LOCUS       XM_039097590            4188 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102548730
            (LOC102548730), mRNA.
ACCESSION   XM_039097590
VERSION     XM_039097590.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4188
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4188
                     /gene="LOC102548730"
                     /note="uncharacterized LOC102548730; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:102548730"
                     /db_xref="RGD:7676646"
     CDS             1..4005
                     /gene="LOC102548730"
                     /codon_start=1
                     /product="uncharacterized protein LOC102548730"
                     /protein_id="XP_038953518.1"
                     /db_xref="GeneID:102548730"
                     /db_xref="RGD:7676646"
                     /translation="MEEDVARVYPYSTQERCALVPSALASEDSNSEAVLAAQSPGITP
                     AVQWITIPREDSLQIQARSTHIPHKSAVPLYPLHLQVRIQILRQCWQPREDSLQIQAR
                     STLIPHKSAVPLYPLHLQVRIQILKQCWQPSHLASPLRSSGSLFPEDSLQIQARSTLI
                     PHKSAVPLYPLHLQVRIQILRQCWQPSHLASSLRSTGSLFPEDSLQIQARSTLIPHKS
                     AVPLYPLHLQVRIQILRQCWQPREDSLQIQARSTLLPHKSAVPLYPLHLQVRIQILRQ
                     CWQPSHLASPLRSSGSLFPEDSLQIQARSPLILHKSAVPLYPLHLQVRIQILRQCWQP
                     REDSLQIQARSTLIPHKSAVPLYPLHLQVRIQILKQCWQPSHLASPLRSSGSLFPEDS
                     LQIQARSTLIPHKSAVPLYPLHLQVRIQILRQCWQPSHLASPLRSSGSLFPEDSLQIQ
                     ARSTLIPHKSAVPLYPLHLQVRIQILRQCWQPSHLASPLRSSGSLFPEDSLQIQARST
                     LIPHKSAVPLYPLHLQVRIQILRQCWQPREDSLQIQARSTLIPHKSAVPLYPLHLQVR
                     IQILRQCWQPSHLASPLRSSGSLFPEDSLQIQARSTLIPHKSAVPLYPLHLQVRIQIL
                     RQCWQPSHLASLLGPVDHYSQSPGITPAVQWITIPREDSLQIQARSTLIPHKSAVPLY
                     PLHLQVRIQILRQCWQPSHLASPLRSSGSLFPEDSLQIQARSTLIPHKSAVPLYPLHL
                     QVRIQILRQCWQPSHLASPLRSSGSLFPEDSLQIQARSTLIPHKSAVPLYPLHLQVRI
                     QILRQCWQPSLQHQPCHHYPLCSDVLQSPGITPAVQWITIPREDSLQIKARSTLIPHK
                     SAVPLYPLHLQVRIQILKICWEPREDSLQIQARSPLIPHKSAVPLYPLHLQVRIQILR
                     QCWQPSHLASPQRSSGSLLPVTWHHPCGPVDQYSQRGQSSSSSYVSPYSTQERCALLS
                     SALASEDSNSEARLAAQRGQTLNSSLVSPYSTKERCALVSSALASEDSNSEAVLAAQS
                     PGITPAVQWITIPREDSLKIQARSPLIPHKRAVPLYPLHLQVKIQILRQCWQPRTTCG
                     IHLSSSDALVFFPLCVNLDNLSSPGIIPAFQWIIIPREDSLQIPSRSPLIPHKSAVPF
                     YPLHLQERIQILRKCCQPREDSLQIQARSPLIPHKSAVPLYPLHLQVRIQVLRHCWQP
                     SHLASPLRSSGSLILVIWHHPCIPVDHRTQSSGMTPAVQVITVLSIHLPALGTEFYVQ
                     VGLWRGMITPLQKQKRRHSPKIQAKVPLHPYKSFQPCSPLHLQVIIHNSETVLAAQKT
