LOCUS       XM_039103661            4923 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus rho GTPase-activating protein 20-like
            (LOC102550446), transcript variant X2, mRNA.
ACCESSION   XM_039103661
VERSION     XM_039103661.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4923
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4923
                     /gene="LOC102550446"
                     /note="rho GTPase-activating protein 20-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102550446"
                     /db_xref="RGD:7642297"
     CDS             2287..4791
                     /gene="LOC102550446"
                     /codon_start=1
                     /product="rho GTPase-activating protein 20-like isoform
                     X1"
                     /protein_id="XP_038959589.1"
                     /db_xref="GeneID:102550446"
                     /db_xref="RGD:7642297"
                     /translation="MGEIHRTLLCQGPVELTSGRKRKKRYLSLFDDVLVVSTNLTKKK
                     FKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFL
                     TRSINEAKKGIMKTFPLQIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIE
                     DYQLWFCPGHREAPRALQGHEYPYDIIMNNIQNNLSKSNSKIFTAFPPLPGLFMENQS
                     WDARGQFILKPRDSAGSQQQDAKKRRRKSCMTSCFHGGCVPHHDQECSEPRDDKRGKL
                     FGQDLSSISQDGKLPTIILEMLSRIKDKGPTTDGIFLLTPNGTLCKTIKERLDNGENV
                     DIHHQSVHVVAWILKEFLQSIKGSLLTSKLYDQWLAVPEKVNDKEKLAAVKSLLEKLP
                     KPNADLLRQLFRILHQIKTKSSVNHMSSFSLSLETALCILWLPSYRNKILTNDIAKKI
                     SLVTFMIDNSPELFGEDVVAVWYETSLYHPPGPKDPCSQNTPSSNGIMEETEHGLSSC
                     PGERTCTPDFDELPRSGAAASIPYEGLLASEKGEGNEYTTQPEPIQHSPTPETKKELG
                     NSSPNILKDVNVPAVILDMLSLIAEKGQCSDDIFRMQLEKSHWSLREKVNTGKHINLK
                     EESVLTVACVVKDFIQNIKGSLLSCDLYENWLSVPDEGPLLGKITAIQNILLMMPKPN
                     YVLLKQLIRVLQKIKAASTNHLDSFDLSVRIAPHVLWNPTYKILFGRDLSKKLSIIQI
                     MIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANT
                     KELEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD"
ORIGIN      
        1 atgcttgttt gttttgtctg aagaattaag tcttggctga ataattgatg gtgcaaaatt
       61 tattctctaa caatattcag tgttgaatat ttgtttccat aattgtccgt gttgagaata
      121 accattaaca tacgtgattg gtacagaata gcaaaacgat gtgtagggcc gttccagaat
      181 gtgcttgaca tcctatcctc atccaaacca cagctcactt agcaattccc cctgaaattc
      241 aaatcagtaa ctggaacata aaggtttaaa tcatacattc taacatcatg caagtcatag
      301 atatactaat ttgatccttg tatgcaaaag tcaagaagaa aacattagaa gttctcattt
      361 ttcataacta tcaatttctg taaaagtagc aaacactgca cagtctaacc gcagctcata
      421 acacacaagt ggctcagatc tgagctggtg ttcctggtat tcactaatgt tacatccagg
      481 ctgtggagca tgcagtgcaa gtgtgcatgc cgtgtgttct gaactagacc tgtagggaag
