LOCUS       XM_039100982            9783 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102552387
            (LOC102552387), transcript variant X2, mRNA.
ACCESSION   XM_039100982
VERSION     XM_039100982.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100982.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9783
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..9783
                     /gene="LOC102552387"
                     /note="uncharacterized LOC102552387; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102552387"
                     /db_xref="RGD:7730966"
     CDS             1555..2280
                     /gene="LOC102552387"
                     /codon_start=1
                     /product="uncharacterized protein LOC102552387 isoform X1"
                     /protein_id="XP_038956910.1"
                     /db_xref="GeneID:102552387"
                     /db_xref="RGD:7730966"
                     /translation="MSQMEVDAWGSHRAGRGEAFNKKRHACHFPQSASNLCIIRWLQS
                     VCKELHSSAPSKSPLRIERKMSSSGGTETAPWSPVLWKAPEWFFVRVDGIAPTYQPDK
                     YAAEENTIWKDVLGKIEKKLCFWDRCGLECEHCKEDTYRFTSCTDQSRDIQGAMVYDL
                     YILLSYILAIYYSHRRLTWSWKFEELLQENKWIHGSRNLRTWQRFNILRGAQCSRLQT
                     PGQHLYLILLVSFSLTPVWLTQM"
ORIGIN      
        1 tggcagaatg tagatttgaa taaatggctt aattttgtaa tgatatagtc gaagatgagt
       61 ctagctatat ggcaagatat ttgtaaatat gttttgagtt tgaatctcac tcctggaaac
      121 atggggctgg gaggaaaacc acaattaact tctacagggg taactgcctc tgcttagatg
      181 agaaacagca gacaactgag tagaagagag ggatgtatac ctgttcttgg ggtggggaca
      241 aagcttttca gggtggagat ttgggagatt tgacttgggc tgctctgtag gatggagtgg
      301 aaatggggag ggctgaggat ggccagtggg cagttagagg gttctgtgtg tggaatctgg
      361 cagttggaaa tgctcagggg aggggcttag ccactcctgt gcctcatgga atttacaagc
      421 atatctgaca ctccttgggt ggccaaaaac caggaactag aaaccccaaa tacttgctaa
      481 tagcaatcct acagatataa aaataaatta atagaaacaa gtagctatta ttgcttctta
      541 tgatattctg ttatactcat agttcagtgc cttattcaac catcagaaaa ggcttctcct
      601 gcagctgagg gtaacaaatg cagagacaca cagccaatca ttatgcaggc agagagacag
      661 acagacagac agacagatac acacacacac acacagagca atatggaaaa acacatacag
      721 agagaaaaga gacagagaca gagacagaaa gacagagaca gagagacagc acaactctaa
      781 atgggatata cattaaatag tccttttcag agctcagaag tagaaaatga agcagagata
      841 gtattaccag tggagagatt aggcataagg agaacaaagc cctctaagtt cactgattag
      901 agtttatatg tacacatgga cattgaaaca gcaaccatat ggcctacagg ggtctgtaaa
      961 gaggtcctcc acaaacatag gttttaattt aatgttttta gaggtctcca gaatgtgtaa
     1021 aaaatgtgtc tgacattctt gtgtcttaag atctttttct tctgttggtt tgccaagtcc
     1081 taatttattg taatgacttt ctgtttggca gcctaagttt cattatcaaa ttcaatataa
