LOCUS       XM_039106051            1064 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102552073
            (LOC102552073), mRNA.
ACCESSION   XM_039106051
VERSION     XM_039106051.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106051.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1064
                     /gene="LOC102552073"
                     /note="uncharacterized LOC102552073; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 21 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:102552073"
                     /db_xref="RGD:7725305"
     CDS             498..902
                     /gene="LOC102552073"
                     /codon_start=1
                     /product="vomeronasal secretory protein 2-like"
                     /protein_id="XP_038961979.1"
                     /db_xref="GeneID:102552073"
                     /db_xref="RGD:7725305"
                     /translation="MPIPEWRWKDPLPPFTFERNGLDELEFRMNLTKPIGCIQYKLPL
                     YEGEDPGTFLTWWRHVIYIHFLPGKSFAIAYFRGKMNYQYYQMMMLMGRTLKADPDAP
                     RIFKEFVMSKMPQTGKIIIPPHVEACELVQDS"
ORIGIN      
        1 gcaccaactg cctagtgact taaggaggac actgaggagt ccattcttgg tggaatcttt
       61 agcacgttga ctctagacag tgaggcagac tgtggtcagc tggtaccgtc atggttatct
      121 caggtcacct cctcagccgt gtctcttctg ccctgtccct gaaatgaaag gtcagccctg
      181 tcctccacat ctcacttctc agctccttct ggatagctgt gcagagtctg tggtcagggc
      241 tcttcccggg aagtgtttct cccaggaggc ctctgccctg tctgtttggt tctggctgtg
      301 gctgctggtg agggacagcc gtgaccagga ctcctgacat cccagcatct cggacccctc
      361 catgctgcac cgagacctaa ccacatgctc ctcctacctc tcaccctcct gattcctctc
      421 tccctgcaac cgcgtgtact catggcctcc gactccagct cttaggcaag tggcacataa
      481 agcgctgggc aggagacatg cctatccctg aatggagatg gaaggaccca ctgcctccct
      541 tcaccttcga aagaaacggt cttgacgagc tggagttcag gatgaacctg acgaaaccca
      601 tcggctgtat tcagtacaag ctgcctctgt atgaggggga ggaccctggc acattcctca
      661 cgtggtggag gcatgtcatc tacatccact tcctgcccgg gaagagcttc gccattgcct
      721 acttcagggg caaaatgaac tatcagtact accagatgat gatgctcatg ggccgcaccc
      781 tgaaagctga cccagatgct ccgaggatct tcaaggagtt tgtgatgagt aaaatgcccc
      841 aaactggaaa gatcattatc cctccccatg ttgaagcctg tgagttggtc caagattcct
      901 agtgcactga gggagtgctg cagagtgcat gcaggaagca ggagctggga ccctggctga
      961 cctctgcacc tacatgcaga actctcagtg tccaagagca caggcccaac acctactcgt
     1021 cccccataag tctgcattca ataaatttgg tcgatatccc tcaa
//
