LOCUS       XM_039099434            4410 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 728-like
            (LOC102551340), mRNA.
ACCESSION   XM_039099434
VERSION     XM_039099434.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-115               JACYVU010000009.1  7916765-7916879     c
            116-242             JACYVU010000009.1  7912299-7912425     c
            243-338             JACYVU010000009.1  7911761-7911856     c
            339-2854            JACYVU010000009.1  7900948-7903463     c
            2855-3924           JACYVU010000009.1  7899877-7900946     c
            3925-4410           JACYVU010000009.1  7898717-7899202     c
FEATURES             Location/Qualifiers
     source          1..4410
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4410
                     /gene="LOC102551340"
                     /note="zinc finger protein 728-like; The sequence of the
                     model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     deleted 1 base in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     ESTs, 28 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 122
                     samples with support for all annotated introns"
                     /db_xref="GeneID:102551340"
                     /db_xref="RGD:7697243"
     CDS             119..2965
                     /gene="LOC102551340"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: zinc finger protein
                     728-like"
                     /protein_id="XP_038955362.1"
                     /db_xref="GeneID:102551340"
                     /db_xref="RGD:7697243"
                     /translation="MLSFRDVAIDFSAEEWECLDLAQWKLYRDVMLENYNNLVFLGLA
                     SCKPYLVTFLEQIQEPSDVKGRATTTMHPGGKCCTCKVCGRVFEWTKVFQNHQIIDLG
                     VKGYECEECTKYTHIPSLLPEEKTIHTVEKPYKCEVCGKAFCIPLLLSKHKIIHTEEN
                     PYKCDLCGKAFQHPSRLSRHKKIHSGDKPYKCEVCGKAFHFPSLLLVHKRIHTGEKPY
                     KCEVCGKAFHYPSILSKHKRIHTGEKPYKCEVCGKAFHISSFLSKHKIIHRGEKPYKC
                     DVCGKAFHYPSRLSNHKKIHSGEKPYKCEVCGKAFRILSLLSKHKIIHTEENPYKCEV
                     CGKAFDYPSRLSTHSKMHTEEKPYKCEACGKAFRSLSSLSKHRRIHTGDNYYNSEVCG
                     KAFIYPLRLSKHKKICTGEKPYKCEVCGKAFNDSLVLSKHRAIHTGEKLYKCDVCGKA
                     FYYPSRLNNHRKIHSGEKPYQCEECGKAFCFPSSLSKHKRIHTGEKPYKCKECDKAFR
                     SLSSLSKHRRIHTGEKPYKCEVCGKAFHYPSLLSKHKITHTEEKPYKCEVCGQGFHVP
                     SKLSHHKIIHTGESPYKCEVCGKAFCIPLLLSKHKISHTGENHSNSQLSKKAFIYPSR
                     LSKHKKIHKRVKPYKCEVCGKAFRFPSLLLIHKGIHTGEKPYKCEECGKAFYYPSLLS
                     KHKRVHTGEKPYQCEVCGKGFHVSSSLSKHRIIHTGEKPYKCEVCEKAFRFSSSLSKH
                     KRIHTGKKPYKCEECGKAFHFPSLLSKHKISHTGEKPYNCDLCGKAFYYPSLLSKHKM
                     IHTGEKPHKCDICGKAFHYPSKLSNHKKIHTGEKPYKCEVCGNVFCFASSLSKHKRIH
