LOCUS       NM_001409025             631 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Rattus norvegicus H2B clustered histone 3 (H2bc3), mRNA.
ACCESSION   NM_001409025 XM_006253978
VERSION     NM_001409025.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Todd,M.A. and Picketts,D.J.
  TITLE     PHF6 interacts with the nucleosome remodeling and deacetylation
            (NuRD) complex
  JOURNAL   J Proteome Res 11 (8), 4326-4337 (2012)
   PUBMED   22720776
REFERENCE   2  (bases 1 to 631)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   3  (bases 1 to 631)
  AUTHORS   Dejardin,J. and Kingston,R.E.
  TITLE     Purification of proteins associated with specific genomic Loci
  JOURNAL   Cell 136 (1), 175-186 (2009)
   PUBMED   19135898
REFERENCE   4  (bases 1 to 631)
  AUTHORS   Bonenfant,D., Coulot,M., Towbin,H., Schindler,P. and van Oostrum,J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jul 7, 2022 this sequence version replaced XM_006253978.4.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582419.1806796.1,
                                        SRR22582424.1332005.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-631               JAXUCZ010000017.1  41807913-41808543
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..631
                     /gene="H2bc3"
                     /note="H2B clustered histone 3"
                     /db_xref="GeneID:102549061"
                     /db_xref="RGD:7729692"
     exon            1..631
                     /gene="H2bc3"
                     /inference="alignment:Splign:2.1.0"
     CDS             42..422
                     /gene="H2bc3"
                     /note="histone H2B type 1-B"
                     /codon_start=1
                     /product="histone H2B type 1-N-like"
                     /protein_id="NP_001395954.1"
                     /db_xref="GeneID:102549061"
                     /db_xref="RGD:7729692"
                     /translation="MPEPSKSAPAPKKGSKKAISKAQKKDGKKRKRSRKESYSVYVYK
                     VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL
                     LPGELAKHAVSEGTKAVTKYTSSK"
ORIGIN      
        1 aatctttaac actgtagatt gtccataggt ttttgagaag aatgcctgag ccttcgaaat
       61 ctgcaccagc tcctaagaag ggctctaaga aagctatctc taaagctcag aaaaaggatg
      121 gcaagaagcg caagcgtagc cgcaaggaga gctattccgt gtacgtgtac aaggtgctga
      181 agcaagtgca cccggacacc ggcatctctt ccaaggccat gggcatcatg aactcgttcg
      241 tgaacgacat cttcgagcgc atcgcgggcg aggcgtcgcg cctggcgcat tacaacaagc
      301 gctcgaccat cacgtcccgg gagatccaga ccgccgtgcg cctgctgctg ccgggggagc
      361 tggccaagca cgcggtgtcg gaaggcacca aggcggtcac caagtacacc agctccaagt
      421 gagcgctcag agctcacaac agacccaaag gctcttttca gagccaccca catcatttct
      481 agaagagttc tgactgctta ctttgtcagc caagttgcct tcatgaaaga ccgagtgaaa
      541 ttgggctttt accccgagtt tagattaaag gctgaggcca cttagggttg ctgctgttag
      601 gtcttagtac tttccagttt gatagggttt t
//
