LOCUS       XM_008770644            1179 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102550375
            (LOC102550375), transcript variant X1, mRNA.
ACCESSION   XM_008770644
VERSION     XM_008770644.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008770644.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008770644.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1179
                     /gene="LOC102550375"
                     /note="uncharacterized LOC102550375; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     2 Proteins, and 63% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102550375"
                     /db_xref="RGD:7634115"
     CDS             1..885
                     /gene="LOC102550375"
                     /codon_start=1
                     /product="putative uncharacterized protein C3orf49
                     homolog"
                     /protein_id="XP_008768866.1"
                     /db_xref="GeneID:102550375"
                     /db_xref="RGD:7634115"
                     /translation="MERPQFCRPELLKLAYRKIGQYQRIQQPKRKSGSFKGKGIERWQ
                     RAVSSHLAKQNVLVPKEESLNESDVGFHEGRSNRKRNLVKKMKSAVGKMLSCKCGSQS
                     ANAGRESFVEQKGAVPSNTQGLLPRLVKELPSPRLFTKPRMRKLSQTATIQLDVVEAE
                     TEEVTGGNGLLRAKRTTKRLSVTSLPSGLQKAPYSSKKRPHFPALKKKQSMQAILRKS
                     ELTVGELQMQVDDLIETVTDKSMKLLEQRHAELKQCESLGAEILQSSKQFQRLSKRTT
                     RKYKLRSACFPCTCCCCC"
ORIGIN      
        1 atggagcgcc ctcagttttg tcgaccagaa ctcctaaagc ttgcctatcg gaagattggc
       61 cagtaccaga gaattcagca acccaaaagg aaaagtggct cattcaaagg gaaggggata
      121 gagagatggc aaagagctgt gtctagccac ttagccaagc agaacgtgtt ggtccccaaa
      181 gaggaatcac tgaatgaaag tgatgtgggg tttcatgaag gcagaagcaa ccgaaagaga
      241 aatctggtga agaagatgaa gagcgctgtt gggaaaatgc tgtcttgcaa atgtggaagc
      301 cagtcagcca atgctggcag ggagagcttt gtggagcaga agggagcagt cccttccaac
      361 acacagggcc tgctgcctag acttgtgaag gaacttccat ctcccaggtt atttaccaag
      421 ccgaggatga ggaagctctc acagactgca actatacagc ttgatgttgt agaagcagag
      481 acagaagagg tgactggagg aaatgggctt ctccgagcca agagaaccac caagagatta
      541 tctgtgacgt cacttccttc agggctgcag aaggcaccat actcatcaaa aaagagacca
      601 cacttcccag cactaaagaa gaagcagagc atgcaagcca tcctccggaa atcagagctg
      661 actgtaggcg agctgcaaat gcaggtggac gacctcatag aaacagtgac tgacaaatcc
      721 atgaagcttt tggaacaaag acacgctgag cttaagcagt gtgagtctct aggagctgag
      781 atccttcagt cttccaagca gttccaaagg ctttccaaga gaaccacgag gaagtataag
      841 ctgcgaagcg catgctttcc ctgcacctgc tgctgctgct gctgagttcc tagtacacag
      901 cccagccaca aagaggaccc tgcctcagac acacagggtg gaccagcagc agccggagtc
      961 atctgaatct aaccccatgc tacagcaggt gcagtccctc acacgtaaac acatgcactc
     1021 tgcacgcatg ccccaaagta ggtattttaa aaaagattcc ccaagaacaa aacacagaag
     1081 agaagcattt accaaccatg ttccttaaat actaacagag agaaatgcag aaaagcaatg
     1141 cagatgaact gatctcatac aacaatacaa tttttttaa
//
