LOCUS       XM_039097294            3614 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102552068
            (LOC102552068), mRNA.
ACCESSION   XM_039097294
VERSION     XM_039097294.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097294.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3614
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3614
                     /gene="LOC102552068"
                     /note="uncharacterized LOC102552068; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 83% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:102552068"
                     /db_xref="RGD:7732886"
     CDS             1..1857
                     /gene="LOC102552068"
                     /codon_start=1
                     /product="uncharacterized protein LOC102552068"
                     /protein_id="XP_038953222.1"
                     /db_xref="GeneID:102552068"
                     /db_xref="RGD:7732886"
                     /translation="MADAESGVSTHFAPLLPSSLALSPCPGYPTAAVCCGSIDPPAMV
                     PTSWAAPASLETRTANFVPGAGWGPLYVEYRRRHAKAARRQAVLYLDPVSKPQVSGVW
                     TTWYLVNGTAPTVGVGRHPSAEEAQLKQYCPTFPAFIRNRDDHGEALGVQAVLGNYQQ
                     GAETESCPTKKQVLRSSKAAGQTVQEHLRGSDQIQQTAGRLPPDAVYPTPQTFLPLDV
                     ALAVQDLLEQGHQGEGADEDEEQSSVPQQIPVGRGVCVAHPGGRAPRTHCAGRGGNHA
                     RCAGGPRGPLGELPRRGQEGRGLGGAKFPVGAVAAAAAKGQGPPRGGRMSLRPALSCC
                     GFWAPVSRSRQSARGGATAGAGTGPPSRRGDDQWGSGPARLCRDPARRAAHSGLARDS
                     GRRARGAGRGTARLLPAPAAWECEGWPSMLRRRAQLYNWEGRSTSCLERFGSSSTKCL
                     NFRGPAHASGSQSVCPKTQFPHHNSDSYAVPVKMNEPTLTSCCHLPSRIYSTLTSSSE
                     ISSRTHESSCLLKNLFTPLLEDFKSLEELGRHCGRTPFGGDLSDASLVVLQDIQCDKV
                     RLSSCRGHVKATLLITVNSDLDHPVKRSSLGRLSSYPFHTVFLGRIHSAQPS"
ORIGIN      
        1 atggccgacg cagagagcgg ggtctcaacg cacttcgctc ccctgctccc ctctagcctc
       61 gctctcagcc cctgcccagg atatcccacc gccgccgtgt gctgtggatc gatagaccca
      121 cctgccatgg tcccaacctc ttgggctgca ccagcttcct tagagactag aacagctaac
      181 tttgtccctg gggcgggttg gggcccgctc tatgttgagt accgcagaag gcatgcgaag
      241 gcggcacgga gacaggctgt cctttacctt gacccagttt ccaagcccca agtctcaggt
      301 gtatggacta cttggtacct ggtcaacgga accgctccca cagttggtgt tggccgtcac
      361 ccctcagcgg aagaggcaca gctgaagcag tactgcccta ccttcccggc tttcataaga
      421 aacagggacg atcacggaga agctctagga gtccaggcag ttctggggaa ttaccagcag
      481 ggggcagaaa ccgagagctg ccctaccaag aagcaggttc taagatccag caaggctgca
      541 gggcagacag ttcaagaaca tctccgaggg tctgatcaaa tccagcagac cgcgggaagg
      601 ctacctccgg acgcggtgta tcccacccct cagactttct tacctcttga tgtagctctt
      661 gctgtacagg atctgctgga gcaaggtcac caaggcgaag gcgcagatga agatgaagag
      721 caaagttcgg ttccccaaca aatccctgtt ggccgagggg tctgcgtagc gcatcctggc
      781 ggccgggcgc cgcggacgca ctgtgcgggg cggggcggca atcacgcgcg ttgtgcgggg
      841 ggcccccggg ggcccttagg cgaactgcca cggcgtggcc aggagggcag aggacttggt
      901 ggggcaaagt ttcccgtggg cgcagtcgcg gccgcggcag caaaaggaca gggcccgccg
      961 cgtggaggtc ggatgagcct caggcctgcc ctctcgtgct gcggcttctg ggcgccggtg
     1021 tcccgcagcc gccaatctgc ccgtggaggg gcgacggcag gtgcggggac cggaccgccc