                     FLKDSRQGSHASLE"
ORIGIN      
        1 atggaagaag atgttgcaag agtctaccct tattccacac aagagcgctg tgcccttgta
       61 ccctctgcac ttgcaagtga ggattcaaat tctgaggcag tgttggcagc ccagtcacct
      121 ggcatcaccc ctgcggtcca gtggatcact attcccagag aggacagtct tcaaattcaa
      181 gctaggtcta cccatattcc acacaagagc gctgtgccct tgtaccctct gcacttgcaa
      241 gtgaggattc aaattctgag gcagtgttgg cagccaagag aggacagtct tcaaattcaa
      301 gctaggtcta cccttattcc acacaagagc gctgtgccct tgtaccctct gcacttgcaa
      361 gtgaggattc aaattctgaa gcagtgttgg cagcccagtc acctggcatc acccctgcgg
      421 tccagtggat cactattccc agaggacagt cttcaaattc aagctaggtc taccctcatt
      481 ccacacaaga gcgctgtgcc cttgtaccct ctgcacttgc aagtgaggat tcaaattctg
      541 aggcagtgtt ggcagcccag tcacctggca tcatcactgc ggtccactgg atcactattc
      601 ccagaggaca gtcttcaaat tcaagctagg tctaccctta ttccacacaa gagcgctgtg
      661 cccttgtacc ctctgcactt gcaagtgagg attcaaattc tgaggcagtg ttggcagcca
      721 agagaggaca gtcttcaaat tcaagctagg tctacccttc ttccacacaa gagcgctgtg
      781 cccttgtacc ctctgcactt gcaagtgagg attcaaattc tgaggcagtg ttggcagcct
      841 agtcacctgg catcacccct gcggtccagt ggatcactat tcccagagga cagtcttcaa
      901 attcaagcta ggtctcccct tattctacac aagagcgctg tgcccttgta tcctctgcac
      961 ttgcaagtaa ggattcaaat tctgaggcag tgttggcagc ccagagagga cagtcttcaa
     1021 attcaagcta ggtctaccct tattccacac aagagcgctg tgcccttgta ccctctgcac
     1081 ttgcaagtga ggattcaaat tctgaagcag tgttggcagc ccagtcacct ggcatcaccc
     1141 ctgcggtcca gtggatcact attcccagag gacagtcttc aaattcaagc taggtctacc
     1201 cttattccac acaagagcgc tgtgcccttg taccctctgc acttgcaagt gaggattcaa
     1261 attctgaggc agtgttggca gccaagtcac ctggcatcac ccctgcggtc cagtggatca
     1321 ctattcccag aggacagtct tcaaattcaa gctaggtcta cccttattcc acacaagagc
     1381 gctgtgccct tgtaccctct gcacttgcaa gtgaggattc aaattctgag gcagtgttgg
     1441 cagccaagtc acctggcatc acccctgcgg tccagtggat cactattccc agaggacagt
     1501 cttcaaattc aagctaggtc tacccttatt ccacacaaga gcgctgtgcc cttgtaccct
     1561 ctgcacttgc aagtgaggat tcaaattctg aggcagtgtt ggcagccaag agaggacagt
     1621 cttcaaattc aagctaggtc tacccttatt ccacacaaga gcgctgtgcc cttgtaccct
     1681 ctgcacttgc aagtgaggat tcaaattctg aggcagtgtt ggcagccaag tcacctggca
     1741 tcacccctgc ggtccagtgg atcactattc ccagaggaca gtcttcaaat tcaagctagg
     1801 tctaccctta ttccacacaa gagcgctgtg cccttgtacc ctctgcactt gcaagtgagg
     1861 attcaaattc tgaggcagtg ttggcagcca agtcacctgg catcactcct cggtccagtg
     1921 gatcactatt cccagtcacc tggcatcact cctgcggtcc agtggatcac tatacccaga
     1981 gaggacagtc ttcaaattca agctaggtct acccttattc cacacaagag cgctgtgccc
     2041 ttgtaccctc tgcacttgca agtgaggatt caaattctga ggcagtgttg gcagccaagt