     1141 agattaatga agagaaccct cttcactaaa ttgtcctctg acttgcaaac tttgtgcatt
     1201 tattgcccca taacaaacag acaaaccaac atctcaacat cgtgtatatt ctatgagggc
     1261 tggagacttc agtgactaaa agcatacatt gctcttgcag aagaggtgac ttcagtttct
     1321 aggtgaacaa cagctgcctc acaattgtga aagtggaagg ttcccgaaaa gcaacatctg
     1381 agtttgtctt ctgagctcca catctacatt ctgtgcacac atctacccat tgtttgggtg
     1441 acatttctta ctttgtatga agatattcct ggatcaagaa gcgaagggcc tgaattacca
     1501 actacacaac caatgtggtg gccagtggta cagctggcta ctgtcaagta acccatgtcg
     1561 cagatggagg tggatgcatg gggctcccac agggcaggca ggggagaagc atttaacaag
     1621 aagcgacatg catgccactt ccctcaatca gcctcgaatc tctgtatcat caggtggctc
     1681 cagtcagtct gtaaagaact tcattcctct gctccctcta aatctccctt gaggattgaa
     1741 aggaaaatgt catcatcagg aggaacagaa acagctccat ggtcacctgt gttatggaaa
     1801 gcacctgagt ggttctttgt acgtgttgat ggaatagcac caacatatca accagacaag
     1861 tatgctgcag aggagaacac aatatggaag gatgtattgg gaaaaattga aaaaaaattg
     1921 tgtttctggg acaggtgtgg actggaatgt gagcattgca aagaggacac ttacagattc
     1981 acatcctgca ctgatcaatc tagagacatc caaggggcca tggtttatga tctgtatata
     2041 ttgttgtcgt acatcttggc aatctactat tctcatcgca gactcacgtg gagttggaag
     2101 tttgaagaat tacttcaaga aaataagtgg attcatggaa gcagaaacct gaggacatgg
     2161 cagagattca atattctccg tggggctcag tgctccagac ttcagacccc tggccagcac
     2221 ctctacctta tcttactggt gagcttcagt ctcactcctg tgtggctaac tcagatgtag
     2281 tggaaccact tctatacaag gcttgtccaa gtcagaaatc tgtggtgact caaacttgat
     2341 accagtttct gcagcctcct tagctgatgc tgatgttggg ggtgcttcat cacaggcttc
     2401 ctttcctgaa gacactacag gtaggctgaa atttcttgtt aatgaagatg gctgagcttc
     2461 ctgcgatggt aatggtggtg cagggcccac ttccccacat ttgtttcttt caacatagat
     2521 ttgtataaaa ataaaataag accatttaga aaaccatgcc ctaagcagga tttccattat
     2581 gtcctaccag aaggctgcct tctgggctag ttccttttgt ttatttttct gcaggaaggc
     2641 aaaaggattt gagtcaatac tgcaactctt ggaagagaag tcttgttagt atagacatga
     2701 accaagtgta gttctgttca agtctgacat ttcagtctag ggactgtatt ccttgtgtgg
     2761 cagaaaaccc ctacttcctc cttactcata tctgtatatc tgtcttcagt aaagctgggt
     2821 ctcagttttc ctagtaccac attccattgt gtgtgtgtgc atgtgtgtgt gtccacacac
     2881 gtgtgcacac cgtggtactc aagtgcatgt agagctcttt catagaatca tgcacttcac
     2941 taaagcagca caagacagtc ctaggaacag acaaagtagt ttacactcaa tcttgtcgcc
     3001 ttgctcctcc tcacggacct tttgccactt aacttttata ttcttccctt gattccttag
     3061 aatgttcttc ttcagctcct ctgccctctc aaaaactttt tatatagtct gcaatacaat
     3121 accaaaatgg agaatcagca cagttctaat gccagaaaag agacaaagaa tacaagttgg
     3181 gagaggcagt attatgtcgc gcatgacttg aacttcattc cctcccagtc cctcctctgt
     3241 actgaactcc tgaggcagca tttcctcccc ttccacacac tgtcagcatc tgtggctttt
