LOCUS       XM_039103323             273 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus small proline-rich protein 2H-like
            (LOC102550257), transcript variant X1, mRNA.
ACCESSION   XM_039103323
VERSION     XM_039103323.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103323.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..273
                     /gene="LOC102550257"
                     /note="small proline-rich protein 2H-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 55% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102550257"
                     /db_xref="RGD:7496120"
     CDS             1..273
                     /gene="LOC102550257"
                     /codon_start=1
                     /product="small proline-rich protein 2D isoform X1"
                     /protein_id="XP_038959251.1"
                     /db_xref="GeneID:102550257"
                     /db_xref="RGD:7496120"
                     /translation="MSYQEQQCKQPCQPPPVCPSQKCPEPCPPPKCPEPCPPPKCPEP
                     CPPQKCPEPCPPPKCPEPCAPQPCQQKCPPVQTPPPCQQKCPPKSK"
ORIGIN      
        1 atgtcttacc aagaacagca atgtaagcag ccttgccagc ctcctcctgt gtgcccatcc
       61 cagaagtgtc ctgagccctg tcctcctcca aagtgcccag agccttgtcc tcctccaaag
      121 tgcccagaac cttgtcctcc ccaaaagtgc ccagagccat gtcctcctcc aaagtgccct
      181 gaaccgtgcg ctcctcagcc atgccagcag aaatgccctc ctgtccaaac tcctccacca
      241 tgccagcaga aatgcccacc caaaagcaag tga
//
