LOCUS       XM_039092640            4447 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC102548714), transcript variant X1, mRNA.
ACCESSION   XM_039092640
VERSION     XM_039092640.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092640.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4447
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4447
                     /gene="LOC102548714"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102548714"
                     /db_xref="RGD:7616489"
     CDS             636..2120
                     /gene="LOC102548714"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038948568.1"
                     /db_xref="GeneID:102548714"
                     /db_xref="RGD:7616489"
                     /translation="MHVQYVSTMLSFVHMNVISEKAVTYEDIHVNFTREEWALLDPSQ
                     KSLYRDVMLETYRNLTAVGYYWKDQSIEENCQNPGRPARCIIRDRCIYIYLSQGLFKV
                     MKGFTLERSPMKVCSIKNVFASHSHLHTCKRTLTGDFVYYNSVQINRRTQREEKPYDF
                     NPCGKTFACCSNVGCQKRTRTGEKPHTCNLRGKAFAGQSDLQSHKRMNTGEKSYECNQ
                     CGKAFAHHSGLQFHKSAHTGVKPFVCNLCGKGFAGNNDLQRHKRTHTGEKPYECDQCG
                     NAYARHSTLQRHKRTHTGEKPYECDQCGNAYTRHSTLQSHKRTHTGEKPYECNQCGKA
                     FAYYSVLQSHKRIHTGEKPFSCNLCGIGFASNNNLQSHKRTHTGEKPYECDQCGKAFA
                     RHSVLQNHKRTHTGEKPYECNQCGKAFAHHSTFQIHIRTHTGEKPYECNQCGKTFTQK
                     TNLQRHRRTHTGEKPYESTHCGEAYAGHSDLQIRESTHTAETAN"
ORIGIN      
        1 aagaggaagt cagagtacat ctgtatgcag atgatgttac agcatacagg agtgacctca
       61 aaaattctat cagaatttct ggagctgata catactttca gtgatgtggc tgaatacaaa
      121 attcactcaa acaaaacagt agtgctccat tatacaaatg ataactggaa ccaggttgta
      181 ataagggaaa caacactctt tacaatagcc actaatagta gaaaatatct tgatgtaact
      241 aatgactcaa gtgaaagatg tgtataccat gaacttcaaa tccccgaaga cagaaattta
      301 agaatactta aaaagatgga aagatcttcc atactcagaa tgaatataat tcatactaaa
      361 aatgcctatc tcatcaaaag ctcattgttt ctgcagtcaa taattattta tacaacatct
      421 atgatatgtg cttattcttg ttgatctttc tacttgtctc tttatgcctc ttaattggca
      481 tttcttttca agggtatatc ttattcaaaa ggtgaagaaa tgaaagatgt tagccttatt
      541 cagtttcctt ctctaatgag ttagtgatta cattacaact tctgtgtcag gaagtacgtt
      601 ggagaaacac tagaataata tattaccaat gaaatatgca tgttcaatat gtaagcacca
      661 tgctttcttt tgtacacatg aatgtgatat ctgagaaggc agtgacatat gaggacattc
      721 atgtgaactt tactcgggaa gaatgggctt tgctggatcc ttcccagaag agtctctaca
      781 gagatgtgat gctggagacc tacaggaacc tcactgctgt aggctattac tggaaagacc
      841 agagtattga ggaaaattgt caaaatcctg gaaggccagc aaggtgtatt ataagggaca
      901 gatgtatcta tatctatctt tctcaaggcc tcttcaaggt gatgaaagga ttcacactgg
      961 agagaagccc tatgaaggtg tgcagtataa aaaacgtgtt tgcaagtcac agtcatcttc
     1021 atacatgtaa aagaacactt actggagatt tcgtatacta taatagtgtc caaataaaca
     1081 gaagaacaca aagagaagag aaaccttatg attttaaccc atgtgggaaa acctttgcat
     1141 gttgcagcaa tgtgggatgc cagaaaagaa cgcgtactgg agagaaacca cacacatgta
     1201 acttacgtgg taaagcgttt gctggtcaga gtgatcttca aagtcataaa aggatgaata
     1261 caggagagaa gtcctatgaa tgtaaccaat gtggtaaggc ctttgcccat cacagtggtc
     1321 ttcaattcca taaaagtgca catactggag tgaaaccatt tgtttgtaac ttgtgtggta
     1381 aaggctttgc aggtaacaat gatcttcaaa gacataaaag aactcatact ggagagaagc
     1441 cctatgaatg tgaccaatgt ggtaatgcct atgcccgtca cagtactctt caaaggcata
     1501 aaaggacaca tacaggagag aagccctatg aatgtgacca atgtggtaat gcctataccc
     1561 gtcacagtac gcttcaaagt cataaaagga cacatacagg agagaagccc tatgaatgta
     1621 accaatgtgg taaggccttt gcctattaca gtgttcttca aagccataaa agaatacata