     3301 ctatatgcag ccatgaactg ctctggagat gtttgatcag gcacatagag aataaagagc
     3361 caccttgatg acctttgctc ttctaccact gacagcatac tttcgatagt tctgttcctt
     3421 ggataggttt tccacataga gtctaaagga atagagcaga gtaacaaggc tatgcagaga
     3481 aattcaaatg tctaaatgag gccttgagga aatttggcct ctgtatgcac ggttttagat
     3541 gctcctggag tttgaaaagg cacaccctgt aatcccacat ccaataccat ttctgtacct
     3601 ggagagagac gtatacctag tcttccacta aactggcaca ttcagcgaac atagcatagc
     3661 tagactgaca tagtacatgt ttgacatcta agtactaaga agagaccatg tagacccaca
     3721 gagccttgag gaaacaggtt ctactcccta acttcaaact aaaaatcaaa gactgtggtc
     3781 tctgtcttcc attcgcaatc atgatttgaa ttttggcaca cacagcacct ctggatattg
     3841 cttagctgat gtgcaccacc tcacctcaca gatcattatg taatgagagg agacactgag
     3901 gtacttagtg ctggagtcac tgggggtact tagtgctgtg ggcatctagt cagatgctgc
     3961 acctaaggat gttgttaaac tgcttcaacc ctcatatctg tccaagattc aaaaaagatt
     4021 ctcatccctg tcaaaaactc tacttacgaa gagcctatga ccagaaactc agtatggaaa
     4081 gctgatgttt tggaggacat atgagtccct aggaagagag atttgttttt ggaacaggga
     4141 agaaatgaag ggagattact atgatcttaa gagaatgcct gcaatttact gaaaaccacc
     4201 agagcacaac aaagagaacc ccagttctag gagttgaaca acctcagagt catgtacatc
     4261 tccatatgtt ctatttgacc aaactcaggg ccattcatgc ttggtgtgac attttctttt
     4321 attcttttat tcaaaagcta aggatccttg tcagtgaggc tatatgggtt atttcctgat
     4381 gacagctctc caatttatta tttcttcttc ttacccaata taatgaacaa tttcagggac
     4441 ccaagccatg cttaatcaca ctgacaccag gtggtccacc atcctctggt gaatgtgtag
     4501 ctacaggaag gcctacctct cccccatata actcagtaaa tttggtcacc catcagagac
     4561 aatcctgtat ctgtctgaga atagatttgg aagtctagat actcaccagt tcagatacac
     4621 cctgctttcc tggcaccttt tcttcccttg tgagctgtag tatgtgtgta caaggctaaa
     4681 gaagtaattg tgctattaat gaaattcctt atttatatta ccacctttgg tcttcatgtg
     4741 tttggatttc gaggaaaagc atgtgtgtgc attgccagaa atctgattaa aagttgactc
     4801 ccttgagttc catagctatc agcaaagtag agaatctata tagaaaagca ggatgagcaa
     4861 ggaaagtgtc ccaggaaagg agacagaaac tgtaggtttc tcacgtgaga aatttatgat
     4921 agagcacaaa ggctgattta acttgtccac atttatcctg gttggctgcc attttgaaga
     4981 ggtttttcct cagcctcatg taagtagcca aggaaaaatt gttgatttca gtgttctgcc
     5041 caagagcact taagatttgg aaatggtctt ggggaaggag agtgacatca tggtgcctac
     5101 atatattcta agacatataa gacaggaaga cgtcaaaacc catcttctac catgctgcca
     5161 ttccagctct ctagcacaca cacacacaca cacacacaca cacacacaca cacacacaca
     5221 cacacacaca cacatacatt agtctaaaga cagaaaaaag acactgaggt tttaaatgtc
     5281 cttcatataa tttcatgcat atcatcttta tttgtaactg tattgagact taccacattt
     5341 gttgctccag cagagaaagg tcctttatta catagactct gttgttctga gtgcctaggt
     5401 atcacaaggt tccctcctgt cacaagataa gataaacaag caattaggaa aggagatcct
