LOCUS       XM_039101464            1732 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 120-like
            (LOC102550729), transcript variant X1, mRNA.
ACCESSION   XM_039101464
VERSION     XM_039101464.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101464.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1732
                     /gene="LOC102550729"
                     /note="zinc finger protein 120-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     25 samples with support for all annotated introns"
                     /db_xref="GeneID:102550729"
                     /db_xref="RGD:7528461"
     CDS             428..1426
                     /gene="LOC102550729"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038957392.1"
                     /db_xref="GeneID:102550729"
                     /db_xref="RGD:7528461"
                     /translation="MDAVTYDDVYLNFTQEEWVLLDPSQKNLYKDVMLETYRNLSAIG
                     YYWEGHNIEDHCQSSRSHGRHERSHPGEKPSEYTHCGKALAYQSHPQRRERIHTGEKP
                     YEGIQYDEAFVHHSSLQIHKETHTEENSYECNQCGKIFARRCNLRTHKTIHTGKKPYK
                     CDQCGKAFARKSHLKTHGITHSGEKPYRCDHCGKAFAYHSYLQVHKRIHTGERPYKCD
                     QCGKAFGHSCHLQVHRRIHTGEKPYECNQCAKAFVGLSDLKKHERTHTGEKPYKCNEC
                     GRAFVCNSGLQMHKATHTGMKPYECKHCSKSFATHRHLYNHERTHTRACTLMSIWR"
ORIGIN      
        1 ctttgttccg tgcagctcct cctaaagcag cgcctctcag cggctctctg tttttagatt
       61 gagaactcca ctgcaagttg agtaacgagc tacgcgagca ggaggaagag cctactgagt
      121 gctgtaagag gaactcgggc tgaagtcaaa acttgatccg gaaaaggtcc gtccttgcac
      181 tggaagcctg ggtggagaac ctctacactg tgtcccttca gcaagctcta atcttaaggg
      241 tggtgctcat gtcactcaag attcactggc caatcaaagc cttgaggcgg acctggcagt
      301 cagaagagga ggcgggttct tctgggtgcc gtgcggcagg cttgaatggt ctgcttgaat
      361 gtgctgtgat ctctgtcctg cggctgaatg ctgtgaagtg tgccctggca agctctgaag
      421 ctgcgacatg gatgcagtga cctatgatga tgtgtatttg aacttcactc aagaagaatg
      481 ggttttgctg gatccttcac agaagaatct ctacaaagat gtgatgctgg agacctatag
      541 gaatctcagt gctataggct actattggga aggccataat attgaagatc attgtcaaag
      601 ttccagaagt catggaaggc atgaaaggag tcatcctgga gagaaaccct ctgaatacac
      661 tcattgtggt aaagctttgg catatcagag tcatcctcaa aggcgtgaaa gaattcatac
      721 tggagagaag ccctatgaag ggattcagta tgatgaagcc tttgtacatc acagtagtct
      781 ccaaatacat aaagaaacgc acactgaaga gaactcttat gaatgtaacc agtgtggtaa
      841 aatctttgca cgtcgttgta atcttcgaac acataaaaca atacacactg gaaagaaacc
      901 ctacaaatgc gatcagtgtg gtaaagcctt tgcacgaaaa agtcatctca aaacgcatgg
      961 aataacacat tctggagaga aaccttacag atgtgatcat tgtggtaaag cctttgcata
     1021 tcatagttat ctccaagtac ataaaagaat acatactgga gagagacctt acaaatgtga
     1081 tcagtgtggt aaagcctttg gacatagttg tcatctccaa gtacatagaa gaatacatac
     1141 tggagagaag ccctatgagt gtaatcagtg tgctaaagcc tttgtaggtc tgagtgatct
     1201 taaaaaacat gaaagaactc acactggaga gaagccttac aaatgtaatg aatgcggtag
     1261 agcctttgtg tgtaactctg gtctccaaat gcataaagca acacatactg gaatgaagcc
     1321 ttatgaatgt aagcactgta gtaaatcctt tgccactcat aggcaccttt acaatcatga
     1381 aagaactcat actagagcat gtacgttgat gtctatatgg aggtgagggc tggcacaagt
     1441 aaagccgagg cctataatcc gacagtgaga aagtggggct ggtacagagt tttggtaagt
     1501 ggggagagag gaaaaagaag ggaagaacca agatggaggg cagagaagga cgattcagat
     1561 ccatgtggcc ttaaatggcc ataggtagtt aagaatattt cttaagggat ttattatagg
     1621 tcaaattggt attatgtagt gggcagttta tatctttatc aattgtgagt ttattgtgtg
     1681 gatgtattgt ggattgagaa tttaacatat aaatttgatt actaaactgt aa
//