      541 atgtgataca cacgttagca ttgccacata ccccattaac tgtgcatgaa ttagtctaag
      601 gtcactgctt tcagtaacct tccactgttt ttaaattatt tacaacacat tgtactcaat
      661 tatataagcc agatgtggtc tcacctgcaa tataacaatt tggtccacag ggctgtactt
      721 gggctggacc tggctgcccc tgatgcatcc ctaccagtgt tctggttgct ggtttaacca
      781 tacaagggac tgttgcacga gcctttcttt ttgcctggat attaaaccaa ttagacaccc
      841 cactgcaaca ttttgctttt tctaatgttg aaaagactgg tgaaaggaaa gataattagc
      901 ttcattttta aaaatttgtt ttacagaatt ctgtctccat ttttatcaca cacttgctaa
      961 gttttcacaa tctgaaaatt ctcaacacat ttgcatattt tacaaatcat cattgtttta
     1021 cttccggtcc aaatcaacat atgctttgaa gccaatagtg ctggttaagc ttcttgcctg
     1081 ccatatgctc ttctttttag aattaactgg ggcacttggg tatgcctggg tatcagcaga
     1141 agtaaatcca aatgactgac tcttttaaac aggttcactg actgtctacc aggaattgtt
     1201 ttagaccttt gaaatacatc ttcgaacaaa ataaacaagt gcctttcatc agtggacctt
     1261 atgttgtgat tgagataaat gatgcgaaag aatggagctt tagattacag taatattgaa
     1321 atcagttaaa cagtgtaaca agaatggcat agcaggagac tgagcatata cagtaacttg
     1381 gaacacgcta gattactttc catactttgc aaatgagatg gcttagctga atagaagctt
     1441 gttgtgatct tgagttacag ccacaaggga gaactgactc ccacaagttg tcctctgacc
     1501 tcatgtttgc tatggcatgt gtgtgtccac acacgtgcac aatatataaa taatttgaat
     1561 taaatataat ttgatactga tttaaatttg tcagctacta ctgaggtatg tttattctgt
     1621 tttaaacagt ttgaaaacag agaactaaag aacagaaaaa aaaccctagc aagaatattc
     1681 cccagagaag gtgaaaagca gtagaacaac tcagtttgat gtaggagtca gttttcagac
     1741 aaaagtgtat ggcagaagat ttgagtttcc tgtcaagagg caccgcggca ggcagtgtct
     1801 ggataggagt gttcctactg agtagatgct atactgtgtt gggatctatg agaactgctt
     1861 gctcacagtt tcagtttgaa cacaacgttg attccatttt gattcccaaa catgctttat
     1921 cttttttttt tttttttggc caagccatgg ttgacatcta tgtagatgaa gaaaagaata
     1981 cttcaaacca accaacctca tgtattactc aataataaaa tctaaaggaa tatttaggag
     2041 tgacatcctc agatacaaca tgctctttaa tatgccaaag ccacctcaac actctgctgc
     2101 catatgttct ccaccattat ggactctcct tctggaaaaa ggaggtgttc ttttcacact
     2161 gatggaaatt tgccaagtaa aaaggtgctg gaaccatgca aaattttctc aatggaagac
     2221 attggagacc tgtatcagga gtacggttag tttttattct atgtggaaac ccttgtgaag
     2281 gaagacatgg gggaaataca tcgaaccttg ctctgtcaag gccctgtgga actcacaagt
     2341 ggcaggaaaa ggaaaaaaag atatctctcc ttatttgatg atgttttggt tgtgtctact
     2401 aacctgacta agaaaaagtt taagataaaa tgtatcatcc cactgaatta tctgtgggtg
     2461 gtggatgatg tggaacttgt cagggcaaat caaacctgta cttgcaagac catcttcttc
     2521 tactgggcca ctgggaatgc tttggccacc tttcggtcaa aagaacagaa agtgcaatgg
     2581 tatactttcc tcaccagatc tatcaatgaa gccaagaagg ggatcatgaa aactttccca
     2641 ctgcagatat tccctgagga tatccaaacc tgtgacagtt ctttatgtgt aacagcaaca