     2101 cacctggcat cacccctgcg gtccagtgga tcactattcc cagaggacag tcttcaaatt
     2161 caagctaggt ctacccttat tccacacaag agcgctgtgc ccttgtaccc tctgcacttg
     2221 caagtgagga ttcaaattct gaggcagtgt tggcagccaa gtcacctggc atcacccctg
     2281 cggtccagtg gatcactatt cccagaggac agtcttcaaa ttcaagctag gtctaccctt
     2341 attccacaca agagcgctgt gcccttgtac cctctgcact tgcaagtgag gattcaaatt
     2401 ctgaggcagt gttggcagcc aagtctgcaa caccaaccct gtcatcatta ccctctctgc
     2461 tctgatgtct tgcagtcacc tggcatcacc cctgcggtcc agtggatcac tattcccaga
     2521 gaggacagtc ttcaaattaa agctaggtct acccttattc cacacaagag cgctgtgccc
     2581 ttgtaccctc tgcacttgca agtgaggatt caaattctga agatttgttg ggagcccaga
     2641 gaggacagtc ttcaaattca agctaggtct ccccttattc cacacaagag cgctgtgccc
     2701 ttgtaccctc tgcacttgca agtgaggatt caaattctga ggcagtgttg gcagcccagt
     2761 cacctggcat caccccagcg gtccagtgga tcactactcc cagtcacctg gcatcacccc
     2821 tgcggtccag tggatcagta ttcccagaga ggacagtctt caagttcaag ctacgtctcc
     2881 ccttattcca cacaagagcg ctgtgccctt ttatcctctg cacttgcaag tgaggattca
     2941 aattctgagg cacggttggc agcccagaga ggacagactt taaattcaag cttggtctct
     3001 ccttattcca caaaagagcg ctgtgccctt gtatcctctg cacttgcaag tgaggattca
     3061 aattctgagg cagtgttggc agcccagtca cctggcatca cccctgcggt ccagtggatc
     3121 actattccca gggaggacag tcttaaaatt caagctaggt ctccccttat tccacacaag
     3181 agagctgtgc ccttgtatcc tctgcacttg caagtgaaaa ttcaaattct gaggcagtgt
     3241 tggcagccca ggaccacttg cgggattcat ctgagctcct ctgatgccct tgtgtttttt
     3301 cccctctgtg ttaacctgga caatcttagt tcacctggca tcatccctgc tttccagtgg
     3361 atcattattc ccagagagga cagtcttcaa attccatcta ggtctcccct tattccacac
     3421 aagagcgctg tgccctttta tcctctacac ttgcaagaga ggatacaaat tctgaggaag
     3481 tgctgccagc ccagagagga cagtcttcaa attcaagcta ggtctcccct tattccacac
     3541 aagagcgctg tgcccttgta tcctctgcac ttgcaagtga ggattcaagt tctgaggcac
     3601 tgttggcagc ccagtcatct ggcatcaccc ctgcggtcca gtggatcact aatcctagtc
     3661 atctggcatc acccctgcat cccagtggat cacagaactc agtcatctgg catgacccct
     3721 gcagtgcagg tgatcacagt tctcagcatt cacttaccag cattgggcac tgagttttac
     3781 gtacaggttg gactttggag gggaatgatc actcccttgc agaaacaaaa gagaagacat
     3841 tctccaaaga ttcaagcaaa ggttcccttg catccctaca agagctttca accctgcagc
     3901 cctctgcact tacaggtgat tattcataac tctgagacag tgttggcagc ccagaagaca
     3961 ttcctcaaag actcaagaca gggttcccat gcatcactag aatagtcttc aaccctgcat
     4021 cccttccctc ttgcaagtga ccattcgtaa ctctgagaca gtgttggcag ccaagttaac
     4081 aagcaaatgc tgggagaact gctctcagga tgttttccaa gatgttagtt accacctgca
     4141 aggagctgat accgtgattc cagaaaatct attcaagaaa catgtgta
//
