LOCUS       XM_039087579            2461 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102551980
            (LOC102551980), transcript variant X1, mRNA.
ACCESSION   XM_039087579
VERSION     XM_039087579.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087579.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2461
                     /gene="LOC102551980"
                     /note="uncharacterized LOC102551980; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 11 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 110
                     samples with support for all annotated introns"
                     /db_xref="GeneID:102551980"
                     /db_xref="RGD:7527378"
     CDS             129..1961
                     /gene="LOC102551980"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038943507.1"
                     /db_xref="GeneID:102551980"
                     /db_xref="RGD:7527378"
                     /translation="MNALTYDDVHVNFTREEWILLNPSQKNLYKDVILETYRNLTAIG
                     YNWEDHNIEEHCQSSRRHTRHEGSPPGEKPSEYTQCGKALAYHSYHQRHERIHTGEKP
                     YEGSQCGEFAYQSSLQIHKRTCTKEKPYKCNQCDKAFSQHGYLRTHKRTHTGQKPYEC
                     NQCGKAFVYRCYLRIHERTHTGEKPYKCNQCDKAYSQHSHLQIHRRTHTGEKPYKCNQ
                     CDKAFACPSHFQRHERIHAGEKPYKCNLCDKAFACQSSLRIHKRTHTGEKPYECNYCG
                     KAFAYHGQLKVHKRSHAGEKSYEDIQYHEVFAYHSSLQIYKRTYGGERLYECNQCGKV
                     FACPSNLQIHNRTHTGEKPYKCNQCDKTFSQYNNLQIHKRTHTGEKPYECNYCGKAFA
                     YHGYLHIHKRMHTGEKPYQCNECDKSFSQQSYFQIHKKTHTGEKPYECKQCGKSFASH
                     GQLQRHERIHTGEKPYKCNECDKSFSQQSYFQIHKKTHTGEKPYECKQCGKSFAYHGQ
                     LQRHEKVHIEEKPYKCSDCGKAFTCRFNLQRHKRTHTGEKPYECNQCGKAFAYHDYLQ
                     IHKRTHTGEKPYECSQCGKSFLCHSSLRIHRRIHIGDKPHECDR"
ORIGIN      
        1 cttccgggta ccgtgaggca gtttccactt actggctggc tgagcaggct tgaatgaata
       61 gatagatgag ctctgaggct tgcagttggg tgctgtgagg tgcgcttggc aagctccgaa
      121 gttgcgacat gaatgcactg acctatgatg atgtgcatgt gaacttcact cgagaagaat
      181 ggattttact gaatccttca cagaagaatc tctacaaaga tgtgatactg gagacctaca
      241 ggaacctcac tgctataggt tataattggg aagaccataa tattgaagaa cattgtcaaa
      301 gttcaagaag gcatacaaga catgaaggaa gtcctcctgg agagaaaccc tctgaatata
      361 ctcagtgtgg taaagccttg gcctatcaca gttatcatca acgacatgaa agaattcata
      421 ctggagagaa accctatgaa ggtagtcaat gtggtgaatt tgcataccag agtagtctcc
      481 aaatacacaa aagaacatgt actaaagaga aaccctacaa atgtaatcaa tgtgataaag
      541 ccttttcaca acacggttac ctcagaaccc ataaaagaac acatactgga cagaagccct
      601 atgaatgtaa tcagtgtggt aaagcctttg tatatcgctg ttatcttcga atacatgaga
      661 gaacacatac tggagagaaa ccctacaagt gtaatcaatg tgataaagcc tattctcagc
      721 acagtcatct tcaaatacat agaagaacac atactggaga gaaaccttat aaatgtaatc
      781 aatgtgataa agcatttgca tgtcccagtc attttcagag gcatgaaaga attcatgctg
      841 gagagaagcc ctataaatgt aatctatgcg ataaagcctt tgcatgccaa agtagtctcc
      901 gaatacataa aagaacacat actggagaga agccctatga atgtaattat tgcggtaaag
      961 cctttgcata tcatggtcaa cttaaagtac ataaaagatc acatgctgga gagaaatcct
     1021 atgaagacat tcaatatcat gaagtgtttg catatcacag tagtctccaa atatataaaa
     1081 gaacgtatgg tggagagaga ctatatgagt gtaatcaatg tggtaaagtc tttgcatgtc
     1141 ctagtaacct tcaaatacat aatagaacac atactggaga gaaaccctac aaatgtaatc
     1201 aatgtgataa aaccttttca cagtacaata atcttcaaat acataaaaga acacatactg
     1261 gagagaagcc atatgaatgt aattattgtg gtaaagcctt tgcatatcat ggttatcttc
     1321 acatacataa aagaatgcat actggagaga aaccttacca gtgtaatgaa tgtgataaat
     1381 ccttttcaca acagagttat ttccaaatac ataaaaaaac acatactgga gagaaacctt
     1441 atgaatgtaa gcaatgtggt aaatcctttg cctctcatgg tcaacttcaa agacatgaaa
     1501 gaattcatac tggagagaaa ccttacaaat gtaatgaatg tgataaatcc ttttcacaac
     1561 agagttattt ccaaatacat aaaaaaacac atactggaga gaaaccttat gaatgtaagc
     1621 aatgtggcaa atcctttgcc tatcatggtc aacttcaaag gcatgaaaaa gttcatattg
     1681 aagagaaacc ttacaaatgt agtgactgtg gtaaagcctt tacatgtcgt tttaatctcc
     1741 aaagacataa aagaacacat actggagaga aaccttatga atgtaaccaa tgtggtaaag
     1801 cctttgccta tcatgattat cttcaaatac ataaaagaac tcatactgga gaaaaaccct
     1861 atgaatgtag tcaatgtggt aaatcctttt tatgtcacag tagtctccga attcatagaa
     1921 gaatacatat tggagataaa ccccatgaat gtgatcgtta aagtaaagcc tttgcaaggc
     1981 acaatgatct tcaaaggcat gaaacaaatc atactaaaaa gaaaccctat aaatatactt
     2041 aatatggtga cgcctttgta catttctatg gtcttcattg tctcaaatca gtcatactgg
     2101 agagacaccc tatgaatgga agcaatgttg ttaagccttt gctcttcata gttatcttta
     2161 aatgcagaaa agactacata ctggagagaa accttctatt gtactcaatg tcataaagcc
     2221 tttgagttat gagggctgct tagatccaac acacctcaaa caccaggtca atgcaattca
     2281 caagaattca ttgtaatcag gccacctctg atctgtggaa ctgcaacccc aagccagaat
     2341 gttatagagc tttttttttt ttttaagatt tattatatct aagtacactg cagctgtctt
     2401 cagacacact ggaagggggc atcagatcac attacggatg gttgtgagcc accatgtggt
     2461 t
//