                     TGENPYKCDVCGKAFYYPSLLCHHKIIHTGEKPYKCEVCGKAFHYPSLLSKHKIIHQE
                     RNPTSVKYVAKPSIIHHDFPNIKKFMGLERWLRS"
ORIGIN      
        1 caattatgac gtcaccaaaa ggggctgttg gtatcaaact tccggattct tcttaaacct
       61 cgcttctccc caaagttaag cttgctcaga ctgggtttgg atctctgaca ttgaggaaat
      121 gctttcattc agggatgtgg ccattgattt ctctgcagag gagtgggaat gcctagacct
      181 tgctcagtgg aaattgtaca gggatgtgat gttggagaat tacaacaacc ttgtattctt
      241 gggtcttgct tcctgtaagc catatctcgt cacatttctg gagcaaatac aagagccttc
      301 agatgtgaag ggaagagcaa ctaccactat gcacccaggg ggaaaatgct gtacctgcaa
      361 agtatgtggc agagtctttg agtggacaaa agtgtttcaa aatcaccaga taattgattt
      421 aggagtgaag ggctacgagt gtgaagaatg taccaagtac acccatattc catcattact
      481 tcctgaagag aaaacaattc atacagtaga aaaaccttac aaatgtgaag tttgtggaaa
      541 ggccttctgc atcccattat tactttcgaa acacaagata attcatacag aagagaatcc
      601 ctataagtgt gatttgtgtg gcaaggcctt ccaacatcct tcaagacttt ccagacataa
      661 gaaaattcat tcaggagaca aaccatacaa gtgtgaagtg tgtggcaagg ccttccactt
      721 tccatcgtta cttttggtac acaagagaat tcatactgga gaaaaaccct acaagtgtga
      781 agtatgtggc aaggccttcc attatccatc aatactctct aaacacaagc gaattcatac
      841 aggagagaaa ccctacaagt gtgaagtatg tggcaaggcc ttccacattt cttcatttct
      901 ttctaaacac aaaataattc atagaggaga aaaaccatac aagtgtgatg tatgtggcaa
      961 ggccttccat tatccatcaa gactttccaa ccataagaaa attcattcag gagagaaacc
     1021 atacaagtgt gaggtatgtg gaaaggcctt ccgtatttta tcactacttt ctaagcacaa
     1081 gataatacat acagaagaaa atccctacaa gtgtgaagta tgtggcaagg ctttcgatta
     1141 tccatcaaga ctttctaccc attcaaaaat gcatacagaa gagaaaccat acaagtgtga
     1201 agcctgtgga aaggccttcc gctctctgtc atcgctttct aaacacagga gaattcatac
     1261 aggagataat tactataaca gtgaagtatg tggtaaggct tttatttatc ctttaagact
     1321 ttctaaacat aagaaaattt gtacaggaga gaaaccctac aagtgtgaag tatgtggcaa
     1381 ggccttcaat gattcattag tactttctaa acatagggcg attcatacag gagaaaaact
     1441 gtacaagtgt gatgtatgtg gcaaggcctt ctattatcca tcaagactta acaatcatag
     1501 gaagattcat tcaggagaga aaccatacca gtgtgaagaa tgtggcaagg cgttttgttt
     1561 tccatcatca ctatctaaac acaagagaat tcacacagga gagaaaccat acaagtgtaa
     1621 agaatgtgac aaggccttcc gctctctgtc atcactttct aaacatagga gaattcatac
     1681 aggagagaaa ccctacaagt gtgaagtgtg tggcaaagcc ttccactacc catcgttact
     1741 ttctaaacac aaaataactc atacagaaga aaaaccctac aagtgtgaag tttgtggcca
     1801 ggggttccat gttccatcaa aactttctca tcacaagata attcatacag gagaaagccc
     1861 ctacaagtgt gaagtatgtg gcaaggcttt ctgcattcca ttattacttt ctaaacacaa
     1921 gataagtcat acaggagaga atcactctaa cagtcaacta tctaagaagg ccttcattta
     1981 tccttcacga ctttctaaac ataaaaagat tcataaaaga gtaaaaccat acaagtgtga
     2041 agtatgtgga aaggccttcc gctttccatc attactatta atacacaagg gaattcatac
     2101 tggagaaaaa ccctacaagt gtgaagaatg tgggaaggcc ttctattatc catcattact
