LOCUS       XM_039111337            1925 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 624-like
            (LOC102551014), transcript variant X1, mRNA.
ACCESSION   XM_039111337
VERSION     XM_039111337.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111337.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1925
                     /gene="LOC102551014"
                     /note="zinc finger protein 624-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 140 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102551014"
                     /db_xref="RGD:7623967"
     CDS             254..1690
                     /gene="LOC102551014"
                     /codon_start=1
                     /product="zinc finger protein 664-like isoform X1"
                     /protein_id="XP_038967265.1"
                     /db_xref="GeneID:102551014"
                     /db_xref="RGD:7623967"
                     /translation="MQGFLTFKDVAPEFTLEEWESLSFAQRTLYMDVILENYNNLLSV
                     ENHVICEKRGKVLDRDTECIVHEHVNIQEKFCKWEEISIVPLESTQSTPYKTNLRDPS
                     LQSSNLKRHKAWKTREVYKYKDCMQFSNECAIVGVNSRIHIENKEHKNKEFDKDFVHE
                     DKLALKQNINGKNLHQCSECEKCFTKTRDLHLHQRIHTGKKRYKCNKCDKSFARESYL
                     RHHQRIHTGEKPYKCSECDKCFTEKSSLRSHMRIHTGEKPYKCSECDKCFTEKGTLKR
                     HMRIHTGEKPYKCSECDKCFRLQSHLNIHQRIHTGEKPYKCSECEKYFTDKCNFRIHQ
                     RIHTGEKPYKCSECDKCFTEKGTLRFHQRIHTGEKPYKCGECDKCFGHKSHLSNHQRI
                     HTGEKPFKCSQCDKCFTQKGTVRSHMRIHTGEKPYKCSECDKCFRLQCHRSIHQRVHT
                     GDKRYKCNECDKCFGYKSSLRIHQRIHT"
ORIGIN      
        1 aagttccgcc cctcaaactt tctccgtgtc tttgctgtct ccctttcagg aagtcctggt
       61 gggagactcg tcccggagac ctagaggtac ctgaaaactt ccttaagctg cagttgcggt
      121 ggcggcttcc tagaacattc ataagctggt cctgtcaccc tgccaggtct ccatatgctc
      181 agaaaatctg cataactgta aatcgaaact aagagccctg gacggtaaag gccaaagaga
      241 cttctaacaa aggatgcagg gtttcttaac cttcaaggat gtggctccag agttcacact
      301 agaggaatgg gaaagtctca gttttgctca gcggacactg tacatggatg tgattttgga
      361 gaattacaac aatctactgt ctgtggaaaa tcatgtgata tgtgaaaaac gtgggaaggt
      421 cttggataga gacacagagt gcattgtcca tgagcatgtg aatatccaag agaagttttg
      481 taaatgggaa gaaattagca tagtgcctct tgaatccacc caaagtacac cttataaaac
      541 taatctccga gatccctccc ttcaatcctc aaacctgaaa agacataaag cgtggaaaac
      601 cagagaagtt tacaaatata aagactgtat gcagttttca aatgaatgtg ctatcgttgg
      661 tgtaaattcc agaatccaca tagagaacaa agaacacaaa aataaagaat ttgataagga
      721 ttttgtccat gaagataaac tggcactgaa acaaaacatt aatggtaaga accttcacca
      781 atgtagtgaa tgtgagaaat gctttaccaa aacaagggat cttcatttgc atcagagaat
      841 tcatacagga aagaaacgtt acaaatgtaa taaatgtgac aaatcctttg cccgagaatc
      901 ctatcttagg catcatcaga gaattcatac tggagagaaa ccttacaaat gcagtgaatg
      961 tgacaaatgc tttactgaaa aaagcagtct gagatcccat atgagaattc ataccggaga
     1021 gaaaccttac aaatgcagtg aatgtgacaa atgctttact gaaaaaggca ctctgaaaag
     1081 acatatgaga attcatacag gagagaaacc ttacaaatgc agtgaatgtg acaaatgctt
     1141 tcgcctacaa tcccatctta atattcatca gagaattcat actggagaga aaccttacaa
     1201 atgcagtgaa tgtgaaaaat actttactga caaatgtaat tttaggattc atcagagaat
     1261 tcatacagga gagaaacctt acaaatgcag tgaatgtgac aaatgcttta ctgaaaaagg
     1321 cactctgaga tttcatcaga gaatacatac aggagagaaa ccttacaaat gtggtgaatg
     1381 tgacaaatgc tttggccaca aatcccatct tagtaatcat cagagaattc atacaggaga
     1441 gaaacctttc aaatgcagtc aatgtgacaa atgctttact cagaaaggca ctgtgagaag
     1501 ccatatgaga attcatacag gagagaaacc ttataaatgc agtgaatgtg acaaatgttt
     1561 tcgcctacaa tgccatcgta gtattcacca gagagtacat acaggagata aacgttacaa
     1621 atgcaatgaa tgtgataaat gctttggcta caaaagtagt ctgagaattc atcagagaat
     1681 tcatacttga aagaaacaaa gatcaataga actgaaagct gatgctttga gaaaatcaac
     1741 aaattagata aacccttagc cagaataatc acagggcaca gagactgtgg ccgaattaac
     1801 aaatatcaga aatgaaaagg tagacataac aacagaatca gaggaatttc aaaaaatcac
     1861 cagatcctaa taaaaaagac tatattcaac aaaacttaaa aatcgggagg aagtggacaa
     1921 ttacc
//
