LOCUS       XM_006230146            2100 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102549940
            (LOC102549940), transcript variant X3, mRNA.
ACCESSION   XM_006230146
VERSION     XM_006230146.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006230146.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006230146.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2100
                     /gene="LOC102549940"
                     /note="uncharacterized LOC102549940; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 Protein, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102549940"
                     /db_xref="RGD:7544889"
     CDS             1317..2078
                     /gene="LOC102549940"
                     /codon_start=1
                     /product="uncharacterized protein LOC102549940"
                     /protein_id="XP_006230208.1"
                     /db_xref="GeneID:102549940"
                     /db_xref="RGD:7544889"
                     /translation="MMTTKNIFPASKSVTSNQLQVFSEAFNPTTKSSKTNKSKRSVQE
                     TKDPVRNLSKQLPENYDFVSESTNSYHLGLRPLTPRKLLAQELPTFAPIPKATKTCVP
                     KDSMAMPQLIDEAYESIKNDSPALYPLRNASTVSVTKAPSSEDFIQKTPSADTMMVPS
                     ADTTKTPSADTTKLPSADTVEVPSSLTSKRLSAMAMKPKTKTQDINQKQQDNEKSCFS
                     LDLMFVNPNQLTLGIQRVPIPEATEATVPGTQVMS"
ORIGIN      
        1 tggaagtgaa cgatgcctat gtttgcacat tgcttcagtc cactgtccac agatgaggac
       61 ttagtcaagt aagcccacct ccctgaaagg aaggccttgt aaaatggact caagagggta
      121 atgccagcct ctgcaagatg tctcagcaga cagagggcag cctgagtttg atctcctgaa
      181 ctcaaataaa agacagatgc aggaatgttt gtaatcctag cactctggca ggaggagagg
      241 cagagacaga agaaccatct ggaagcctgt ggatcagctc atcctagagt attcaccaaa
      301 gcagaaataa gagcgagcct gcctcagaca aggtgaaaat agaaagtaga agaccgactt
      361 ccacaagcta ccatctgacc tccacagtgt tctgtggcat tcatgcatca aaactctcat
      421 gcgcaatgtt aaccaatcga ttaatttgtt aaaacattgt caaggggctg gtgagatggc
      481 ccagcaagca cagggactgc tgttaagcct gagtttgatt actggtcttc atatcatgga
      541 aagagagaac aacttcctgc aagttgacct ctgacctcca ttcacatgtc atgaccatga
      601 cacacatata cacataatat aaaatgcaac aaaaatattt taaatgatat gtaactgtgc
      661 tgagagacct catgactgtg gagaaagtgg aaaacagata tgggagatgc tgcctagatt
      721 aatatagtat tcagggtcta cctagcacta ccccatgata gatattaggt aatcaagact
      781 caggggttaa agacaattga agaatacaca gcttgattaa agcagagcca ggtgggttag
      841 aacaaggtct cccagctccc tggttcttag agcccacagc tttgtagagc atgaggtaca
      901 tgctctacag tgtgaaatgg attcgtgagt gagtggacca tgtgcaatgg atccatgagt
      961 ggacccgtgt gcagtggctt aggtacgacc accctatgga ccccattgcc acaggtagtg
     1021 ctcagtggtg actgaatcac caggaagtca ctgcatgagt gcatgaagac ctcctccagc
     1081 catgtatctg atgtcacaga tgaggagggg atggctaatc agtaagccaa ggaaccttca
     1141 tatcatccac cttccccagt tgtggagacg ggaagctcag aagcaagtgt ccaggaatgg
     1201 ggtgtgacag cttctccagg gtgcctctgt actcctccat ctacctatga gccactgcct
     1261 cctgtactgc cctgacccag actgaagcca cccaacatac cacagggcat tctcccatga
     1321 tgacaaccaa gaacattttc ccagcctcaa agtcagtgac cagcaaccag ctccaggttt
     1381 tttcagaagc cttcaacccc accaccaaat cttctaagac caacaagtcc aagaggtctg
     1441 tccaagagac aaaggaccca gtcaggaatc tgtccaagca actcccagag aattatgact
     1501 ttgtttctga gtctacaaac tcctaccacc tgggcctgcg tccacttaca ccaaggaagc
     1561 ttttggccca agagctgccg acatttgccc ctatccctaa ggccacaaaa acctgtgtcc
     1621 ctaaggattc catggccatg cctcagctga tagatgaggc ctatgagtca ataaagaatg
     1681 acagcccagc cctgtaccct ctcaggaatg catccactgt gtcagtcacg aaggcaccct
     1741 cttcagaaga cttcattcag aagacaccct ctgcagatac catgatggta ccctctgcag
     1801 ataccacgaa gacaccctct gcagatacca cgaagttacc ctctgcagac actgtggagg
     1861 taccctcttc actgacctca aagagactct ctgcgatggc catgaagcca aagacaaaga
     1921 cccaagatat aaaccagaag cagcaagaca atgaaaaatc ttgtttctcc cttgacctga
     1981 tgtttgtcaa cccaaaccag ttaactctag gtatccaacg tgtccctatt ccagaggcca
     2041 cagaggccac agtcccaggg actcaggtta tgtcttgaac taccatacaa taaacaactg
//
