LOCUS       XM_039096287            4077 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 208-like
            (LOC102549249), transcript variant X1, mRNA.
ACCESSION   XM_039096287
VERSION     XM_039096287.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096287.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4077
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4077
                     /gene="LOC102549249"
                     /note="zinc finger protein 208-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     3 long SRA reads, 16 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     221 samples with support for all annotated introns"
                     /db_xref="GeneID:102549249"
                     /db_xref="RGD:7691376"
     CDS             1223..3592
                     /gene="LOC102549249"
                     /codon_start=1
                     /product="zinc finger protein 431 isoform X1"
                     /protein_id="XP_038952215.1"
                     /db_xref="GeneID:102549249"
                     /db_xref="RGD:7691376"
                     /translation="MIGLMCFDVGCRVSYGRAGNLLSRDMKTVTYEDVHVNFTREEWA
                     LLDPFQKKLYKDVMLETYRNLNAIGFNWEDQNIEEHCQRSRRQRRHERSQSAEIPSEY
                     THCGKPFALHAHSHPQRNEEIHSEKKPSEVIQCVEAIAPYTSLQIYKRTQARQKPYEC
                     SQCGKVFANHSKLKKHERLHTEKKHYKCHECDKAFSQPIRLQKHQRVHTGEKPYKCNE
                     CDKPFSRHSRLQKHQRVNTGEKRYKCHECDKAFSRCSSLQKHKRVHTGEKRYRCHECD
                     KAFSQPSILYRHKRVHTGEKPYKCRECDKAFSRPSGLQMHNRVHTGEKPYKCNECDKA
                     FSRPSNLQTHKRVHTGEKPYKCNECDKAFSRHSSLQKHNGVHTGEKPYKCNECDKAFS
                     EPSSLQMHKRVHTGEKPYKCNECDKAFSVHSNLQMHKSVHTGKKPYKCNECDKAFSRP
                     SSLQKHKRVHTGEKPYKCIECDKAFSQSSILYSHKRTHTGEKPYKCNECDKAFADHSS
                     LWKHKRVHTGEKPYKCNECDKAFSRPSNLQTHKRVHTGEKPYKCNECDKAFSDHSSLR
                     MHKRVHTGEKPYQCRECDKDFSGPSSLQKHKRVHTGEKPYKCIECDKAFSQPSILYSH
                     KRIHTGEKPYKCNECDKAFANHSRLRKHKRIHTGEKPYKCNECDKAFSEHSNLQTHKR
                     VHTGEKPYKCKECDKAFSDHSSLRTHKRVHTGEKPYQCRECDKDFSGPSGLQMHNRVH
                     TGEKPYKCNECDKTFSQHSSLWRHNRIHIREKPRNVMNVINPFQTTAAY"
ORIGIN      
        1 aggagagggg gaaaaggaga taacatttga aatgtaaata cataaaatat ctaagaaaat
       61 aaataaagta gaaacaaatg taaagaaaga agaatatgga caaagacctg aacttactgt
      121 gaactgttgt tgacactaat gcagctagtt caaattactc tagttacacg agttcagttc
      181 cctaaaacca aacagatggg cactctgagg gattgttatt atttgcaata ttcaagatgg
      241 gaaatctctt ctttaatctg gaggtattga ttgacaagaa aaaattagtc taggccatag
      301 cttgtggtgg gcgcttccat gtataaagga tattgaggtt ggtagttctt tctcttcttc
      361 ccctacactg gctagaaaga tcattttatt tttctggcat tagcatctcc ttctctttaa
      421 ttctggcata tggtaaagac gagctgagac acacagctac tgctgtattc ttcaaatttc
      481 ttccaataca gtttttgttt tactagttgg accacattct gcgagccatt cttatatatc
      541 cactccatgc acacatagac agatccactg tattagttct gtttatctgg aaaaccttta
      601 ctaacacaga tatgatgttt caccttccca ctgaggaaga tgtgcttcta acattagtgc
      661 tccgtagcgg tcggcatcca ttccctgctt ttatcccagg gttgtttgca gtctcacatg
      721 tagcagttga atattagctg caattttcct gatgtcagcg tccaatgaga gaaacaaata
      781 tcacactttg tgtcctaaag tctctcttta attgttacta tccttggaac ctatacttca
      841 ctctgctcca agctgaatac tgtaccttgc aagttatccc tcttgattga ggagcagcaa
      901 cagcagcaag agcaggaaga agaaactcct gctgagtgct ggaagtcaaa aaggtaggtt
      961 attggaagac acgctaaaga gatactgaaa taaaaatctt gcagctctga gaagggtaag
     1021 ctcctggact agaatcctgg gccaggaaac gctatgctgt gtgctttcag cgcactctaa
     1081 tcctacggga tgggttcacg tcactcaaga ttcactggcc aatcagggcc tccatgcagg
