LOCUS       XM_039106596             870 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 658-like
            (LOC102549189), mRNA.
ACCESSION   XM_039106596
VERSION     XM_039106596.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106596.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..870
                     /gene="LOC102549189"
                     /note="zinc finger protein 658-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins, and 23% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102549189"
                     /db_xref="RGD:7615043"
     CDS             1..870
                     /gene="LOC102549189"
                     /codon_start=1
                     /product="zinc finger protein 431-like"
                     /protein_id="XP_038962524.1"
                     /db_xref="GeneID:102549189"
                     /db_xref="RGD:7615043"
                     /translation="MAAKSYCTYYETDVLTYDDVHVNFTEEEWALLNPSQKSLYQGVM
                     LETCRNLSAIGYIWEDNTTEEYCKSSGRHGRYERSFTGKQTFDFILQCGKAFAQRSSL
                     KRHERTCNGEKRYKCNQCCKAFVQNHALQKHKRTHTGQKPYECHQCGKAFAQSSHLQI
                     HIRTHTGEKPYECNQCGKAFADSGNLQTHKRTHTGDKPYECNQCGKAFAQRSHLQRHI
                     RTHTGEKPYECNQCGKAFAESSHLQSHMRIHTGEKRHECNQGGKAFADSSTLQQHKRT
                     QTDITSIFNYMTE"
ORIGIN      
        1 atggctgcaa aatcttactg tacttactat gaaactgatg tcctgaccta tgatgatgtg
       61 catgtgaact tcactgagga agagtgggca ttgctgaatc cttctcagaa gagtctctac
      121 caaggtgtaa tgctggagac ctgtaggaat ctcagtgcta taggatacat ttgggaagac
      181 aatactactg aagaatattg taaaagttct ggaagacatg gaaggtatga aagaagtttt
      241 actggaaagc aaacctttga ttttattctt caatgtggta aagcctttgc acaaaggagt
      301 agtctcaaaa gacatgaaag gacatgtaat ggagaaaaac gttataaatg taatcaatgt
      361 tgtaaagcct ttgtccaaaa ccatgctctc caaaaacata aaaggaccca tacaggacag
      421 aaaccctatg aatgtcacca atgtggcaaa gcctttgcac agagcagtca tctccaaata
      481 catataagaa ctcatacagg agagaaaccc tatgaatgta accaatgtgg caaagccttt
      541 gcagacagcg ggaatctcca aacacataaa agaacacaca caggagataa accctatgaa
      601 tgtaaccaat gtgggaaagc ctttgcacaa aggagtcatc tccaaagaca tataagaact
      661 catacaggag agaaacccta tgaatgtaac caatgtggca aagcctttgc agaaagcagt
      721 catctccaaa gccatatgag aattcataca ggagagaaac gccatgaatg taaccaaggt
      781 ggcaaagcct ttgcagacag cagtactctc caacaacata aaagaactca aacagacatc
      841 acaagcatct tcaactacat gactgaatag
//
