LOCUS       XM_008764314            4560 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102551309
            (LOC102551309), transcript variant X3, mRNA.
ACCESSION   XM_008764314
VERSION     XM_008764314.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008764314.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4560
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4560
                     /gene="LOC102551309"
                     /note="uncharacterized LOC102551309; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 long SRA read, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:102551309"
                     /db_xref="RGD:7658417"
     CDS             583..2835
                     /gene="LOC102551309"
                     /codon_start=1
                     /product="uncharacterized protein C1orf167 homolog isoform
                     X1"
                     /protein_id="XP_008762536.1"
                     /db_xref="GeneID:102551309"
                     /db_xref="RGD:7658417"
                     /translation="MPMGQVTTHSQDSVLCQKPYQVQSNLASPRPRLALALKDTAGRL
                     GDTGLWQQSNLQLPTGRSQGRTREPSVQQSNLCFRGTTSPHLQNSCLPPTGPSSHQKQ
                     TLQVADTFLSLPGGLAPLDGCTWPGPRSWCGSGSWAPRLVGEPLTLEDLSISAHSQSQ
                     ASSPSSCSTADWLLDSIQHLEPEATSLGNQISWEHPGLTQSGPHTRGNQSTPAQPWPS
                     HSRECISFLETLGVQARLSESPIYKPLSRETTLGTLAGVLSDSDQEVLPTRHLGTRER
                     GPRGFLCNKRHRGHFSVTLEAGSKETRLESTRVFSVQPGKAGREKTPQGQTGRDGERT
                     ASCLSNTAPAHSTLQDKAQSTVTLDSQAACWKLLSKSFRVWRYLSQRLQAVAKATAMR
                     HRQLIGESPRELRWAPWLQETRLEAAWGQHAKALLAWSFREWRCVTLQQKLEQAHTQA
                     APTFLAPRGSLSLERKAATDLAWRCRDKCFRAWLRFVQRGAQCRRHLAHRRVRTLRVC
                     LGRWVEMKLQGSDVTEVTQLALYWQKAGNEVLSSLVPGTSMVPGLETEAQVQQPYKGP
                     DLCSLWEMCQKLALYRALLLWRTRLYQHQQAVSSFQGMQKRVLQHILSQWHLRVWGPD
                     PPSSDMKARLPLEAQGSSPRWEAWLDCRTSGGALEKRSPQLEPLDCSSRSLGRPSCSL
                     SLDQSVGAVMGLCRQRLTHSWTVQESPGARPGTGASGPEPPALLLTEGAKDWAGTPGR
                     GEGQGSLVTL"
ORIGIN      
        1 agggctggac ttaattcggg agaggcaagg gagaccgccc atccttaaaa aaacagcccc
       61 ttctctgggc tgagcaacgg gccggtggcc tttccaagcc tcaatattct ttctagaacc
      121 agtaagctca atcttaagac tgaccgcggt gcagaatgcc tctaatggct gagctggtgt
      181 ttagcagtag ttcagtcact caacacgtgt ttaagcccca gccatgtggc aggctattct
      241 gtacgttgta tgcgtacgaa accatcatat cttcagtaga cacagtaatg gcacatgcca
      301 ggtggagctc atgcagggca cagaggaaag tgccctttct ctgttcctat gctgagaatc
      361 taagccaggg cctcaggtgt gcaggtcagt gctacaccct gagctacacc tcagcccaac
      421 ccatctaact gaatgcacag atgttccaaa acccatggaa ccaagacctg tcactggata
      481 taaggaaaat gtacccccaa agactgtggc tgttctgagg ccagagctga agagaccctg
      541 aagaaacctg gacatcagcc tgggattgga ggaggccaga ggatgcccat gggccaggtc
      601 accacacact cccaagactc agtgctatgc cagaagccct accaagtcca aagtaaccta
      661 gccagcccac gtccccgcct ggcccttgcc ctgaaggaca ctgctggccg actaggtgac
      721 acagggctct ggcaacagag taatctacag ctgccaacag ggaggtccca ggggaggacc
      781 cgagagcctt ctgtacagca gagtaacctg tgcttccgag ggaccactag ccctcatctg
      841 caaaacagct gcctgccacc aactggccca tcctcccacc agaagcagac actccaggtc
      901 gcagacacct tcttgagtct ccctgggggc ttggcacctc ttgatgggtg cacatggcct
      961 ggtcccaggt cctggtgtgg ctcagggagc tgggccccca ggcttgtggg ggaacctctc
     1021 accttggagg atctgtctat ctctgcccac agtcagtctc aggcttcatc cccttcctcc
     1081 tgcagtactg ccgactggct gctggactcc atccaacacc tagaacctga ggccaccagt
     1141 ttagggaacc agatatcctg ggagcaccca ggccttaccc agagtggacc ccacacccgt
     1201 ggtaaccagt caactcctgc ccaaccttgg cccagccact ctagggaatg tataagcttc
     1261 ctggagactc tgggggtcca agctagactc tctgagtccc ctatatataa gcccctgtca
     1321 cgtgagacca ctctgggaac actggctggg gttctctctg actcagacca ggaggttcta
     1381 cctacccggc accttgggac aagagagagg ggtccccgag gctttctatg taacaagagg
