LOCUS       XM_039082789             928 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus stathmin-like (LOC102551813), mRNA.
ACCESSION   XM_039082789
VERSION     XM_039082789.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082789.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..928
                     /gene="LOC102551813"
                     /note="stathmin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 ESTs, 27 Proteins, and
                     96% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:102551813"
                     /db_xref="RGD:7697767"
     CDS             1..534
                     /gene="LOC102551813"
                     /codon_start=1
                     /product="stathmin-like"
                     /protein_id="XP_038938717.1"
                     /db_xref="GeneID:102551813"
                     /db_xref="RGD:7697767"
                     /translation="MAGPESVQPVSCLLSNVASSDIQVKELEKRASGQAFELILSPRS
                     KESVPEFPLPPSKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKA
                     IEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHVEEVRKNKESKDPAD
                     ETEAKLFRELTFSPTPS"
ORIGIN      
        1 atggcaggtc cagagagtgt acagccagtc tcttgtcttc tgtccaacgt ggcatcttct
       61 gatattcagg tgaaagagct ggagaagcgt gcttccggcc aggcttttga gctgattctc
      121 agccctcgat caaaagaatc tgtccccgag ttcccccttc ccccctcaaa gaagaaggat
      181 ctttccctgg aggaaattca gaagaaatta gaagctgcag aagaaagacg caagtctcat
      241 gaagcagaag tcttgaagca gcttgctgag aagcgggagc atgaaaaaga agtgctccaa
      301 aaagctattg aggagaacaa caacttcagc aaaatggcag aggagaaact gacccacaaa
      361 atggaggcta acaaagagaa ccgggaggcg caaatggctg ccaagctgga gcgtttgcga
      421 gagaaggaca agcacgttga agaggtgcgg aagaacaaag aatccaaaga ccctgcggac
      481 gagaccgagg ctaagttgtt ccgagaactg actttctccc cgaccccttc ctaaatatcc
      541 aaagactgta ctggccagtg tcatttactt tttccctcct gacaaatatt ctagaagctg
      601 atgtaggacc gtataggtag atccagaccg tgagatattt taggggctca aggggagaaa
      661 ctgaaagtgt tttgctcttt tttaaagtgt tggtctttct aacgtagcta tttttctcgt
      721 tgcatctttt ccactcgggc acactcggtg tgctgggtca atggctagtg ctgtattgac
      781 tgtggaagac gttcgtgaag agtatgtagt ggcttcttcc aacccattag atgctgagta
      841 tctgttcact ttgcgatccc aattctgtcc caatctcacc agatgctact gtacttgaat
      901 ggttaataaa ctgcacagtg ctgttggt
//
