LOCUS       XM_008766467            1401 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phospholipid scramblase 1-like
            (LOC102551265), transcript variant X2, mRNA.
ACCESSION   XM_008766467
VERSION     XM_008766467.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008766467.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008766467.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1401
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1401
                     /gene="LOC102551265"
                     /note="phospholipid scramblase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102551265"
                     /db_xref="RGD:7575278"
     CDS             583..1284
                     /gene="LOC102551265"
                     /codon_start=1
                     /product="phospholipid scramblase 2 isoform X1"
                     /protein_id="XP_008764689.1"
                     /db_xref="GeneID:102551265"
                     /db_xref="RGD:7575278"
                     /translation="MDLSTTSYESPPGLEYLLQIDHILIHQQFEFVEAILGFETANQY
                     KIKDKLGQKVYYAIEDSNFLTRNCCGDNRPFSMRIIDNSGHEVITLQRPLRCDSCFCP
                     CCLQKMEVQAPPGVPIGYIIQTWHPCRPKFTVQNEEKQDVLKIIGPIITCSFGGNVDF
                     EIKSLDEAFVVGRISKHWSGFLKEILTDVDSFGIQFPLDLDVKIKAVMLGACFLIDFM
                     FFESSRGQRPKLRLW"
ORIGIN      
        1 agctgcttat gtctctgctt cctggactct tcctaatagg attgtgaaaa tacttgagta
       61 taagacggat gaaggtccag tcttctctca ctgacctcta aggaaaattc taaagtgaag
      121 attatcaggc cactattttg aagtcttcct gtgccctgga gatcactaag cagagatagg
      181 aatatttcaa cttggggaaa actgtcacag agtcaaagga aaaattgtct gccatctttg
      241 tttacagcca gcactctcaa aaagagtaga tattaaatcc catgtacttc attgatattg
      301 ctctaaaaaa tgtaacaatc acacagtgaa gttcatagat gcaagaattg aaatgccaat
      361 ttatagagta attccaaaac attggccatt cgattttact gtacagtaac aaattatttg
      421 gcttactcct attttgggaa cttctggaca ttctgactcc tcaggacctc agactgactg
      481 ctcagtcctt ccacccgcct atgcagatgc aagcccagcc ttctttatta tccaaagtca
      541 actagaatct aaccagccag gtggccctac tgtgtgaccc ccatggatct cagcactacc
      601 tcctatgaat caccacctgg attggaatat ttacttcaga tagatcatat tctgattcac
      661 cagcagtttg agtttgtgga agccatttta gggtttgaaa ctgctaacca atataaaatc
      721 aaggacaagc tgggacagaa ggtttactat gccatcgaag actctaattt cttaacacgt
      781 aattgctgtg gggacaatag acctttctcc atgaggatca ttgataactc aggtcatgaa
      841 gtcataactc tacaaagacc actaagatgt gattcttgtt tctgcccctg ctgcctccag
      901 aagatggaag tccaagctcc tcctggtgtg ccaatcggtt acattattca aacctggcac
      961 ccatgccggc caaagtttac agttcaaaat gaggagaaac aggacgttct aaaaattatt
     1021 ggtccaatca tcacttgcag ctttggagga aatgtagatt ttgagatcaa atctcttgat
     1081 gaagcattcg tggttggcag gatttccaaa cactggtctg gttttctgaa ggagatactg
     1141 acagatgtag acagttttgg gatccagttc cctttagacc ttgatgtaaa gataaaggct
     1201 gtgatgcttg gcgcctgttt cctcatagat ttcatgttct ttgaaagcag tagaggccag
     1261 agaccaaaac tacgattatg gtaatgaatc aatatgcatg tcctcagaga tgtgaagtag
     1321 aaacattcgt tgagactgaa acgaagcatg gtcatatctt tcattgaaat cacttgaatt
     1381 aaactaggat atgcaactcc a
//
