LOCUS       XM_039098323            2879 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 729-like
            (LOC102548633), transcript variant X1, mRNA.
ACCESSION   XM_039098323
VERSION     XM_039098323.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2879
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2879
                     /gene="LOC102548633"
                     /note="zinc finger protein 729-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 10 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 41 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102548633"
                     /db_xref="RGD:7713719"
     CDS             14..2194
                     /gene="LOC102548633"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038954251.1"
                     /db_xref="GeneID:102548633"
                     /db_xref="RGD:7713719"
                     /translation="MLRVCSVYLQDALTYDDVHVNFTREEWALLDPSQKSLYKDVMQE
                     TYRNLTAIGYNWEDHSIEEHCQSFRRHERHERCHTGEKTSENTQCGKAFAQHSHLQRH
                     KSTHTGEKLYECKPRDKAFTYDSQLQTLERIHTGEKPYKCNQCGKAFERRCNLGRHKL
                     IHTGRKSYKCNQCGKAFAQHSHLKTHGITHTGEKPYECDQCGKAFAYHSSLQVHKRIH
                     TGEKPYECDWYGKAFVDQNDLKRHERIHTGEKPYKCNECDKAFGNHRNFRLHKMMHAG
                     EKLYKCNECGKAFSQISHLQTHKSTHTREELYECKQCGKAFTCHNELQSHKRIHTGEK
                     SYECNQCGKVFKSHRYLQVHKTIHTGEKPYVCDQCGKAFAHGPLRWHKIMHTRKKTYK
                     CNQCGKAFARHSHLKTHGVTHTGEKPYKCDQCGKAFASHSYLQVHKRIHTGEKPYECD
                     QCGKAFTSHSYLQVHKRIHTGEKPYVCDQCGKAFAQLSHLQVHGITHTGEKPYKCAQC
                     GKAFASHSYLQVHKRIHTGENLYECNQCGKAFASHSPLQVHKRIHTGEKPYVCDQCGK
                     DFVVQSDLKRHKRTHTGEKPYKCNECGKAFVRNGSLRTHKVIHTGEKPYKCNECGKAF
                     VWNGSLRTHKVIHTGEKPYKCNECGKAFACNTSLRTHKAIHTGVKRFKCKQCGKAFVG
                     QNYLKKHERIHTGEKLYKCNECGKAFVFDSSLRKHKAVHTGVKP"
ORIGIN      
        1 gccatggcag gtgatgttaa gagtctgctc tgtgtattta caggacgcat taacctatga
       61 tgatgtacat gtgaacttca ctcgagaaga atgggctttg ctggatcctt cacagaagag
      121 tctctacaaa gatgtgatgc aggagaccta taggaacctc actgctatag gttacaattg
      181 ggaagaccat agtattgaag aacattgtca aagtttcaga agacatgaaa ggcatgaaag
      241 atgtcatact ggagagaaaa cctctgaaaa tactcagtgt ggtaaagcct ttgcacaaca
      301 tagtcatctc caaagacata agagcacaca tactggagag aaactctatg aatgtaagcc
      361 acgtgataaa gcctttacat acgattctca gcttcaaact cttgaaagga ttcatactgg
      421 agaaaaaccc tacaaatgta atcaatgtgg taaagccttt gaacgtcgtt gtaatcttgg
      481 aaggcataaa ctaatacata ctggaagaaa atcctacaaa tgcaatcagt gtggtaaagc
      541 ctttgcacaa cacagtcatc tcaaaacgca tggaataaca catactggag agaaacctta
      601 cgaatgtgat cagtgtggta aagcctttgc atatcatagt tctctccaag tacataaaag
