctctttg
     1861 gacagagaag atgtcttcag taaaatgatg catcaacaga gtcttctccc attttttctt
     1921 ctagagaaat acattcctga ttggtgcgat ggatgactca tttcagcatg aacttgaaga
     1981 cttcattaga aagcagaaag cgagaggatt acatccaaat gtctccttca gaaagatggc
     2041 agaggattct gttccccaaa agagagatgg tgtcagccct ggagatacac agctggggtt
     2101 accattctgg ttcagaaact actccagatc ctctccttcc tataaaaggc tgactgtgga
     2161 aaaccaggta ccttactgca gacaaagact ggaatctcta aaggattgtc tgaaaatcca
     2221 gccagtcggt ccagacagaa aggagaggac aaggcaccaa gaggaaggag gagccaccac
     2281 tcaggagcca ggggtgccca aggggagact ctacaagggg agagtgagag gtctgtgcag
     2341 cgaggatagc ctcagcagaa ggaaggcctc agcagagcca gggggtacac agaagtctaa
     2401 atacagaaag gagaaccacc ataatgggag agactctacc aaaggcagac accggtccca
     2461 ccgaaagaag aaggggccag aggagaggga tttgtgggat gaagctatct tgggcagtcg
     2521 ctactgattg tgcattttga gtcccatgtg ttgattccct tggtaaggat ggattaaatg
     2581 accttagagc aattagactc caggaggctg ctgtgctcca tgtgctctac tggggtagaa
     2641 attgtgagtc tgcaccgggg agctcttcca gtgctggcag tgacagaccc tttagtatgc
     2701 aaggccttcg ggctgtgctg acagacatag tgacttaaaa gcctgagtgt tgggagttta
     2761 gaagccaatc agtccagata gatctcggag ctgaggctcg agatgttctg ctccgagctt
     2821 taatcatcaa aggtcctagc acttggctct ggagcagaag ctcgcaggag taggtggtag
     2881 ctgccagctg tccatcattc caaccgtcag ttcttgtgag aggccaggac ttcagttctg
     2941 gggactgggg tattcagacg cctggcatct ccctgatact cttcctgtga tcagggccca
     3001 cttgcccttc tacagctttt tgttgtctcc agtgcttctg cttcctgttg tttctgccct
     3061 tggccactcc gggaacttca gccacgttct taccatcact gctgctgtgg aagacacggc
     3121 accaatagct gtgtccacct ttgccattgc taccattctg atgatgctcc cgtccttcac
     3181 tctgtcttca gcccctctac taaaagaaag atcaaaagaa gcttgtcaaa agaattgtga
     3241 tctgcactaa tcagctccat gttttcccca tgctgaggat ttaatccaga gccttggcac
     3301 gaaaggtcag agctctctca ctgagccaca tcttaccccc agtcatgagc cttcttctga
     3361 tggaccacca agggaagtgc cctgccacac ctcgtctggc taaaattggc tgcaggattc
     3421 cctaacactc accaagatct atgactagca agtcaacata ggctgtgtaa aacactctta
     3481 gccataatag ctgggattaa aggcattcgc caccatgcct gccgtccgag aattgtctta
     3541 cgatattaac cagatgctat tgaacaagat aaattaatag atgtgttagt caaaacattt
     3601 agaagcaaag cagaaggctt tgctctaaaa aaaatctata aaaattagag tcttgaacat
     3661 aagcattaaa taaatacaca gaggaactcc agaaagacat gggtatctgg taggagtggg
     3721 ttcaggagac aagaacttgg tgggtaaagg acagcattgt ggggcagact aacctttgag
     3781 ggcccagtga gacagcttgg agtagagatc cttgccacca agcctggctt aaacctgagt
     3841 ttgatccctg agtgggccca cactgtagag gagagagaca actcctgcag tgtgctggtt
     3901 tttatacaga gttttgtttc atacaaggct ttttcccata gctatttgta aaggcaagaa
     3961 acagagcaga gggaaattat ttttatcatt ctcttcaatg tccagcccca ggtatcaaat
     4021 catctctaaa acaggacctt atgcacgagt ctggctttac tgcttccagt agggggtggt
     4081 agaaggtcat tgtggagtag aatcaggaaa gggggaccct gctttccctg gtgtgccctt
     4141 tctagttaca gaaatgggga ggtgctaggg aaagggtcct acccgtagac gatgcacccc
     4201 agcaaatggc tttgttggtg gattctcttt gcagagtgta aatcctgagt ggttgaggaa
     4261 cggaccctca ggctccccct ctcagagttg tgtctcctca gcctcaccca tggagcccag
     4321 ccccagacag gtcggctgcc ccctgcaggt cacagccagc cacaggcttg gtggtcttga
     4381 tctgacagct gtagcatttg aatcttcact gtacaacgtg gagacgtctt catgagttga
     4441 actgtattcc agagcatgta cttgtaggcc tggtggatgg cttcagtgta tggcagtgct
     4501 tgttaccaag cctgccaacc caagttcaat ccctgggtcc ctcatggtgg gaggatagag
     4561 aaccaatccc cccaagttct ctgaccttca catgtggtgt gcacccacct tctacacccc
     4621 ccaacacaca aagcctttta aaacatgcat tcattttatc ttggatttca tcaataaaaa
     4681 tgttgttttg tgttgtaatg tgtgatgtct gtggctgtga ctcttgccca caaagcccta
     4741 aatacttact acctggccct ttacagaagt cctgtcaaat cctgccctag agtcctcttg
     4801 tgcccaccac tttttattaa ttactctttt gtattgaatt ttcctctgcc ttacaatcac
     4861 tgttgtggct ttcatttgac cctgactaat acagtgctat tagacaaacc atttctgcca
     4921 attaagaaat cataaaccaa atagaataag tatttcacct gtttatttag acatgagtgc
     4981 tggggaggtg acttagtggc aaaatgcttg ctgggcaaga gtgaggagct gagttcgaat
     5041 tcca
//
