LOCUS       XM_039080296            2746 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102549144
            (LOC102549144), transcript variant X2, mRNA.
ACCESSION   XM_039080296
VERSION     XM_039080296.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2746
                     /gene="LOC102549144"
                     /note="uncharacterized LOC102549144; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102549144"
                     /db_xref="RGD:7624935"
     CDS             640..1629
                     /gene="LOC102549144"
                     /codon_start=1
                     /product="uncharacterized protein LOC102549144"
                     /protein_id="XP_038936224.1"
                     /db_xref="GeneID:102549144"
                     /db_xref="RGD:7624935"
                     /translation="MPRDLWDGVGFGKALSPPPLPSSPPSSPPSFPGKGPAWMAYKQA
                     SARLPEGVPTSHKAHFLLPSPSPSGCSSSHSGFIIVLSPAPLLPGKRLQPGSLAAWQE
                     PAVSLWVPAWPLISIQSPCARVRPLRGLMPAKANLSPCIPQQGLPASWSVTPVLQWAA
                     PKQRRRSELAQHAGEGKDSMGWHKGKNNVEPFLQPVDTIITATLGKKRVRGRQLLWVS
                     ACPRRLLPSALASMQISGARSRGAPDWPFRVWKESRLSLTQFPDRRLRLGRKLLLPAS
                     QPRRESQTQTFTHIQTRAREPLRHSFSGGSRREKGREVGSSASPASSKQSWAG"
ORIGIN      
        1 acaagtcacc ttcccatgct ggctcctctg gagagaggat cctactggcc aaagtcacac
       61 atggtgacag attggcaatg gtgtggtctc aaagtccctg ggcttcccag ggtgctaagt
      121 caactcctgc ctggtgacta ctatttctgg ggatggagtg tgttctggcc ccaccctgat
      181 tgtaccccct caccttgctg tgcatctccc ccaagctgcc tgtgcacaga gctctgggtc
      241 ctggacacca ggcctgtgac cagctcgatt agtctaagag caccctctgc tgggtatcac
      301 ctgcacaagg tgggtgaatg cgggggaggg gggagacctg tgcctttgga tggactggca
      361 aatatctcca ctcccccatt tatccattcc tgtggatcct tgagagccac aagggaggcc
      421 ctccctagcc aataagcatc ttcaaacctt ttccagccat ctgtctccag gcctgggaca
      481 acttggtgtg ttctcctggg acccttcacc gctggcttct gtttgcacta gttgtgttaa
      541 ggtggggtgg ggccagagac acaaggttgg gaaatagatg ttttggggaa acgcagtgtg
      601 gggcgaggag gggaaaagac actcagaacc tgggcactca tgcccagaga cctctgggat
      661 ggagtcggat ttgggaaagc gctctcccca cccccactcc cctcctcacc cccctcctca
      721 cccccatcct tcccagggaa aggccctgcc tggatggcat ataagcaagc cagtgccagg
      781 ctgccagagg gggtgcccac ctcccacaag gcacacttcc ttctcccctc ccccagcccc
      841 agcggatgca gcagttcaca ctctggattt attattgttc tcagtcctgc ccccctcctc
      901 cctgggaagc gcctgcagcc tggcagccta gcagcctggc aggaacctgc tgtctccttg
      961 tgggtgccag catggcccct tatctccatt cagtctcctt gtgccagggt cagaccactc
     1021 aggggcttga tgccagccaa ggccaacctg agtccttgca tcccacagca agggttgccc
     1081 gccagctggt ctgtcacccc tgtcctccag tgggctgcac ccaagcaaag gaggaggtca
     1141 gagctagccc agcatgcggg ggagggcaag gactcgatgg ggtggcataa aggcaaaaat
     1201 aacgtggaac cattcctcca gccagttgac acaattatca ctgccacact agggaaaaag
     1261 agagtgaggg gaagacagct gctctgggtc tctgcctgcc ccaggcggct cctcccctct
     1321 gccctggcct caatgcagat ttcaggggca agatccagag gtgctcccga ctggcctttt
     1381 agggtctgga aggagtcacg gctatccctc acccagttcc cagaccggag gctgcggctt
     1441 ggcaggaagc tactgttacc tgcttctcaa cccagacgcg agtcccagac acagacattc
     1501 acacacattc agacgcgcgc gcgggagcca ctccgccaca gcttttctgg agggtcaagg
     1561 agagagaagg gaagggaggt gggctcctct gcctccccgg catcctctaa gcagagctgg
     1621 gctggctgat gcagctcctc gacctttcca gcctcactcc acacatcctt tcttggtacg
     1681 gtcagccctc ggcccctgcc tctgccagtt tccatcacgg gcttccttca ggtcccttac
     1741 ctcgccctgg cagctgggtc caggtactgt ctcctgtagt gggcagcacc cgatctctct
     1801 ggaccgtgga gctggctggc aagggtcacg tctggatgat gcactctccg tggcgcgcgc
     1861 gcgcgcgcgt gtgtgtgtgt gtgtgtgtgt gtgtgcagga ggcacctcag cccctcactc
     1921 actcactcac acacgccctc ctgctgacgt caggatgtgc tggagggagg gactgggatg
     1981 ggaatttgta ctcgtagctt aaagggacac taggctatct cttctctggc ccagacacca
     2041 cctcctgagc aaggcgagtg ctggttccag aaccctcagc ccaacagagc cagtgaccca
     2101 acctgggatc caattttggt ggtccgtttg tcattccagt ggccttgaac tgagcgacca
     2161 gggagtagcc aaggaggatt tcttgagctc cagagatgag ccagccttga gtgtcctgga
     2221 actccctctc tggaccaggc tggcctccaa ctcaaagatc agccttgctt ctgccatggg
     2281 aatgctggta ttaaaggtgt gcagcaccgt ggcctggcta aatttaaaaa tcttaaggca
     2341 gtggaaactc cagagcaaag caggaacttc tcatggagaa ggcaataaaa cgacctaata
     2401 accacgtgct gaacgtgagg aggcaataaa tgtttcagag aaccatgtgc acttgggcgg
     2461 ttcttggaag agtgaggaga cagcctgtca gcctctgctc attaacctaa ggaccatgtg
     2521 accagtgagg tggccatctt gtggtttggt ctgcattatt tgttggaaaa atgccacaag
     2581 aagatcacac tgggatatag aagtttctgg cgaatactta gccaggtagc cttttgtggc
     2641 cagattggtc tacaaagaga aacagcattt tggaaaagtg aaataccttt gtaacctaac
     2701 ctgcaattgg ttcaataaag acttcaaatt taaaaaaaaa aaaaaa
//
