LOCUS       XM_006232811             548 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus late cornified envelope protein
            1E-like (LOC102549828), mRNA.
ACCESSION   XM_006232811
VERSION     XM_006232811.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006232811.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006232811.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..548
                     /gene="LOC102549828"
                     /note="late cornified envelope protein 1E-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 85% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102549828"
                     /db_xref="RGD:7738003"
     CDS             1..393
                     /gene="LOC102549828"
                     /codon_start=1
                     /product="late cornified envelope protein 1D-like"
                     /protein_id="XP_006232873.1"
                     /db_xref="GeneID:102549828"
                     /db_xref="RGD:7738003"
                     /translation="MSCQQSQQQCQPPAKCPPKCQTPKCPPKCPPKCPPKCPPVSSCC
                     SLGSGGCCSSGGCCGSSSGGCCSSGGGGCCLSHHRPHRSLRRHRHSSGCCSSGGNSGC
                     CGSSSGCCGSSGGSSGCCGSSQQSGDCC"
ORIGIN      
        1 atgtcctgcc agcagagcca gcagcagtgc cagccccctg ccaagtgccc tcctaagtgt
       61 caaaccccaa agtgccctcc aaaatgcccc ccaaagtgtc ctcccaagtg cccgcctgtg
      121 tcttcctgct gtagcctggg ttctgggggc tgctgcagct ctggtggctg ctgtggctcc
      181 agctctggtg gctgctgcag ctctggagga ggaggctgct gcctgagcca ccacagaccc
      241 cacagatctc tccgtcgcca tcgccacagc tctggatgtt gcagcagtgg tgggaacagt
      301 ggctgctgtg gcagcagcag tggctgctgt ggcagcagtg gtggcagcag tggctgctgt
      361 ggcagtagcc agcagtctgg agactgctgt tgacctgggt gtggaaaatt tcagtcaaat
      421 ggtgctggag aagcacaaac atccgcaatg tttgttgttg tctccccctg cctccctcct
      481 tgctctgccc tctgatgtcc tgaattctca tgaaaaatgt tctgtattct cctcagacaa
      541 tgtcaatc
//
