LOCUS       XM_039084660            7377 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus U3 small nucleolar RNA-associated
            protein 14 homolog B-like (LOC102551819), mRNA.
ACCESSION   XM_039084660
VERSION     XM_039084660.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084660.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7377
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7377
                     /gene="LOC102551819"
                     /note="U3 small nucleolar RNA-associated protein 14
                     homolog B-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 ESTs, 2 long SRA reads,
                     5 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 198 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102551819"
                     /db_xref="RGD:7514331"
     CDS             284..2566
                     /gene="LOC102551819"
                     /codon_start=1
                     /product="U3 small nucleolar RNA-associated protein 14
                     homolog B"
                     /protein_id="XP_038940588.1"
                     /db_xref="GeneID:102551819"
                     /db_xref="RGD:7514331"
                     /translation="MARNVADLLALSQQEELVDLPDSYPLSTSEDEGDSDGERKCQKL
                     LEAVSSLGRTNKWKLAERSEASLMVSEFNVTSEGSGEKLVLSDLLGSATELSSLATVK
                     KQLQRIKSKTLTIPLNKEVADRTLREAAFSKTSQMLSKWDPVVLKNRQAEQLVFPMEK
                     ELPAVAPIEHVFTGWKARTPLEQEVFNLLHKNKQPVTDPLLTPMEKASLKAMSLEEAK
                     IRRAELQRTRALQSYYEARARREKRIKSKKYHRVLKKGKAKKALKEFEQLWKDCPSAA
                     LQELEKMEKARMTERMSLKHQGKGKWAKSKAIVAKYDLEARKAMQEQLAKNRELTQKL
                     QVVSESEEDDEGTEERIVPVSDGMDDLRMNADAVNPWMLSSCNSSAEGGDIKTDPEQI
                     PEFVTHASSESEGDERPVAEELVLKERSFQERVDSNNAKPLDIQETEDSNSQEVLSES
                     RILLQKLNKENHQSEDQEVSSVETVLHIQREDLASEKFLVLQRLERAHVLEQRGELGK
                     EEHYPKKELSGPVLKGVWKEMNPPTHPDASGGKKKKEQMIDLQTLLTTPSPPVKSLAV
                     PTVQELEDEVETDHKQLIKEAFAGDDVIREFLKEKREAIEANKPKDLDLSLPGWGEWV
                     GMGLKPSAKKRRRFLIKAPESSPRKDKNLPNVIINEKRNIHAAAYQVRAVPHPFTHHQ
                     QFERTIQNPIGYTWNTQRAFQKLTVPKVGTKLGHIIKPIKAENVGYHSSSRSDLSILQ
                     SNRKCLSRKQQKQLKKSSAD"
ORIGIN      
        1 tgtttacttc aagctgacct tgaacttgct gtgaggctca ggttggcctt gaacttgaga
       61 ttcatctgcc ttagcctcct gagtggcaaa tcaccatctt gggttgctga gtggattgcc
      121 atccgtgtat gtaaaacttg acatctcaat aagtaagatt ctcagaaaac atctatgtca
      181 gagaaagtgg gcaataaata gatgaagcca aagatgagtg agaccagaca cttcttcaag
      241 agctttcagg ccctgtaaga ggaagcaggc tgctaccacg aaaatggcca ggaatgtggc
      301 cgaccttttg gctttgagcc agcaggaaga actagtggat ttgccagaca gctacccact
      361 gagcacaagt gaagatgaag gggacagtga tggagaacgg aaatgtcaaa agctcctgga
      421 agcagtcagt tcccttggta gaacgaataa atggaagttg gcagagagat ctgaggctag
