LOCUS       XM_039098116             865 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102552540
            (LOC102552540), transcript variant X3, mRNA.
ACCESSION   XM_039098116
VERSION     XM_039098116.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..865
                     /gene="LOC102552540"
                     /note="uncharacterized LOC102552540; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102552540"
                     /db_xref="RGD:7544409"
     CDS             438..824
                     /gene="LOC102552540"
                     /codon_start=1
                     /product="uncharacterized protein LOC102552540"
                     /protein_id="XP_038954044.1"
                     /db_xref="GeneID:102552540"
                     /db_xref="RGD:7544409"
                     /translation="MNNRPYFRPNPYYEDLERMEEVVMSILHNLVMENTEIHENNHEL
                     KKEMTFSRNLLSQLLMENTCRKKLVPLKQGSKEGHLECALNQTYLVDLSKKDKDQQRP
                     DPASSGLRKCKRARIGHTPVRELPEE"
ORIGIN      
        1 tctgctcccc atgacatctg ctgtcccttc ttggacattc tattgtctcc tagagagttc
       61 ttggcatcct ctgtgatgtc accagtgttg tagtgacaac cagtgcccta gtttctctca
      121 gtctgagtct ggcgattaca agctaagaca tgttttcccg tcttctcaag cgttttggga
      181 gggggaacat cgattgtgga gaaactagag tgaaggagtc tagcgttttg tcccaaagta
      241 atgatggacc acagggcttc tggggaatgt ggagtacgtt ctgggcagta cactgggaga
      301 gaaacatcat cctcttggac agacctaagt aagaagcagg ccaagaagga aaggagaggc
      361 tgattaaaga gctgcagctc attaccgagg agagaaatga cctgagagat cgcctgaggt
      421 ttctgacaga gagatccatg aacaacaggc cctatttcag gccaaatcca tattatgaag
      481 atctggagag aatggaggag gtggtcatgt caattctgca caacttagtg atggagaaca
      541 ctgagatcca tgagaacaac catgagctga agaaggagat gaccttctct agaaacctgc
      601 tcagccagct cctgatggag aacacatgta ggaagaagtt ggtcccactg aagcagggga
      661 gcaaggaggg acatcttgag tgtgcactga accagacata tttggttgac ttaagcaaga
      721 aagataaaga ccagcaacgt ccagacccag catcatcagg tctcagaaag tgcaagagag
      781 ctagaattgg acacacacca gtaagagagc ttcctgaaga ataagttgct ttctcaggag
      841 tccctgatga caaacatcct gaacg
//