     2161 ttctaaacac aagagagttc atacaggaga aaaaccatac cagtgtgaag tatgtggcaa
     2221 gggcttccat gtgtcatcat cactatctaa acacaggata attcatacag gagagaagcc
     2281 atacaagtgt gaagtatgtg agaaggcctt ccgcttttcg tcatcactat ctaaacacaa
     2341 gagaattcat acaggaaaga aaccctacaa gtgtgaagaa tgtggcaagg ccttccattt
     2401 tccatcgtta ctttctaaac ataagataag tcatactgga gaaaaaccct acaattgtga
     2461 cctatgtggc aaggccttct attatccatc attactctcc aaacacaaga tgattcatac
     2521 aggagaaaaa cctcacaagt gtgatatttg tggcaaggcc ttccattatc cttcaaagct
     2581 ttccaaccat aagaaaattc atacaggaga gaaaccatac aagtgtgaag tatgtggaaa
     2641 tgtcttctgt tttgcctcgt cactttctaa acacaagaga attcacacag gagagaatcc
     2701 atacaagtgt gatgtgtgtg gcaaagcctt ctattaccca tcattacttt gtcatcacaa
     2761 gataattcat acaggagaaa aaccctacaa gtgtgaagtt tgtggcaagg ccttccatta
     2821 tccatcatta ctttctaaac acaagataat tcatcaggaa agaaacccta caagtgtgaa
     2881 gtatgtggca aagccttcca ttatccatca cgactttcca aacataaaaa aattcatggg
     2941 gctggagaga tggctcagga gttaagggaa ctggctactc tttcagaggt cctgagttca
     3001 attcccagca accacatggt ggctcacaac catgtatgat ggaatctgtt tcctcttatg
     3061 ctatgtaggt tttcgtgcca atagagcact catatagata aaataaaaaa tcatacaaac
     3121 catattagtg tgaagtatgt ggcaattact tccaatgtcc agcattattt tctaacctca
     3181 agagaagtca ttcagagaaa ccctgcaagt atgaagtata tatcctggcc ttctgttgtc
     3241 cataattact ctctgaacac agaattcaca cagcagaaaa actttacaat tgttaagggc
     3301 aagtcaactc ctttagaatt tgtcagattc tactcatttc aaaccagaca tatatgagga
     3361 atgtggaaaa gcaatctcta caaatatata ccaatgttta cacaaattaa ctcacaatgt
     3421 ggtgacattt acaaatgcaa agaacacgtc caaatgctca acaaaaacat taggggtcat
     3481 caagaaatcc attctgccta gaaaccatac aaatctaaag aatgtggcaa atactttaga
     3541 agttccatgg catggtccca actcaggata attcctactg gagagaaaca ttacaattgg
     3601 ataatgtggc caaaactatt accagtctta tggtcttaag caacagtcaa gaatttctct
     3661 gtgagagaaa ccacacaagt ctgaagaaca ttccaaggtc tttttttact tactaagaac
     3721 ttgtgaaaaa cctcataatt ccacctaata attccacatg tgaaaaatgt tgcaaaccct
     3781 tgagtgaact ttcttatatt tctcaacaca agatagttca aactggagtg aaataataca
     3841 aatgttaata tgttagcaca tctacaaacc ctaaaagtta gcagcttcct gcttaataga
     3901 aaccatacaa gattgacaaa tgtgtttaat ggacaacaga agatctggtg attgtgcttg
     3961 gaagcataag ctggaaatgc tgcagtataa gaaaataccc tgataacaac tattcatcag
     4021 tctcctgctt cctgactgtg gatggaacat gactacctgc tttaagctcc tgtcgccttt
     4081 actttcttac atgtgtggtg gttggagtaa gaccccaagg gctcagagat ttgaatgctt
     4141 agtcatcagg caggagcact tctttaaaag gattaagcag tgtggcatca ttggagtaag
     4201 tgtatcactg ggggttgtat ttaagtgttc aaaagctcaa agccagtgtt tcccttttct
     4261 tcctgattgt ggatcaaaat gtaaaattct cagctacttc atcatatctg tctccaccat
     4321 gttccctagc atgctcccta caataatgat aatgttcaaa acttctgaaa ctgtaaacaa
     4381 gcccaataaa tgctttcttt ctaatagtta
//