      481 tctgatggtg tcagagttca atgtcacttc tgaaggatca ggtgaaaaac tggtcctttc
      541 ggatttgctt gggtctgcta cagagttatc ttcattggct actgtgaaaa aacagctgca
      601 aagaatcaag tcaaagactc ttaccatacc ccttaacaaa gaagtggctg accggaccct
      661 cagggaagca gcattcagca aaacctcaca aatgctctcc aagtgggatc ctgtcgtgct
      721 gaagaaccgg caagcggagc agttggtttt tcccatggag aaggaactgc cagcagttgc
      781 tcccattgaa catgttttca ctggctggaa agcaagaacc cctctggaac aagaagtttt
      841 taacctcctt cataagaaca agcagccagt aacagaccct ttattgactc ccatggaaaa
      901 agcctccctc aaagccatga gcctagaaga agccaagata cgccgagcag agcttcagag
      961 gactcgagct ctgcagtcct attatgaggc tagagctcga agagagaaga gaatcaagag
     1021 taaaaagtac cacagagttc taaagaaagg aaaggccaag aaagccttaa aagagtttga
     1081 gcagctgtgg aaggactgcc caagtgctgc attgcaagaa ctagaaaaaa tggaaaaggc
     1141 cagaatgaca gaacggatga gccttaagca ccagggcaag gggaaatggg caaagtctaa
     1201 ggcaattgtg gccaagtatg acctggaggc tcgaaaagct atgcaagaac aattggctaa
     1261 gaacagagaa ctgacacaga aactccaggt agtttcagag agtgaggaag acgatgaagg
     1321 cacagaggag agaatagtcc ctgtctctga tggaatggat gacctacgga tgaatgcaga
     1381 tgctgtaaat ccctggatgc tgagcagttg caacagcagt gcagaaggag gtgacatcaa
     1441 gacagaccct gaacagatac ctgaatttgt gacccatgca tcttctgaga gtgagggaga
     1501 tgaaagaccg gtggcagaag aacttgtgtt gaaagaaaga tcctttcaag aaagagttga
     1561 ttccaacaat gctaagccat tggatatcca agaaacagaa gactctaata gccaggaggt
     1621 attatctgaa tcgagaatat tgcttcagaa actcaacaag gaaaatcatc aatctgagga
     1681 tcaagaagtg agttcagtgg aaactgttct ccatatccag agagaggacc ttgcctcaga
     1741 gaagttcttg gtgctccaaa ggctagagag agcacatgtt ctggagcaac gaggagagtt
     1801 gggcaaagag gaacattatc caaaaaagga gctttccgga cctgtgttga aaggggtgtg
     1861 gaaggaaatg aatccaccca cccaccctga tgcctctgga ggaaagaaaa agaaagaaca
     1921 aatgattgat ctacagaccc tcctaactac tccgtctcct cctgtgaagt ctttggcagt
     1981 gcccacagta caggagttgg aagatgaagt ggagacagat cacaagcagc taataaagga
     2041 agcttttgct ggggatgatg tcataagaga gttcttaaaa gagaaaaggg aagctataga
     2101 ggcaaataaa ccaaaggact tagacctatc attgcctgga tggggtgagt gggttggtat
     2161 gggcctaaag cccagcgcca agaaaagacg ccgttttctt attaaagctc ctgaaagttc
     2221 tccaagaaaa gacaagaatt tgccaaatgt gattatcaat gagaagcgca acatccatgc
     2281 agctgcttat caggtgcggg cggtcccaca cccattcacc caccatcagc aatttgaaag
     2341 aactatccag aaccctattg ggtacacatg gaatacccag agggccttcc aaaagctgac
     2401 agttcccaag gttggcacca aactaggcca tatcattaaa cccataaaag cagaaaatgt
     2461 aggataccac tcttcctcaa ggtctgacct ctctatccta cagagcaatc ggaagtgcct
     2521 ctccagaaag cagcaaaaac aactgaagaa aagttctgca gactgagctg ccagcagagt
     2581 agcatctttg ttcctgggac taggaacctc taatgtttct tttggttgta tcatcattct
     2641 tcagggtcat ttcctaaatt gacggaactc tgtacttaag ccacattata gaaataaggc
     2701 atttttatct agtaaaaagc ttacattcca ttttgagata tatgataaat ttagaaatga
     2761 ttcattcatg gaaaaatgta gagttacctg tataggtgcc tatcctaggc ttagagagag