     1681 ctggagagaa accattttcc tgtaacttat gtggaattgg ctttgcaagt aacaataatc
     1741 ttcaaagcca taaaagaact catactggag agaaacccta tgaatgtgac caatgtggta
     1801 aagcctttgc ccgacacagt gttcttcaaa atcataaaag gacacataca ggagagaaac
     1861 cttatgaatg taaccagtgt ggaaaggcct ttgcccatca cagtactttt caaatccata
     1921 taaggacaca cactggagag aagccctatg aatgtaacca atgtggtaaa acctttacac
     1981 aaaagacaaa tcttcaaagg cataggagaa cacatactgg agagaaacct tatgaaagta
     2041 cccattgtgg tgaagcctat gctggtcaca gtgatcttca aattcgtgaa agtacacata
     2101 ctgcagagac ggccaattaa tgtaacagag atgataaaga tcctttcctg ggcatcatca
     2161 aagtcataaa aagaatgcag gctagaaaaa cacacacaca cacacacaca cacacttcct
     2221 aaaatccaag cacattgatt ccccatgaac agttggtact gtaaatctgt atgtttttgt
     2281 aaaagtgaaa ggagcctttc catttcccaa ttaagcaaga aaatgaagca atattgtaga
     2341 tatactttaa ctggtgtgtt ttttactttt tatattggat attttccatt tacatttcaa
     2401 atgttattcc ctttccaggt ttcccatcca aaagccccgt atcccatgcc catttcctgt
     2461 ccttatatga ggttgttccc caaccaccca ctaaagccag gctggtcaac cctctgaaca
     2521 tatcaatgta ttaaatatcg atatgccttt gctaactgcc ctcctagtta aattttatcc
     2581 attaattaac tagattcatt ttgctcattt ggagaactaa taatgttaca gtatcaaccc
     2641 cccaaaagca cttgtaccct ctgtgttcag cttcaagttc gtttctgaac agtttccatt
     2701 tcgcattcac tttcagttga tttccactgc aaggacaatc ctcacaatct tctccaggaa
     2761 tgagcaggca atctcaccca gaccatccac ccatacacac tagcttagtg gtcagatgag
     2821 tgtccctgtg agggtctctg ggtgctggga tttgtagcta ggataagggg acacagctct
     2881 acagtgatgg cttcaggagg taaaagcatc agcagactca gactaaggcc cgagcttaag
     2941 tcacagggga gggtgagtcc acaagctgag agccaagcgg gagccccaaa accaacctca
     3001 agaaatcaga aaatcagtgc ctctgactgc caaaagtaag gacctggttc ctgaatgaag
     3061 tttcagaacg gatttgtcag cctgtctgga aaatacaaag accagcacat ccgtgggcat
     3121 ggcccaagtt agctgctact atgctagacc aaaatattat atatatatgt acattcactt
     3181 ttaaaaggtt atacaccgtg ggaaaatatt aattaggaat taatagttgg tttcagaaat
     3241 cagtataaaa ttaccagtaa tgatacaatc ataaacagat aaggtaaatg gaagatttgt
     3301 ttaagtaaat tcttttttca cattaattaa tgcattcact ttacattctg accttagccc
     3361 ctgttcttct ccaccaagga ccaccctcac aaatccctgc caccattatg ccatgcacca
     3421 ttcttattag aaaacggaaa acaccccttg ggtacctctc tgactgggac atccagttcc
     3481 agcaggacta actacaccct ctctcaccga ggtccaccta ggcagtccag ggagaggaag
     3541 gggatctaat gtcaggcatc agagtcagag acagccctaa ctcccaactg attgggagcc
     3601 caccaagctg cacatctgct acaaacatga ctagggctgg atccatcatc agcatggtgt
     3661 tagttggtgg ttatttctct gggagccccc atgggctgag gtaagttgaa gatatgggtc
     3721 ttcttgtggt gtccttgagc acttgggctt ggtcagttct aactcccact gttctataag
     3781 actcttcgag ttctgaccaa tgtatggctt tgggtctctg tacccgtttg tatcatctcc
     3841 ttgatgaaac atctcaggag aaagggatgc taggctctgg tctgtaagca taaaagaata
     3901 tcattagtag tgttagggaa tggttatctc acatggcatg gacctcaagg tgggctagcc
     3961 atcagttggc tgttccttaa gtctcttctc caccttaagc cctgtgcatc ttgtaggtaa
     4021 tatatacttt gggttgaagg ttttatgggt gagttatgtc cccttccctc tattaaaagt
     4081 ctgaactcgc tacagaagtt gaccacttca atctccatat gcttagaact aggagtctca
     4141 gctacacaca cccaacagac tcccaagtag tcttcagtat ccaagggctc cagctagtcc
     4201 tagagatgcc ccgtacaatc ccttctctct cccagacact gacttcttcc tctcccacct
     4261 aattccctct cttcatccac ctccaatgat tattttcttt ccccttctga gtgagattca
     4321 agcatcctcc cttgagctct gcttattgct tagttccttt gggtctgtgg cttgcagcat
     4381 ggttatgctg aaatttatgg ctaatgtcaa tttacaagtg agtatatacc acatgtgtct
     4441 ttctggg
//
