LOCUS       XM_039092872            1357 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102548772
            (LOC102548772), transcript variant X1, mRNA.
ACCESSION   XM_039092872
VERSION     XM_039092872.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092872.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1357
                     /gene="LOC102548772"
                     /note="uncharacterized LOC102548772; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 17 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:102548772"
                     /db_xref="RGD:7567433"
     CDS             506..985
                     /gene="LOC102548772"
                     /codon_start=1
                     /product="probable splicing factor, arginine/serine-rich
                     4"
                     /protein_id="XP_038948800.1"
                     /db_xref="GeneID:102548772"
                     /db_xref="RGD:7567433"
                     /translation="MPLYSSLNNRETKPGLSTRSKPLMIPRLLRSDQIQGRGPPGKQS
                     PCRWAAGPLSKHKRSRSLCPRACPRGRGCGAATALRFSREPPARDRFQRGKSRTPGPR
                     PHGNPRARTRARRAPGRRPPARRLGPRTPTPRRLTGPQPFAMYHRGTAGAGMLESHD"
ORIGIN      
        1 gtgacactgt ctgcaagtag aggaacggga ggaggcagcc gcagttcagc aacagaaggg
       61 ctcggccctt acctttcggg gttgagatct acgatgccca tcactaatac cttcttgcct
      121 ggtctcatgc cacctttaat gtgcccacaa aatggaacta tctgcaaagg aggaggggag
      181 agacaggaag tttacaggct gtgagagaag ccaagccctc ggccctgaga acctgaccca
      241 ccagaaggca aggaaatgca ccaggaggga gaaggataaa ggcagagaca cggagcacac
      301 tgatttacca gtcgtgggaa gtacacgtcg gcttgaaccg gagaacccag ggagttgttc
      361 aagtgcccat catcaagttt ctaaaaatag aagcacacag attggctttc cacagaccct
      421 tgtttattag ggagtgaata gaaggatgtg gaatccacac aaatcggtcg ggatccagca
      481 gccctccaca gacacatagg cagtgatgcc tctttatagc tcattaaata accgcgaaac
      541 aaaacccggc ctttccaccc ggtctaagcc tctgatgatc cccaggctct tgagatcgga
      601 tcaaattcaa ggtcgcggcc caccggggaa gcaaagcccg tgtaggtggg cggcaggccc
      661 cctctccaag cacaaacgct cccggagtct ctgcccccgg gcctgtcctc ggggacgtgg
      721 ctgcggtgca gcgacagcgc tccgtttctc ccgggagccc ccggcgcggg accgtttcca
      781 aagggggaaa tcccggacgc cggggccgcg gccccacggt aacccacgtg cacgcacacg
      841 cgcccggcgc gcacctggcc ggcgccctcc tgcccggcgc ctggggcccc gaactcccac
      901 cccgcggcgg ctgacaggac cccagccatt tgctatgtac cacagaggga cagcgggagc
      961 agggatgttg gaatctcacg actgatttga cttgagacct ccctcacgtt ggcccccaga
     1021 actgaagagc cttcttatac aaggactctg ctgggactgg agtctctgca gatctggaaa
     1081 atctacatca gggaaaggag acaggggtca aagggcagcc ctgcagatgg ctggagggtg
     1141 aatgagtgtg gctaggaaaa cttgctgcat tccacgggaa agtggggctg tgtaacccag
     1201 caactccgtt cctctttaat atcacacagc accatcctct atgccttttg tctctggctt
     1261 actttacgtt cttaaatatg aaaaaggacc ctagataact cctgtacgtg agccaagctg
     1321 gtcgatattt gaataaatgt aaaaaacagt aaactca
//