     2701 aacatggata ctgtgaatga tataatggag aagttactac caatgataag agtgcataac
     2761 attgaagatt accaactttg gttttgtcct ggccacaggg aagctccaag agcactgcaa
     2821 ggccacgagt atccatatga cattataatg aacaacattc aaaataacct cagtaaatcg
     2881 aactcaaaaa ttttcacggc tttccccccc ttgcctgggc tgtttatgga aaaccaaagc
     2941 tgggatgcaa gagggcagtt catattaaag cccagagact cagctggaag ccagcagcaa
     3001 gatgcaaaga aaagacgtag aaaatcttgt atgacatcat gtttccatgg gggctgtgtg
     3061 ccgcaccatg accaagaatg cagtgaacca agagatgata agagaggaaa actttttggg
     3121 caagatttga gctccattag tcaggatggc aaactgccca ccataattct ggaaatgctg
     3181 tccagaataa aagataaagg acctacaaca gatggtatat ttttattaac tcccaatgga
     3241 acattatgca aaactataaa ggagaggttg gacaatgggg aaaatgtgga tatacatcat
     3301 caatcggtgc atgtggtagc ctggatctta aaggagtttc ttcaatctat caaaggaagt
     3361 ttactgactt ccaaattata cgaccagtgg cttgctgtac ccgagaaggt gaatgacaaa
     3421 gagaaattag cagcagtgaa gagtcttcta gaaaaacttc caaaacctaa tgctgatctt
     3481 ctcagacaac tgtttagaat actacatcaa ataaaaacaa agtcttctgt taatcatatg
     3541 tcatcattca gtctgtctct tgagacagcc ctatgtattt tatggcttcc tagctacaga
     3601 aataaaatat tgacaaatga tatcgctaaa aagatttctc tggtaacatt tatgatcgac
     3661 aattctccag aactgtttgg agaggacgtt gtggcagttt ggtatgaaac atcgctgtac
     3721 catcctcccg gaccaaagga cccatgttcc cagaatactc catctagcaa tgggatcatg
     3781 gaggaaacgg aacatggact cagcagctgc cccggtgaga ggacatgcac ccctgatttt
     3841 gatgaactgc cgagaagtgg tgcagctgct tcaattccat atgagggcct tctagcctca
     3901 gagaaaggtg aaggaaatga gtacacaact caaccagaac ctatccaaca ttcaccaaca
     3961 ccagaaacca aaaaagaatt ggggaattct tcccccaata ttctcaaaga cgttaatgtg
     4021 cctgctgtga tacttgatat gttgtcctta attgcggaaa aaggacaatg ttcagatgac
     4081 atattcagaa tgcaattgga aaaatcacac tggtccctta gggaaaaggt taacaccgga
     4141 aaacatatta acttgaaaga ggaatccgtg cttactgtcg cttgtgtagt aaaggacttt
     4201 atccaaaata tcaaaggaag tttactttct tgtgatttat atgaaaattg gcttagcgta
     4261 ccagatgaag gacctctcct tggaaaaatt acagccatcc aaaatatcct tttgatgatg
     4321 ccaaagccaa actacgtttt gcttaagcaa ctcatccgtg ttctacaaaa aattaaagcc
     4381 gcttctacga accatttaga cagctttgac ttgtctgttc gcatagcacc tcatgtttta
     4441 tggaatccga cttacaagat cttatttggg agggatctct caaagaagtt gtccattata
     4501 caaatcatga ttgacaactg tcaagaatta tttggagaaa atgataatat attttgtgaa
     4561 gataatcaga agtcttatga catcaaccta tcttctgata cattaaatac ttctggcaaa
     4621 gcaactctta tgattgaaac catagatgac cacgatgtga agacctcaaa ggctaatact
     4681 aaagaattag agatgtcgtc tgctgttcct catgagggag gtcctacagc aggccacaac
     4741 ggaacaactt caaaatataa tgttccacaa gagaaaattc ttcatgactg aagaagtttc
     4801 cggtcattgt atttcaatgt tctcttctac ctcccactaa ccatagcgga agagattatt
     4861 acaagaaaca acttcagttt tatatttaac catattgttt gctataattg ttttactcac
     4921 tat
//
