LOCUS       XM_039103827            1449 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102550297
            (LOC102550297), transcript variant X1, mRNA.
ACCESSION   XM_039103827
VERSION     XM_039103827.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103827.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1449
                     /gene="LOC102550297"
                     /note="uncharacterized LOC102550297; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102550297"
                     /db_xref="RGD:7525227"
     CDS             245..628
                     /gene="LOC102550297"
                     /codon_start=1
                     /product="glutathione S-transferase Mu 6-like isoform X1"
                     /protein_id="XP_038959755.1"
                     /db_xref="GeneID:102550297"
                     /db_xref="RGD:7525227"
                     /translation="MSWASGLEAISSWLTPSGCSWNTQKQAKQRRDTPWATLPYLIDG
                     SHKITQSNAILRYLGRKHNLCGETEEERIRVDTLENQVMDTRIHLMIVCRSPDFVSGQ
                     WVEQTGVCRKSLKLMLIVTLALFSI"
ORIGIN      
        1 aggttctcac agtccaggtg tgaaaattga gcccagcaat gaaaggaaag agaatgggcc
       61 tcgttctctg cctctctggc cagtctccag ggtgcactgc caacttcctg aggacccagc
      121 agagggaggg gctgtaggct gagagccact ggagcaggcc tgccaatcac tgcctttggt
      181 atctgaatat tcaaacctgc tccaagagac cttcgagttt ggactggacc tcaccactgt
      241 ccggatgagt tgggcttcag gccttgaggc catctctagc tggctcacgc catccggctg
      301 ctcctggaat acacagaaac aagctaagca gagaagagat acgccatggg cgactctgcc
      361 ctacttaatc gatgggtcac acaagatcac ccagagcaat gccatcctgc gctaccttgg
      421 ccggaagcac aacctgtgtg gggagacaga ggaggagagg attcgtgtgg acactttgga
      481 gaaccaggtc atggacaccc gcatacatct catgatagtt tgccgcagtc ctgactttgt
      541 gagtggccag tgggtggagc agacaggggt ttgcaggaag agtttaaagc ttatgttaat
      601 agtcacgctt gctctattta gtatttgaac ttacccattc tgattctcca agctttccat
      661 ttcagccagc acactcaccc aattcttatt aataaacatc attttacatg atgaacacaa
      721 atcctaacca ccaaatctta ttaataaaca ctttatatca atgcctagaa atctttggta
      781 ttgttgtgac agccatgact gggcatttgg ttccaatata ataagctaat acactcagaa
      841 ctctctccag ttttggaatg gaccatctta cctagttggt gcctgttcct tgagtaccca
      901 gattcaaacc agaagaaaat aaaataagcc taatgtattg tgaaatccag ccaacagctt
      961 tctcagagca gagtccctgg tagaagaaag tatcagggtc tcttcctgat tggcagctca
     1021 cggtcagcct gagaaccttt gtccactcag acatcaaaca tggtacaact ttgctcatgc
     1081 tgctcaaata tttgattgac cctgctctgt gtcattcctc agaataactc tgtctcttgt
     1141 taactccttt gcttctccag ttccactgga ctttcaggtg aagaacttag gagtgaccca
     1201 aaagtagtcc tggtttggat gtcagtggtg acagattcag ggacaagcat tctcatccaa
     1261 ccccccatca cctctgagtc cactctgcta cagagccgga ctgtggttaa tacaacagga
     1321 acgcattaca tagaaacctg tgtactgtcg caggcccagt atagaaagga ggctactctt
     1381 ctgcacaacc ctatgacccc agcctttctc tagaacacct gtgtctgtgg gttgtggcaa
     1441 gtgttttct
//