     2821 atgagtagac agagaagttc aggctgtgat tgggcagagg aagcataggc agcagaaaat
     2881 gctaagtagt ttagatatta agttaataga tcctgatata gtggctcctg tgtaatccag
     2941 cattctgaga ggttgaggat catttagttg agaccacaga atgagaactt ggctcaaaaa
     3001 caaaacaagc ccaaaaggat tctaggaaga gttaacagga agaatgagca aatttagaga
     3061 cttggagaag acagacaatg aagatagagg agaatagaac ttaataatgt gttgcatgtt
     3121 acaactaagg ttatagtctg ccatgcctag acagctttcc tagtgcaaaa gggaacctga
     3181 ccccaatctt ttacctgagg aatgtcatgt aatccttgga ggaaattaca ggttcaattt
     3241 cctggaatgt cttttcatgc aaatgaggta tcccctgaac cttaaacctc agctaatgaa
     3301 acttcacctt aagaagaatt ccttcccact cttccaggat taatatatat agcccttgac
     3361 tcaccctaaa taaagtatat gtgcacaaac tgtttcattg actactaaga gagctgtttt
     3421 ctaaaagttg taacactgaa atcttcagga tcccccatcc ccagcattct ctgccagacc
     3481 tggatcctgc tgacccacca gttctagact tcgcttcatc tttcctgcct ggtgtgtaaa
     3541 ggaagaatca gaccgcagaa ctcggcttca gtccatcctt ccctgcctgg catactgtgg
     3601 aacttggctc cgctctattc ttccttcccc ctttagtgtc tagtagctcc tggacatctc
     3661 aagggaagaa gcagaagaac agaaacacaa agtgtgacag agaattgggg gtactgaaaa
     3721 atcagttatg gagggcctta aatgcattgt agagaaattt agaattcttt tcatctctta
     3781 ggcaaagtag aggaagtaag acttggatag aggattgttg tgacatttga gttaaaggag
     3841 tgagtgccca gctggcatcg tgcatgcagg atgtattgta tgagtagggg taagagttaa
     3901 gaatgtcagc tgtagaagtt agggtgagca tgggcaggag ggctggatga caggaagtag
     3961 aataaatcac ctggcaagag ctctggagtc agggaggaaa gggatttttt tggatacctt
     4021 gacatttgag cagggttttg gacctgggag aatttagctt tccattttta cttattcttg
     4081 gaaagatgga aggatatatt gaagtgggat gcagaattca ggttttagaa aattcttgta
     4141 tatttttaga acgtaaaact acatggtaga atgtccctgc aatcccagca cttgggatca
     4201 ggcagaagca ggaggatagc tgagagttaa aggccaggaa gggactacaa gtaagaatca
     4261 gttagaggag gggtcttgag ataggtgatg gccagattgt ggagtgaggg agtggtaaag
     4321 ctgactcttt gaatatgggc aaggggtcat gtccagagta cgggccatag agagcagatc
     4381 agtagatgaa ggactctgag gcactcagag accattataa cgattcattt ttaaaatgct
     4441 gacttaattt tcttttgata ggaatcttgt tttagggatc cacacatcaa acttttttgt
     4501 atttctgcct tgtttagctg gggtcatttc agtgaggcac tgttgttgaa catagtgttt
     4561 accataaagg aatacattct gtggcaacat ttgagtatga caaaaacaga ggctttaaat
     4621 ataggatcac aggaatttct aagcttataa aatatataaa catatataaa ttatatgatt
     4681 ataggaaaag ttgctatcta agttactaat tttttttcct tttccaccat tgtgccttaa
     4741 accatggcct taggaaatct gggcaagtgc tctgttactg agctacagcc tcagctttgt
     4801 ttctcttttt gacagggtct tgctgtgcaa cttagactgg ccttgactag tccataggcc
     4861 aggctggcag gttggcttgg ctttgaactc tattctgcct ctctggtaat cccccatgat
     4921 taataataat tctttttcta tggcactagt cttgaactca cagaacttct gtatgctatt
     4981 catgagttct gtcaacaagc tgtatctgta gccgcctccc cacattcaga actgtgcccc
     5041 tactagggga tttttttctt ttttgtttta aagaccgtgt cttttttttt tttttttttt