     5461 ttgcctctct aagaatgatt gttagtttat gttaatgtac gtgttgctaa agtaatgccc
     5521 attttgccta attgaatctc cattaaaaat tcctatagaa aaaaagcaat ggcttaagcc
     5581 tattttttaa tcaaatttta aatttgtcac tgggcaatgc aggttgtggc taccatcctg
     5641 cttcactcac tgaactgcag gcataaaagc ctggacctcc atggcccccc aagtgctcag
     5701 gtagcatgtc tgaacaagca ttcctggcag tcatactact tttagaaatt ttttctgggg
     5761 gaccatagca gggaatactg tccctaggtc ctagacatga cacccagtcc cattgctctg
     5821 ttctgaaggt tccattctaa caataaaccc caggtccatg agggttatac tctcattcct
     5881 gagtaggaca cagctgcctg cccaggcagg tcagcaagga caaccctgtt catggaagtt
     5941 tggcagattt ggcagcagct tttccttact tcccaacact gcctttgaac agtgttaaaa
     6001 ttcagatgct aatgtggaag ctggctgtaa gctgggtgcc tcagtaagga atcttggatc
     6061 taagggctcc tgtgttcacc tcaagtctct tgtctggtac tctggacgac ctctcatgga
     6121 tgacctgggt gttttctcta cactgtgctc tcctaaacac tcagccacca aatgagacca
     6181 gacagcagct tgttagttac tatggaatgt gaagatccag ttatgaaaga ggaaatgctc
     6241 tgtccagaat cataagctca gatatctcag ggccaaaact gatgctaggc caccagattc
     6301 tagttcagta cttttcctca tgcttacacc ctgtctgact ttctcaaaat atatgggaaa
     6361 attcaaggaa agaatgttta aatgtcagac tttgtgaggt gtgtaatatg aaaacagttt
     6421 taagaatcag atagttaagg acactgtcag attttatgaa caaaaaccca catgtgttgg
     6481 actagttttg tcctcatcat aaggacccca cgatgattca ggtgtgcact ggctaggagg
     6541 tagactaata tcataaagct gtactggttg ccctagctca agaattcctg ggtagggggg
     6601 actcagataa attagagatg tacaactgag tcttactgaa ttcctgtctt tgctttgtag
     6661 tctcataatt ccttatggtt atgattattg aactgtgtct tgtgaagtaa atgactatga
     6721 agcttggaaa tcagctttag cttgatgtcc aatcccacag agactagttc accatgattt
     6781 ccctagttca tgtcctttct gaaagtcaga gggaaagtaa gccccagcac aatctcagcc
     6841 ctttgggaca tgtcaccaac atgtgctcag aaagaactgt atttttttca gtaattttga
     6901 cttcacagcc agaactggcc tgtaattcat aatttatctt aaggttcaat gaaccagcgc
     6961 cagtccttct gtctcagcca cttggatact ggagttttac cattgagtcc agagactgca
     7021 ctaagaattg gtactactgt gtattcatcc aatgatcatt ttcaaaattg tcaagcatca
     7081 ccagtgttca gggactaaga acaccaaatt taaacaccaa gggtgttttc ctgataagct
     7141 ggtcctgcta gtcatgccct gtcccagcct cagatccttc ctggtctatt ggtctattga
     7201 cttatatgtc cattaagtcc ttctctattt gccaaatact aagcaatttc tatccctcgt
     7261 gtctttttat atttattttt taatatcatt tggctgactt tgggattcta tactgagctt
     7321 cctgtgtttc atgcttaaca cctccatgtt ctatgttctc ctttcatcta ttcttctata
     7381 atctctcctc cccaacccct gcaccatatt tttaaatttt cttcaggatc tccaggcaca
     7441 gttggtctgg tcttttgata aatggcccct agcttgcctt ctcaagaaca ttaggttttt
     7501 ttactgtcct gtgaatccac ccttctatct tagtggtctt tagacagaag attcctgata
     7561 ccccgaaatt taattttaaa ttttattggt ttcattttat ttctcagtaa tcgtcttata
