LOCUS       XM_039082566            2244 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102551788
            (LOC102551788), transcript variant X1, mRNA.
ACCESSION   XM_039082566
VERSION     XM_039082566.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082566.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2244
                     /gene="LOC102551788"
                     /note="uncharacterized LOC102551788; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 5 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102551788"
                     /db_xref="RGD:7718778"
     CDS             574..1896
                     /gene="LOC102551788"
                     /codon_start=1
                     /product="uncharacterized protein LOC102551788 isoform X1"
                     /protein_id="XP_038938494.1"
                     /db_xref="GeneID:102551788"
                     /db_xref="RGD:7718778"
                     /translation="MPRAKERKQKPKGAAPSVVPILQKFLKTYQKHCIQSRTSMCPAI
                     QRDLKSSIDREQFLRKFMLVRAGNSAVSTLPVSLEPLLMTIRDESYALAKEICIWGLQ
                     LTNPEIARLALFLEQKGYTTCPMTTLEIVDCKMDLWSLGRLGKALQFSSLHFLVLDYC
                     KFGNEELERIFAGLESNQRLQGLSMRYCGLGPWSGPRLGSVISHSAICELHLDGNYLQ
                     CSGTLALLRPIAEYAEMQRKDQPTLASPHAGNPPQLPQVCQGASSTSSQIVKSSKILT
                     AKKTSQKKSGKGGIRKKVKRLTEAGPWIVMLHLADNSIDGTGREGEQLLELTRTLTCL
                     IKYSTHLRELDLGNNVLGETAAAGILEALRARKSGKLPPLKVTVTPRISSDTFRSIWK
                     LSKKSNTTRKKKKKVNSSTSAQLGGSHQGALDEAWASVEIDGAFDPKV"
ORIGIN      
        1 ggactggcct gccaggatga aggcgagcat tatcccctcc aggtttgccc ccgcccccat
       61 cacactcgaa gttgtctttg cgagataagg tgtcctgcca cacgcctcag agtgggaacg
      121 tctatccctc caggccttcc cctttcctac tgcctggaag gccttaacgc caaagccatt
      181 gcctacagcg agattcttac ttccttcttc acattcagcc tctgtcgcaa gctcaagctt
      241 ccgtctctat ggcgacagct gacgcgggaa gcagggctgc aaaacttgga cagtactcag
      301 cacctgcacc tgtggggtag cctggggtag tcggggtttc aaaggtccca tgcgaggaca
      361 ctgccctccc tccccactcc acccacaccc ctaggacctg ctctgcgctt ccctgcctcc
      421 aaggtaactg ggattctctg tgcccccttg agctctgact ctcacctcct ctgactgtgt
      481 cctcggtccg tttccagagg gaggggcagt ctccagatga gatgataaag cctaggcacg
      541 cagaaaggaa gtggaatcaa acacggtaaa acaatgccga gagcaaagga aagaaaacaa
      601 aaacccaagg gggctgcccc ttcggtggtt cccattcttc agaagttcct gaagacctac
      661 cagaagcatt gcatacagtc tcggacctcc atgtgtccag ccatccaaag ggacctaaag
      721 agcagcattg acagagagca gttcctcagg aagtttatgc ttgtgagagc tggaaattcc
      781 gcagtaagca ctttacctgt ctccttggag cctctgctta tgacgatccg agatgagagc
      841 tacgctctgg ccaaagagat ctgcatctgg ggccttcagc tgacgaaccc ggagatcgcc
      901 aggctcgctt tgtttctgga gcagaagggg tacaccactt gccccatgac aacgttggaa
      961 attgttgatt gcaagatgga tctgtggtct ctgggacgac ttgggaaagc tctgcaattc
     1021 agcagtttgc atttcctggt cctcgactac tgcaagtttg gaaatgaaga acttgagagg
     1081 atcttcgcag gcctggagag caaccaaagg ctgcagggcc tcagtatgcg ctactgtggg
     1141 ctagggccct ggagtgggcc aaggctgggc tctgttatca gccacagtgc catttgtgag
     1201 ctgcacctgg atggaaatta cttgcagtgt tctggaacac tggctctcct cagaccaata
     1261 gcagaatacg cagagatgca gaggaaggac cagcctacct tggcatcacc acacgctgga
     1321 aacccccctc agcttcccca agtgtgccag ggagcaagct caacttccag tcagattgtg
     1381 aaatcttcca aaattttaac agcgaaaaag acctcacaga agaaaagtgg aaaaggagga
     1441 atcaggaaga aagttaaacg cctgacagaa gctggccctt ggatagtgat gctgcatttg
     1501 gcagataaca gcatagatgg gacaggaagg gagggagagc aattgctgga gctcactcga
     1561 actttaacat gcctcatcaa atactcaact cacttaaggg aactggacct tggaaacaat
     1621 gtcctggggg aaacggctgc agcgggcatc ctggaagcac tgagggccag gaagtcaggt
     1681 aaactgccac ccctaaaagt tacagtcact ccccggatct cttctgacac cttcagatct
     1741 atttggaaac ttagcaagaa atccaatacg acccgtaaaa agaagaaaaa ggtaaattct
     1801 tcaacatctg cacagttggg tggcagccat cagggggcgc tagatgaagc atgggcctca
     1861 gtggaaattg atggtgcctt cgatcccaaa gtctagggtc taggccatct ccccgctccc
     1921 ccaaactata gtcaaatgga tgatggctat ttcaaaaggc aagcagcaag acaacatcat
     1981 ctctcaaaga ttagtgaaaa ctacctccag tttcaactca tcttccctgc tgggatcggc
     2041 caggagcctc atctctgctc ttaggtgtct gtgctgcctc gtgggagatg atgttttaca
     2101 aatgctcatt ctccactgca taaaattgaa cttttaaaaa aagatttatt tatgtatatg
     2161 agtacactct agctgtcttc agacaccaga agagggcctc agatccaatt aaagatggtt
     2221 gtgagccggg gctggggatt tagc
//
