LOCUS       XM_008769357            1887 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus trichohyalin-like (LOC102552378),
            mRNA.
ACCESSION   XM_008769357
VERSION     XM_008769357.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008769357.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008769357.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1887
                     /gene="LOC102552378"
                     /note="trichohyalin-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     2 Proteins, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102552378"
                     /db_xref="RGD:7572423"
     CDS             135..1511
                     /gene="LOC102552378"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 121-like"
                     /protein_id="XP_008767579.1"
                     /db_xref="GeneID:102552378"
                     /db_xref="RGD:7572423"
                     /translation="MEPRGQNYPNWDTRGRRATIFPQREGVKVAVPSTFLAQYEDTAF
                     LTTRYKTFLTRKRALCDFRVRWPELVSTEQEPQKEDTSFLGLPSLDRKPTDTSSCSSA
                     SISLKNQESSHGDLEDPKEFTGCLAEGFPESPHVTILNSYLKPESMTRLEKKVRKRTV
                     VVMNQLEHEKESAKFRRAVLLRDTRELQDEKAYEEAGNKPFLEYLKEKNQETQEKYDS
                     LWKDYIQQCQEIKDRRQELVSTFTSQREDLQKELMRNKKLDASLKKKLQALEPIAHIK
                     ESQDREIKALELEHASIVANIPFMDREAHFQFLRERAALEKQVEGMNLLESGEDITRE
                     LKKKTKAWDTAAKQAHEDFCQDVNARNRQLRTQLQQLDQEFCKLEIRKEKLEWQKQQW
                     KEQQWYLEALTRGRERLQRREHHRQEREHRRQEREHRRQKWEHHRQQQEHPALSRLLG
                     ARPKANPK"
ORIGIN      
        1 caatgtaggg aaagtggtgg cttagggacc cagacgatgg ccggctgggg ctaccttagc
       61 ctgcagaagg tgctgagcac ctggtagtgg aatctgtgaa gggcagcgcc ctgccctcag
      121 gaggcgaagg gactatggaa ccccgaggtc aaaattaccc aaactgggac acgaggggca
      181 ggcgtgctac catcttcccc cagagagaag gggtcaaggt tgcggtaccc tctacgttcc
      241 ttgctcaata tgaagacact gctttcctga caaccagata caagactttc ctgaccagga
      301 aaagggcctt gtgtgacttc agggtgagat ggccggagct agtctccaca gaacaggagc
      361 cacagaaaga ggacacatcc ttccttggac tcccttccct tgacagaaag cccacggaca
      421 caagctcctg ctcctccgct agcatcagcc tcaaaaatca ggagagcagc catggcgacc
      481 tcgaggatcc caaggaattc actggctgcc tcgcagaagg ctttccagag tctcctcatg
      541 tgaccattct caacagctac ctgaagccgg agtcaatgac acgactggag aagaaagtga
      601 ggaagaggac cgtggtggtc atgaatcagt tggagcatga gaaggaatcg gctaagttcc
      661 ggagggcagt gctactgagg gatactaggg agctccagga tgaaaaggct tacgaggaag
      721 cagggaacaa gcccttcctg gagtacctga aggagaaaaa ccaggaaacc caggagaagt
      781 acgactccct gtggaaagac tacatccagc agtgtcaaga gatcaaggac aggaggcaag
      841 agctggtctc caccttcacc tcacagaggg aagacctcca gaaggagctg atgcggaaca
      901 agaagctcga cgccagcttg aagaagaagc tgcaggccct ggagcccatc gcacacataa
      961 aggagagcca ggatcgggag ataaaagcct tagagttaga gcacgctagc atagtagcca
     1021 acatcccctt catggaccga gaggcacact ttcagttcct gagggagagg gccgccttgg
     1081 agaagcaagt ggagggtatg aacctgctgg agtctggaga ggacatcacc agggagctga
     1141 agaagaagac caaggcctgg gacactgcag ccaaacaggc tcacgaggac ttctgccaag
     1201 atgtcaatgc acgaaacagg cagctgcgga cacagctcca gcagctggat caggaattct
     1261 gcaaactgga gatcagaaag gagaagctgg aatggcaaaa gcagcagtgg aaagagcagc
     1321 agtggtacct ggaggctctg actcggggga gagagcgcct gcagcggcgg gagcaccacc
     1381 ggcaagagcg ggagcaccgc cggcaggagc gggagcaccg gaggcagaag tgggagcacc
     1441 accgacagca gcaggagcac ccagcactga gccgtctact gggtgccagg ccgaaagcca
     1501 atcctaagta atgggctgcc atgccccagg aagctgactg gagctgaagc tggggccacc
     1561 acacaaagaa tgacaatggt gtctgatgat gcagaggaca aaagcaccag ggtacggaga
     1621 gctgagcttc tcagaggggc cgagggggcc tggcctggcc tctctcaggc ttggctccca
     1681 catagcagcc caaagggcca ccctaaccga aagcttccca gcactgggag gctttgttct
     1741 tcagaagcca taccttctgt gttccctgtt gcaatccaga cttcggtgct caattcctgc
     1801 tctagtgtgg ccttcaggac gacagggtgc attttgtaat ggacactttc cacactgtca
     1861 gcccatctca cagtaggagc atggtgt
//