     1081 tcccgccgag gtgacgacca atggggatcc gggccggcga ggctgtgccg agacccagcc
     1141 cgacgcgccg cccactctgg gctggctcgg gattcggggc gccgtgcgcg tggggccggc
     1201 cgggggacag cgcgtctgct ccccgcgccc gcagcctggg agtgcgaagg ttggccttcg
     1261 atgctgcgga ggcgagcaca gctctacaat tgggagggcc gaagcacaag ttgcttagag
     1321 cggttcggtt catctagcac gaagtgcttg aacttcagag gacctgcaca tgcgagtggg
     1381 agccagtctg tgtgtcccaa gacgcagttt ccccatcaca actcagattc atatgctgtg
     1441 cctgtcaaaa tgaatgaacc aacattaaca agctgctgtc atctaccgtc cagaatttac
     1501 tcaacgctga cctcaagttc tgagatctca tccaggactc atgagtcctc atgtctcctc
     1561 aagaacctct tcactcccct gttggaggac ttcaagagcc tggaggagct gggcagacat
     1621 tgtggcagaa cgcctttcgg tggagacctc tcagatgcct ccctcgtggt tctgcaggac
     1681 attcagtgcg ataaggtgcg gctttcatcg tgtcgagggc atgtgaaagc aacactacta
     1741 attactgtta actctgacct tgatcacccg gtaaagcgtt cctctctagg gagactttct
     1801 tcttaccctt tccatactgt gttcttgggg aggattcact ctgcacaacc ttcctgagga
     1861 atctgtatgt cacacacctt ccagggtttt ataactacat aaactatctg gaagtatgca
     1921 tgaagaattg tctcatcttc cacttactgc ctcattaatt tgatcatttg tgtagctcag
     1981 tatggactcc cgtgtttata aagtttgagt tacagtctac tactaattta ctgatcttac
     2041 tgtacttact gcagcttacg cctgtaggca ctgctaaagg tcacgttggc ataccttcac
     2101 caacatgctt ttccattttg ttttggtgct ccctttcgtt ttgttttaag acagagtcat
     2161 ctggaactcc tgatcctcct gctgctgcgt tctcagtgct aggatgagag gtgtgtgcct
     2221 tcctgcccag cttagcatag cactgcttgt cttttcagtg ctgagataat tctagctcat
     2281 atgtttcctg cttccattct ggaatctgcc atatttccaa agagctctgg ctcctattat
     2341 tggagaatgc tttagaaacc caaatttcac caccccatgc tttccagtat gagaagttgc
     2401 tattcaaata gggcatcttc cgaactccac tttccccaat aactccttgc cagtatacag
     2461 aaataaatgt aaacacacat ttgttaatgt ggttcactta ttagtcctga aggtttcttg
     2521 tttaaggttt tctacataaa cagtcatatc atctgcataa cagagttaaa cattcctcct
     2581 ttagagcccc ctttttcttg cctccttcca tgtgctgtct tacagaactt tgattggaca
     2641 taaagctgtt gaagaatggt agccattgtc atttcgctac taacattttg gggaacaaac
     2701 acatggcatc ttacattggt tatgattcta gctatcatct tttcatgggt attctttacc
     2761 aacttgagga agttcccatc tatatctcgt ttgctgagag tatcatgaat gggtatttgt
     2821 ttgttttttt aaatgagttt cttatcctga atctattaaa atgttattat ttttctcctt
     2881 tattactgta tgtaatttgc acaaagtaaa aattaccctt ttcggtggat agccccatgt
     2941 gttttaacaa aaacgggctt ttaaaattgc tataaaaatt aattaatggg ttctagggag
     3001 agagagaact tagtttgtaa gtgcttgcta ctcaagccta agaaacttga gttccatggc
     3061 caattctcac aaaaaatagc caggcctggt ggcccaaact tgtagctctg agatggagag
     3121 aaatctgtgt ggcctgctgg ctggctcaag gccaattaga gacgctgtct aaaaacaaac
     3181 agcacatgtc cttcctccca gttctacggt gtcctcaggc ttcaggccag gcgtgacctt
     3241 gttaccagca tctgctcctg tgtctttcac tagtccccag tgccagccct gctctcttgc
     3301 agcttcactg tcagaagtta tacgggatca cctccatgcc atcaaggatg acttccagat
     3361 tgggaggtcg atatgcagaa cgtgccttga cttatacttt ctgcaggagt ttgcttattt
     3421 ataactttag aatatttgaa gacaacacag tagaaatatg catgctactc gctgggctcc
     3481 ctccttcttg tcagccttgt ttgactttat tcttgtggaa gtcatgcagt attcatttgg
     3541 ggtcactgtg ccaataattt gccttctgga ttcttggccc tgtgttttct ttgtgtgtac
     3601 ctttattgcc ccat
//
