LOCUS       XM_008762408            1020 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102550306
            (LOC102550306), transcript variant X2, mRNA.
ACCESSION   XM_008762408
VERSION     XM_008762408.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008762408.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008762408.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1020
                     /gene="LOC102550306"
                     /note="uncharacterized LOC102550306; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102550306"
                     /db_xref="RGD:7514905"
     CDS             249..941
                     /gene="LOC102550306"
                     /codon_start=1
                     /product="uncharacterized protein C20orf173 homolog
                     isoform X1"
                     /protein_id="XP_008760630.1"
                     /db_xref="GeneID:102550306"
                     /db_xref="RGD:7514905"
                     /translation="MEHCWVVVLGLVLWLMPPCLDLTHELGPQQEWTYVVPHQCYWLC
                     FKFGECGCHSKTPNCSTCHHTAGEACYQKTMGDLRTKALWWLGVNSVSEHETVWTKPS
                     EVTPNPLLHHFDFHCVSCAMLGNSGLSNINQLFYMAFRMNQASRHSSEAGMRNQITGP
                     FICPRNASHQGSWGQHWLLQLADLVPQVTRFWKTSDSLEVQDSKDEGSGALFSSSSRN
                     SLSLDDERGNLG"
ORIGIN      
        1 gcctgcgaac attgtcacgc cccctggcgc agattgggcg gtgctccaaa gggggtgggc
       61 cgggagcaca gagggcggtg cttgagtgcg gagtgacagc acctgtggga gaacctcagg
      121 acaaaacctg tgctgtgtcc gtgctaacac cttcaccagg ctcagtcagg atcctccctg
      181 gggcctgtgt tctttcaggt ggagaagcca gtctgttgcc taccacatga gccatcgtct
      241 gggcagacat ggaacactgc tgggtcgtcg tcttggggct tgtcttgtgg ctgatgcctc
      301 cctgcctgga tctgacacat gaactgggac cccagcagga atggacatac gtggtaccac
      361 accaatgtta ctggttgtgc ttcaaatttg gggagtgtgg ctgccattca aaaaccccca
      421 actgctccac ctgccaccac acagctggag aagcatgtta ccagaagacc atgggggact
      481 tgaggacaaa agctctctgg tggttgggcg tgaactcagt gagtgagcat gagacagtgt
      541 ggacgaagcc atcagaagtg actcccaatc ccctcctgca ccattttgat ttccactgtg
      601 tgtcctgtgc catgttgggg aattctggcc tcagcaatat caaccaatta ttctacatgg
      661 ctttcaggat gaatcaggcc tccagacaca gctccgaggc agggatgagg aaccaaatca
      721 caggaccctt catctgtccc aggaatgcca gtcaccaggg ttcctggggg cagcactggt
      781 tactgcagct tgcagatctg gtaccccaag tgacgagatt ttggaagacg tctgattccc
      841 tagaggtaca agatagtaaa gatgagggaa gtggagctct gttctcttcc agctctagaa
      901 acagcctgtc actagatgat gaaagaggga acttgggcta agggacagga ttcagcctgc
      961 tgacatgcac atcctcgctc atatgctagg ccgccctctc tggaattgga tcagaacatc
//