     5101 ggttcttttt tttcggagct ggggaccgaa cccagggcct tgcgcttcct aggtaagcgc
     5161 tctaccactg agctaaatcc ccagccctaa gacctgtctt tttaagttgc ccaggccagg
     5221 tttgaactca ccatttagtt ctgttagtcc ttgaacttag aatcttacag cctaagcttc
     5281 tggagtagcc aggtttatag gcatgtatca ctgctcaaac aactcattat ttaacatttg
     5341 taattcgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgcactt cagtgactga
     5401 ctgcacacgt ccatccactc cactcaccca cccacgtgat gtatctttca ccagggtctg
     5461 tgatgatggc cactaggcat tgagtaatga gtagacactt tgttcttcat gcatagagaa
     5521 gagggcagta agcagtttta taagcagtta tttaattaca ggcacagtag gtactgctaa
     5581 ggcaaaacag aatgtggtga gagtggaaag ctttaagtag ggttggacaa gtccagtcgg
     5641 agagggtagt agcagggagg taggggaacg ggaagcatgc taggccaaag acttacagca
     5701 ggtgggatga ggtggagacc tgacattgga cagtacacaa ggcccagaag gtgagtactc
     5761 tgtggagact cttaggtagt actggaccta aagtagaaga ccccagatca gagaaaggta
     5821 aaaggcaaac gtcctctcaa aggctatgag ctgtggtggg agaattagag aagttgcaga
     5881 ttgtgctgag ccagctgacc agcagtgtct caagtcagtt tgttgtttcg gtctcacact
     5941 ataaaaaggt tttattacta caagacatgg aaagagttaa catttatctt cttgtggttt
     6001 gcattatatg attaggaatg tcagaattta ctaaagttct attttgacaa agtatttata
     6061 aaaatttaac ttatgcccaa ttataattta ttttaatata ttagacttag aatttagtct
     6121 ttttagtcag attacataaa atttataatt ctatagagtt tttttttttt tttttggtca
     6181 taaagttctc caagctgtct tcaaactcat aatctcaaag tctgcctacc tgtgctacca
     6241 tgcctggttt aagttgtatg ttgttttaag caaggtccca cattgtagct ctggcttgcc
     6301 taaacttgct atgtagatta gactgtattt gaaattgtag ccattctgct tcagccctct
     6361 cctaaaaccc ctggcctctc tccctccctc cctccttccc tctcctcctt cccttccctt
     6421 ccctccctcc ttccctttca ttctttcttt tttttttttc cctttctttt tttggagctg
     6481 gggaccgaac tcagggcctt gtgcttgcta ggcaagcgct ctaccactga gctaaatccc
     6541 caacccctct ccctctcttt cttatgacaa ggtctctgtg gaaccctggg taccctggaa
     6601 ctttgttata tagaccaggt tggcctggag ctcacagatt gactggcctc tctacctctt
     6661 aaatgctggg atcatcagga accatgtttc aagttgtatg attagaacat atatttcaag
     6721 ttaggattct ccagattctg tttagtttgt ttaaaaagag tcatacactg gctcagtggt
     6781 ttgtgatttt tagtttataa aatttgttcc tgtctgaatg tgtggaaata atttgttcac
     6841 atatccttga gcatttactt gattataaca gtatatgttc tctatgaaaa gtagaaaaca
     6901 acataaagtt gaaaatttaa aaatcagtac taattttgca tccaaaatat ggccactgct
     6961 gatattttgt ttgctaacaa gtgcaactat attgtgcata ttcaatattc agcctactct
     7021 tccttgttaa tatgtcacaa gtaattacag tgttaacaga tgtttgaaat atttgtagtg
     7081 gctatatagt catctaatga atgtacgtgt cacagtgcat ttgatatttc ccagttactg
     7141 tgtatttgcc tatacagtgt taacagatgt ttgaaatatt agtagtggct atatagtcat
     7201 ctaatgaatg tacgtgtcac agtatgtttg atattttcca gttaatgtgt atttgcctat
     7261 ttccttttga gtgcctgtta caaatgactt attaaagatt cctagaagtg aaacattggg
     7321 ttaaaggcta tgaaaaagtt tagtgctctt aataaaaatt ataaacttgc tttccaa
//
