LOCUS       XM_039101136             511 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ubiquitin-like protein FUBI-like
            (LOC102548890), mRNA.
ACCESSION   XM_039101136
VERSION     XM_039101136.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101136.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..511
                     /gene="LOC102548890"
                     /note="ubiquitin-like protein FUBI-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102548890"
                     /db_xref="RGD:7667300"
     CDS             97..498
                     /gene="LOC102548890"
                     /codon_start=1
                     /product="ubiquitin-like protein FUBI"
                     /protein_id="XP_038957064.1"
                     /db_xref="GeneID:102548890"
                     /db_xref="RGD:7667300"
                     /translation="MQLFVRAQELHTLEVTSQETVTQIKAHVASLEGIAPEDQVVLLA
                     GSPLEDEATLGQCGVEALTTLEIAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKK
                     TGRAKRQMQYNQCFVNVVPTFGKKKGPNANS"
ORIGIN      
        1 ttgttttggg tctcctgaaa gtgttaataa taggtcttta cgctttttct tgactccatc
       61 ttcacggttg cagcagcagc atccacggta gccaaaatgc agctctttgt ccgtgcccag
      121 gaactacaca ccctcgaggt gaccagccag gagacggtca cccagatcaa agctcacgtg
      181 gcctcactag aaggcattgc cccggaagat caagtcgtgc ttctggcagg ctcgccactg
      241 gaggatgagg ccactctagg ccagtgtggt gtagaggccc tgaccactct ggagatagct
      301 ggccgcatgc tgggaggtaa agttcatggt tctctggctc gtgctgggaa agtaagaggt
      361 cagactccca aggtggccaa acaggaaaag aagaagaaga agactggtcg ggccaagagg
      421 caaatgcagt acaaccaatg ctttgtcaat gttgtgccca ccttcggcaa gaagaagggc
      481 cccaatgcta attcctaagt cctgttgtga t
//
