LOCUS       XM_039100915            1698 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102552485
            (LOC102552485), transcript variant X1, mRNA.
ACCESSION   XM_039100915
VERSION     XM_039100915.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100915.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1698
                     /gene="LOC102552485"
                     /note="uncharacterized LOC102552485; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, and 93% coverage of the annotated genomic feature by
                     RNAseq alignments, including 3 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:102552485"
                     /db_xref="RGD:7731725"
     CDS             163..1557
                     /gene="LOC102552485"
                     /codon_start=1
                     /product="uncharacterized protein LOC102552485 isoform X1"
                     /protein_id="XP_038956843.1"
                     /db_xref="GeneID:102552485"
                     /db_xref="RGD:7731725"
                     /translation="MDQNPSGRQGKETAAPFGRQDESQVSLKVTSSFQDATQGQQTDM
                     LAPMPIIYTRKFSGMEPYTPTPSRRVSIQEPPASIFLPRRISTQSPSPSTILPRRLST
                     QENPPQGFQSITKDIQSVAYNRWLSSRETSSLYPNRRLGILSSHTLSCGQEETSNLQI
                     DTESHSSMTQAYGLNRKQIRPSVDVPPSITQSPEASIRSLEAFLWDSKDNLKEITEDS
                     ESSHSSSRLSSISTTINSSRVQSKCWTLLPIGWRLLLEAKKISRHLSLVLTVAGMVIL
                     SLIALWKPWIHFQVPLTPPGDPAGPKAIPIDTIFFMRCPDISCMNEYDKNAYLLDMAW
                     ACLLISGVMSFCVCMGLVSTIFFPSTSLPLMDFSLFICSLMTGINIILGVLFYLMQAR
                     KFLQEGMTYTLGSSFYLAWINVFFFLMTGLAGLWCGLSGADGVVGIVGRQGLFSYLNY
                     INFWSILSLQAIWS"
ORIGIN      
        1 gctgtctggg gacagagaaa cagagagctg gagccacaga cagagggaca cacagcctta
       61 gagtcagact gacaggtatc caggaggccg tgggcatgcc tggaagcaga ggcagatgcg
      121 aattgagtac attcagagac tagccccatc ctgctcttca acatggacca gaacccctct
      181 ggccgccagg gcaaagaaac agcagctccc ttcggcaggc aagatgaatc ccaagtctct
      241 ctgaaagtga cctcgagctt ccaagatgcc acccaaggtc agcaaactga catgctggca
      301 cctatgccca tcatctacac tcgcaaattc agtggcatgg aaccatacac acccacacct
      361 agccgaaggg ttagcatcca ggaaccacca gcatctatct ttctccctcg caggatcagt
      421 acacagagtc catccccatc caccattctc cctcgaaggt taagtactca agagaaccct
      481 cctcagggtt tccagtccat caccaaagac atacaatctg tggcctacaa tcgctggctc
      541 agttccagag agacttcttc cctttacccg aatcgccgac tgggcatcct aagctctcat
      601 accctgtcct gtggccagga agaaacctca aacttacaaa tcgacactga aagtcactcc
      661 tccatgaccc aggcatatgg cctcaacaga aaacaaattc ggcccagtgt ggatgttccc
      721 ccatccataa cccagagccc agaggccagc atcagaagtt tggaagcctt tctctgggac
      781 tccaaggaca acttgaaaga aatcacagag gactctgagt ccagtcacag ctcctcaaga
      841 ctgtccagca tttctactac aataaactct agcagggttc agagcaaatg ctggacactg
      901 cttcccatag gctggaggct gctgctcgag gccaagaaga tcagcagaca cctcagcctg
      961 gtgctgactg tggccggcat ggtgattctc agcctcatcg ccctgtggaa accctggatc
     1021 cacttccaag tgcctctaac gcccccaggg gaccctgctg gccccaaagc catccccatc
     1081 gacaccatct tcttcatgcg ctgccctgac atctcctgca tgaatgaata tgacaagaat
     1141 gcttatttgc tggatatggc ctgggcctgc ctcctcatct ccggtgtcat gagtttctgc
     1201 gtgtgcatgg gtctcgtcag cactatattc ttccctagca ccagcctgcc cttgatggac
     1261 ttctctctct tcatttgcag cctcatgaca gggatcaaca tcattttggg ggtcctgttc
     1321 tacctgatgc aagcccgaaa gttcctacag gaaggcatga cctacacact ggggagcagt
     1381 ttctaccttg cctggatcaa tgtcttcttc ttcttaatga ctggtctggc tgggctctgg
     1441 tgtggcctca gtggtgcaga cggtgttgtg gggattgttg ggaggcaggg tctcttctcc
     1501 tatctgaact acatcaactt ctggtctatc ctgtcactcc aggccatatg gtcttaagac
     1561 ctgactatga actaacactg atggtctgct taggctgtca actgccaaac aatccatccc
     1621 tatactcaag ttatgtaact tccgactccc ttcaacccag aagactaatt tatattttac
     1681 agaaaaatat cttcttga
//