      661 aatacatact ggagagaagc cctatgaatg tgattggtat ggtaaagcct ttgtagatca
      721 gaatgatctt aaaaggcatg aaagaattca tactggagag aaaccctaca aatgtaatga
      781 atgtgataaa gcctttggaa atcaccgtaa ttttcgactg cataaaatga tgcatgctgg
      841 agaaaaactc tacaaatgca atgaatgtgg taaagccttt tcacaaatca gtcatctcca
      901 aacacataaa agcacacata ctagagagga actctatgaa tgtaaacaat gtggtaaagc
      961 ctttacatgc cataatgaac ttcaaagtca taaaaggatt catactggag agaaatccta
     1021 tgaatgcaat caatgtggta aagtctttaa atctcatcgt tatctccaag tacataaaac
     1081 aatacatact ggagagaagc cctatgtgtg tgatcaatgt ggtaaagcct ttgcacatgg
     1141 tcctcttaga tggcataaaa taatgcatac taggaaaaaa acctacaaat gcaatcagtg
     1201 tggtaaagcc tttgcacgac acagccatct caaaacgcat ggagtaacac atactggaga
     1261 gaaaccttac aagtgtgatc aatgtggtaa agcctttgca tctcatagtt atctccaagt
     1321 acataaaaga atacatactg gagagaagcc ctatgaatgt gatcaatgtg gtaaagcctt
     1381 tacatctcat agttatctcc aagtacataa aagaatacat actggagaga agccctatgt
     1441 atgcgaccaa tgtggtaaag cctttgcaca actcagtcat ctccaagttc atggaataac
     1501 acatactgga gagaaacctt acaagtgtgc tcaatgtggt aaagcctttg catctcatag
     1561 ttatctccaa gtacataaaa gaatacatac tggagagaat ctctatgaat gtaatcaatg
     1621 tggtaaagcc tttgcatctc atagtcctct ccaagtacat aaaagaatac atactggaga
     1681 gaagccctat gtatgtgatc aatgtggtaa agactttgta gttcagagtg atcttaaaag
     1741 acataaaaga acacatactg gcgagaaacc ttacaaatgt aatgaatgtg gtaaagcctt
     1801 tgtacggaat ggtagtctcc gaacacataa agtaatacat actggagaga aaccttacaa
     1861 atgtaatgaa tgtggtaaag cctttgtatg gaatggtagt ctccgaacac ataaagtaat
     1921 acatactgga gagaaacctt acaaatgtaa tgaatgtggt aaagcctttg catgtaacac
     1981 tagtctccga acacataaag caatacatac tggagtgaaa cgtttcaaat gtaagcaatg
     2041 tggtaaagcc tttgtaggtc agaattacct taaaaagcat gaaagaattc atactggaga
     2101 gaaactttac aaatgtaatg aatgtggtaa agcctttgtt tttgattcta gtctccgaaa
     2161 acataaagca gtacatactg gagtgaaacc ttaagaatgt aagcaatgtg gtaagccttt
     2221 gtaggtcaga atgaccttaa aaagcatgaa agaattcata ctggagagaa accttacaaa
     2281 tgtaatgaat gtggtaaagc ctttgtatgt aatgctagtc tccgaaaaca taaagcaaca
     2341 catactagag tgaaacctta tgattgtaag caatttagta agttctttgc ctctcatgat
     2401 caacttcgac aacatgaaag aattgataca ggagagaaac cttaaaatgt agtcaatgtg
     2461 gtaaagcctt ttcacaatca agccacctcc aactacataa aagaacacat acatactaaa
     2521 gagtaacctt atgaatgtaa ccaatgtaat aaagccttta ctgtgatctt caaaggtatg
     2581 gtggtttaaa tatacttggc ccattgcaag tggcagtgtt aggaggtatg gcctttttgg
     2641 agtagatgtg gactttgagg aagtatgtca ctgtggggga gggtgggctt tgagtcccca
     2701 tgcttaaact ctacccaggg cagaagagtc ttctggctgc cttctgatca agatgtagaa
     2761 ctctctcctc cagcagcatg tctgcttgga cactgacatt ccttccacct tgataataga
     2821 ctgaacctct gaatctgtat acctcccctc cccccaatta aatgtccttt ctaagagtt
//