     1141 gcgtccacta gtagaagagg gttgtacttc ctggtgccct gtttccagca gcggatttac
     1201 cggagttgct tggcggtctt gaatgattgg cctgatgtgt tttgatgtcg gctgccgggt
     1261 gtcttatgga cgtgctggca atctactaag tcgggacatg aagacagtga cttatgagga
     1321 tgtgcatgtg aacttcacgc gggaagagtg ggctttgctg gatcccttcc agaagaagct
     1381 ctacaaagat gtcatgctgg agacctacag gaacctcaat gctataggct ttaattggga
     1441 agaccaaaat attgaggaac actgtcaaag atctagaaga cagagaaggc atgaaagaag
     1501 tcagagtgca gagattccct ccgaatatac tcactgtgga aaaccctttg ctttacatgc
     1561 tcacagtcat cctcaaagga atgaagagat tcattcagaa aagaagccct ctgaagttat
     1621 tcagtgtgtt gaagccattg ctccttacac aagtctccaa atatataaaa gaacacaagc
     1681 tagacagaaa ccttatgaat gtagtcaatg tggtaaagtt tttgcaaatc acagtaaact
     1741 taaaaagcat gaaagacttc atactgaaaa gaaacactac aaatgtcatg aatgtgataa
     1801 agctttttca caacccatta gactccagaa gcatcaaaga gttcacactg gagagaaacc
     1861 ctataaatgc aatgaatgtg ataaaccctt ttcacgacat agtagactcc agaagcatca
     1921 aagagttaat actggagaga aacgctacaa atgtcatgaa tgtgataaag ccttttcacg
     1981 atgcagtagc ctccagaagc ataaaagagt tcacactgga gagaaacgct acagatgtca
     2041 tgaatgtgat aaagcctttt cacaacccag tatactctat aggcataaaa gagttcacac
     2101 tggagagaaa ccctacaaat gtagggaatg tgataaagcg ttttcacgac ccagtggact
     2161 ccagatgcat aatagagttc atactggaga gaaaccctac aaatgcaatg aatgtgataa
     2221 agccttttca cgacccagta acctccagac gcataaaaga gttcatactg gagagaaacc
     2281 ctacaaatgt aatgaatgtg ataaagcctt ttcacgacac agtagcctcc agaagcataa
     2341 tggagttcac actggagaaa aaccctacaa atgtaatgaa tgtgataaag ccttttcaga
     2401 acccagtagc ctccagatgc ataaaagagt tcacactgga gagaaaccgt acaaatgtaa
     2461 tgaatgtgat aaagcctttt cagtacacag taacctccag atgcataaaa gtgttcatac
     2521 tggaaagaaa ccctacaaat gtaatgaatg tgataaagcc ttttcacgac ccagtagcct
     2581 ccagaagcat aaaagagttc acactggaga gaaaccctac aaatgtattg aatgtgataa
     2641 agccttttca caatccagta tactctacag ccataaaaga actcatacag gagagaaacc
     2701 ctacaaatgt aatgaatgtg ataaagcctt tgcagaccac agtagcctat ggaagcataa
     2761 aagagttcac actggagaga aaccctacaa atgtaatgaa tgtgataaag ccttttcacg
     2821 acccagtaac ctccagacgc ataaaagagt tcacactgga gagaaaccct acaaatgtaa
     2881 tgaatgtgat aaagcctttt cagaccacag tagcctccgg atgcataaaa gagttcacac
     2941 tggagagaaa ccgtaccaat gtagggaatg tgataaagac ttttcaggac ccagtagcct
     3001 ccaaaagcat aaaagagttc acactggaga gaaaccctac aaatgtattg aatgtgataa
     3061 agccttttca caacccagta tactctacag ccataaaaga attcatactg gagagaaacc
     3121 ctacaaatgt aatgaatgtg ataaagcctt tgcaaaccac agtaggctac ggaagcataa
     3181 aagaattcac actggagaga aaccctacaa atgtaatgaa tgtgataaag ccttttcaga
     3241 acacagtaac ctccagacgc ataaaagagt tcacactgga gagaaaccct acaaatgtaa
     3301 ggaatgtgat aaagcctttt cagaccacag tagcctcagg acgcataaaa gagttcacac
     3361 tggagagaaa ccctaccaat gcagggaatg tgataaagac ttttcaggac ccagtggact
     3421 ccagatgcat aatagagttc atactggaga gaaaccctac aaatgtaatg aatgtgataa
     3481 aaccttttca caacacagta gcctctggag gcataataga attcatatca gagagaaacc
     3541 cagaaatgta atgaatgtga taaatccttt tcagaccaca gcagcctact gaggcataaa
     3601 agaatccaca ctgaagacaa accctacaaa tgtagtgact gtggtgaagc cttttcacaa
     3661 cacaatagac tcctgatgca tagaaggatt catactggag agaaacccta caaatgtaag
     3721 gaatgtgata aagccttttc acaacacagt agactccaga tgcatagaag aattcataca
     3781 ggagcaaaac ccatcaaatg taatgaatgt gttaaaccct tttcacaaca aagtagtctc
     3841 tagacacaga gttcatactg gagagaaacc ctacaaacgt aagcaatgtg ataaagcctt
     3901 tcacaacact gtaatctcca aatacattaa aaaacacaca caggagagat accctccaaa
     3961 tgtaaccaat gtgacaaagc cttttcccaa cataatagtc tccaaataca tagaaaaata
     4021 catactggag agaaacccta caagttaaca atggtgataa aagttttcca atccaca
//
