LOCUS       XM_039113233            1437 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102552179
            (LOC102552179), transcript variant X1, mRNA.
ACCESSION   XM_039113233
VERSION     XM_039113233.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1437
                     /gene="LOC102552179"
                     /note="uncharacterized LOC102552179; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 211 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102552179"
                     /db_xref="RGD:7648446"
     CDS             31..723
                     /gene="LOC102552179"
                     /codon_start=1
                     /product="laforin-like"
                     /protein_id="XP_038969161.1"
                     /db_xref="GeneID:102552179"
                     /db_xref="RGD:7648446"
                     /translation="MSGRRSAPSPGGQGRRPAAAAGAGGPGGGGAGRGGGRTGCGRGA
                     SRTAAAAVSSRARLNFLYSPERRGHPDPRGPEAGPRQRRTAELGAGSPGSPLLPSKLS
                     GAASPTAIFPERRRRRSCPQLPPRLRDPIAARLPGHSPPCIPFACGAPNCTGTPSPQQ
                     LLPPLCPFSGPRCPPTYCGCRALSALQSAAPLIAVGPRPGSTAPGRSGSSCAGFPHSP
                     RFTATIHQITSC"
ORIGIN      
        1 gccattgctc tcctgcctcc gctctgcacc atgtcaggaa ggagaagcgc tccttcaccc
       61 ggggggcagg ggcggcggcc tgcggcggcg gccggcgcgg ggggacccgg cgggggaggc
      121 gcggggcggg gaggcggcag gacagggtgt gggaggggag cgagccgcac cgccgcagcg
      181 gccgtctcct cccgcgcccg cctcaacttt ttgtacagcc cggagaggcg cgggcacccc
      241 gatccccgcg gtccagaagc gggtcctcgc caaagacgca cagcagagtt gggggccggt
      301 tctcccggca gcccgctcct cccgagcaaa cttagcggcg cggccagccc cacagccatt
      361 ttcccggaga ggcggcggag gcggtcgtgc ccgcagttgc cgccacggct tcgggacccg
      421 atcgctgccc gactccccgg gcacagcccg ccctgcatcc ccttcgcctg cggagctccc
      481 aactgcaccg ggaccccatc gccgcagcag ctgctcccgc cgctttgccc attcagcggc
      541 ccccgctgcc cacctaccta ctgcgggtgc agagcgctgt cagctctcca gtctgccgcc
      601 ccactgatcg ccgtgggtcc ccgtccgggc agcaccgctc ccggccgcag cggcagttcc
      661 tgcgccgggt tcccccactc gccccgattt actgccacaa tccaccaaat aacaagctgt
      721 tgagcagact cgcttccaca cgaactccta ttggctgttc atgacgccga atagcttcgg
      781 attggagctc gctgtctgcc tttctcattg gatgtagctg tgaaacttcc atgattggtg
      841 cggaaaacag caggtaggac atcttccact tctgattggc tggatctgaa gacgcacgtt
      901 attggaggat ggaggactga gtaagggagc ccaaaatttt gattggagga gcagactccg
      961 gatgtgcttg actgaacact gattggagaa cagaggggtc aggaagagca gttccgcacg
     1021 aggattgggc ggtggtgtgt cccatggaaa cggaatccag aactgcagcc agggttttgc
     1081 acgggggcgg agccgggtct tccccaggcg cctgcgccta agcggtttcc cggcgccatt
     1141 ttgtcccggc agcagcagcc cgcagctcta tcccattttc tgtgtctaga gggaaggaag
     1201 cggactctat ctggtaggtt tagttcagtg tggcaccggc ttacccttct ctccaggaca
     1261 acgcctagcg aagggtggag gagtcccgga gttgtccgaa agagttgtga agacaacaga
     1321 caactccatg acaacccaaa gtaccacagg gaaatgaaaa gctgtggatt ctttcaaagt
     1381 taattaagat tgggtttgac aatggaagac ctccagaaaa tcttggctgc tgatgtg
//