     7621 cgcccagact ggctctaaag ttactttcca acagaaactc ttctgttctc cttggatttc
     7681 acggctctgg tttccaaggg ctggcattac agatgaatgt caccatatcc tagctaatca
     7741 catttggggt ttgtttgtaa tgtcagtcaa ggatgtgagg ttatctgtaa gccatttact
     7801 aaaacttggt gtggcatcct gctccatcaa taaggtaccc atctttaacc cagtgtgtag
     7861 caccagggag agcacaattg ttcctgtgcc cttgactata acaaactatc ctctgtcagg
     7921 gaaagaagac cttcttctat cagatacttt cagagaacac aaatgtgcaa caatggagga
     7981 gaaaggtaca tctacccagt tggcaaagtc tagtcaattt tagctgctga ttgagcagtg
     8041 gcagatgtct tattgaaact cctcacctca acattactct tgaataaccc caactgtgaa
     8101 gtactattgc ggaaaagtct gtggaggctg tcaacagaag agaagcatct tggccttcgg
     8161 ttctcatgtg tctatatcca gttatctctc tgcatcagtt gaattagtcc cataaaccat
     8221 ttggggggct gaaaacccat ctttaaattt tgtttcctaa agccttaggc atgcctcttt
     8281 agtactatga cactctattt tagatgtctc taacaccata ggaaaagatg ctacaatcat
     8341 atggcctgct atatgaacaa ctttgctatc taaattgtag ggaaatcacc ttatctctta
     8401 atttttctac ccattttgag acaggctaga ttagtcactt agtcatatac tccatatttg
     8461 ctatatttga caagctatta ttggaaaata tatacagttt gaactagtta aatcaatttt
     8521 ctactttgca tagcttactt tgttggaaat tagaattcct aatcatatat gaaattgaag
     8581 atgaagagaa gaaaccctgc gtggtgagac ctgattttta atttgtctct cagaaggtga
     8641 agcaggtaga tcaacccaag tttgagactg tcttggcagg atagtgggac tgtgtctcaa
     8701 agctaatgac agcaaagcca agtgaaataa ttaaagggaa gaggccatga ttaaatgttg
     8761 aagttacatg tctgtggaaa ggtcttggtg tctgagatgc tggcctcaga agctgcattc
     8821 ccttgcagat ggacaccatg tcattatgga agggaaacac aataagaaac tgatactaaa
     8881 tgccttcctc aactgctccc tatcagcatc cagtggcttc ttcatcttca gatatttttg
     8941 catcttcagg attagcccat gtacagccat ggttgcttgt ttctctctca tatattcttc
     9001 attttttatt ttattctcag tcttcttttt tcatttgtca ccatatgctc aaacaatgac
     9061 ttttgaaagg gcacatcata acactttaaa cattacatgt caatgatctg agatttagtc
     9121 ttgaatttca gtaggaagta catttctcaa cagtcattca caaaacagat tagacagtac
     9181 tttggaccaa ctgccttttt aatcaaagac acgtgagtac ttcattgctt gttgacattt
     9241 ccgtgacctg agtatgtgtt attcctgaca ccattacccc attgccatca tgttcataat
     9301 cagcctgaag ctacatgctt tccagaagca gtctgttctg tacagctact cagaaaatta
     9361 atctgtctat gacaagtctg ccttgctaag ggtaatgtca gcataggtat ttttcccaag
     9421 aagagtgtaa gaacagaggc tttcagaggc tgattcttta aagcaagtaa atatacatac
     9481 aatttaagag tcaaatgcag taaatttcat tttccccata ttcaaaggaa cagtaaagtc
     9541 attaattgaa tgtctgttat attgcctaac aatgttcatt attttcctca ttgctatgga
     9601 aaagtgcatg ataaactcaa cttaagcatg gaaggtttgt ttcctcataa tctgagggta
     9661 tagtctagca tggacaagag aagtcagcat ggcaggcagg agtgtgaatc agctggtcac
     9721 atggtaccca cagtaaggaa gcagagagag aaagagaaat tgttgtgctc agatatcttt
     9781 caa
//