     1441 cacagagggc acttcagtgt cacccttgag gcgggcagca aagagaccag acttgaatct
     1501 acaagggtct tcagtgtcca gcctggcaaa gcaggaagag agaagacccc acagggacaa
     1561 acaggcaggg atggggagag gacggcctcc tgcctgtcaa atacagcccc ggctcacagc
     1621 actctgcagg ataaggctca aagcactgtg accctggact cccaggctgc ttgctggaag
     1681 ctgctgtcca aaagtttcag agtctggagg tacttgtcac agagactcca ggcagtggct
     1741 aaggccacag ctatgagaca taggcagctg attggagaga gccccagaga actgcgttgg
     1801 gccccatggc tccaggagac ccggctggag gcagcttggg gtcagcatgc gaaggctctt
     1861 ctagcctgga gcttccgaga gtggagatgt gtcactttgc agcagaaact ggagcaagct
     1921 catacccagg ctgcgccaac attccttgct cctaggggga gcctttcctt ggaaagaaaa
     1981 gcagccacag atcttgcctg gagatgcagg gacaagtgct ttagggcctg gctacggttc
     2041 gtgcaaagag gggcccagtg cagaagacat ctggcccacc gaagagtgag gaccttaagg
     2101 gtatgcctgg gacggtgggt ggagatgaag ctccagggct cagatgtgac ggaggtgact
     2161 cagttggccc tctactggca gaaggcaggg aacgaggttc tcagcagctt agtcccagga
     2221 acttccatgg tccctggcct ggagacagag gcccaggtcc aacagccata caaggggcca
     2281 gatctgtgct ccctgtggga aatgtgccag aagttggccc tgtaccgggc cctgctgctc
     2341 tggaggacac gactctacca acaccagcaa gctgtctcct cctttcaggg catgcagaag
     2401 cgggttctgc agcacatcct gagccagtgg cacttgaggg tctggggtcc agaccctccc
     2461 tcaagcgaca tgaaggccag gttacccctg gaggcacagg gcagtagccc aagatgggag
     2521 gcctggctgg actgcagaac ttcaggaggg gcgctggaga agcgctctcc tcagctggag
     2581 ccactggact gcagctcaag gagcctggga agacctagtt gctcactgag cctggatcag
     2641 agcgtcgggg ctgtgatggg tctgtgcagg cagcggctga cgcactcgtg gacagtgcag
     2701 gagagtccag gagcgaggcc agggactggt gcgagtggcc ctgagccacc agctctcctg
     2761 ctgacagagg gagccaagga ctgggcgggg acacctggga gaggagaagg ccagggttcc
     2821 ttagtgacac tctgagttcc agacccatct cagagcccag gattggatca tggagggtac
     2881 acccaggagc gggtctctgc tttctcatct ttgactgtgt ggatcttgaa caagccactt
     2941 aagcactctc agtctgtgct aggccattgt aaaccaggaa taagactgtg ctctctttac
     3001 aaagtgcctg tggggatcct gtcagacagt ccacagcaaa ctctgggccg gagcatcagc
     3061 acctccctcc tcttcgcctg tcacctttgc cttgcctggc ctccaggtgt tgctggccta
     3121 aggtcgagga agacagagtc ctggtgctct cagggccatg atgccaatag gcttgcggag
     3181 caagcagcct gggagaggag cctgtgtggg aaaagaaggg gttgaacccc cctagcttcc
     3241 cagattccta atcctttgtc ctcagtttga ccccagccaa gttgcagtca catctccagg
     3301 aggcgcccac cccttcctga gcaacaaata acaccaacat tttctgtaac taattaactt
     3361 cagttctggg gatagaatcc agcgctctgg tctaccaccg agccacacta cagcccctat
     3421 tacagttttg tcttaattaa ttagttaatt agtgggttgt gtgtgtgctg cagctctcgt
     3481 gtggaagtca gttctctcta tcacgtgcat gactccaggg gactaaactc agattgccag
     3541 gttatacttt taaaccacag acctttagca tttcatggtg tcaatggagc aagagggagt
     3601 cagatggctt aggggacccc tctgtctctc tctctcccaa cggactgccc agtgaggggg
     3661 tcacctaggg ctggagctac atctgaaagc tctgtggggg gctaggcacc cacttctaag
     3721 ttcctttgtg agggtcctgg taagtctcac cacagagcgt ctgcagaacc cacttattca
     3781 aggtgagtga ctgaagaggt ggtagagcat gtccaatcag aagctcctct ctctgtctct
     3841 ctctgtctct ctctctctgt ctctctctat ctctctctgt ctctatctct ctctctatct
     3901 ctttctctgt ctctctctct gtctctctct gtctctctct ctctgtctct ctctgtctct
     3961 ctgtctctct ctgtctctct ctctgtctcc tgtctctctg tgtctctctc tctgtctcct
     4021 gtctctctgt gtctctgtct ctgtctctgt ctctgtctct gtctctctct ttctctctcc
     4081 accagaagag gacacgagat cccagtgttg gctgtgaggt accatgtagt tgctgggatt
     4141 tgaactcagg acctgtggaa gagcacacag tgctcttaac cactgagcca tctctccagc
     4201 ccaaagctcc tgtctcttta caacctaatc ctgtattttt acttattgaa tcatcttgct
     4261 ggttcgttgg cagccatctt caatgtcctg tacgcccacc ggtcgcagca gtgagctgtt
     4321 aggcaggttt gaccgtctta ggcagctggt gtcctgccca ctggagacag ctgcttctct
     4381 agccccatac ttgtctgtta gggatgaacg gcaaatcttc tggttttaaa agggagatct
     4441 gggagctgga gagatggctt aggggttaag agcactggct gctcttctag aggtcctgag
     4501 ttcaaatccc agcaaccaca tggtggctca caaccatctg taatgggatc tgattacttt
//
