LOCUS       XM_039087385            5205 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102548607
            (LOC102548607), transcript variant X1, mRNA.
ACCESSION   XM_039087385
VERSION     XM_039087385.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5205
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5205
                     /gene="LOC102548607"
                     /note="uncharacterized LOC102548607; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     10 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102548607"
                     /db_xref="RGD:7629087"
     CDS             1056..1493
                     /gene="LOC102548607"
                     /codon_start=1
                     /product="60S ribosomal protein L35-like"
                     /protein_id="XP_038943313.1"
                     /db_xref="GeneID:102548607"
                     /db_xref="RGD:7629087"
                     /translation="MGSFLLDLPAHCRAASAMSNTAMAKIKAQDLRSKEEEELLKQLG
                     DLKVELSQLRVSKVTGRALSRLSKIRVVCKFIVWVLTIINQTQKENLRKFYKGKKYKP
                     LDLRPSKIRAMRRHLTKPEEKLETKKQQWKEWLYPLRKYAVKV"
ORIGIN      
        1 caccactata aacttacaag ctaagtaaat tcacccatga agtaagccta tgttgatttt
       61 gttatactac aataggcttt gatctgagat ttctagagag aagtcattgt tgccaaggga
      121 ttgatgaagc aactgtggta tagacggtgg tgagaattgt tccttgattg ctgtgtatcc
      181 ttgagcaaaa gagaaacttc cctggactca tttccttgac ctgtaaaatg ggcgaaatca
      241 tcatgaacaa gagtgggcat ttggttctga tacctgatct tcagtttaag gtgtagtttt
      301 tcaatcagca ttaatggtta ggataagcat aaaccttggg gcctaagctc aggacctctt
      361 cctttttgac tgaagactcc actcttcagt ctaggttttg ctgccagatg gaggccggat
      421 atcctgaatc cccaaatcct actgctaaat gactttttct ctagaagtga ctagagtttc
      481 ttgcttcaga tctaagaatc atgcatttta tggttctacc ataccaaaca aattgtagcc
      541 aattacttaa ggttaacaat tgaaattccc agtggtggta aagaagctag tcatttgtaa
      601 gtcatttgtg gtaatcttta gtaactgata attagacact aatcacctca tttgcttagc
      661 gttgttctta cttagtaaga catttaagtg agttaattac aagaaaaaga attgagtggt
      721 aattaagtga caattaaggg gtttatctat gtaagcaaag tacattggtt aaataatagt
      781 gtttagaacc agagcgatga actgaatgat ttaagacagt gtgataagaa ctctggtccc
      841 cttgtgtgaa tgaccattgt gaatcggcct ttgtttatcg acgaaaccaa ggaaacaaat
      901 ttcagattca gtgttcctca gcctcacctc cgtcaagatc ctggacccaa gaatcgtttg
      961 ttacagtatc tacttcttac actgtgggct ttctgccaac attgctacgc tatccttcac
     1021 tctgtggtta cagtagtact ctctgaattg tgacaatggg aagttttctt ctggacctgc
     1081 ctgcacactg tagggcagcc tcagccatga gcaacacagc gatggccaag attaaggctc
     1141 aggacctgcg cagcaaggag gaggaggagc tgctgaaaca actgggcgat ctgaaggttg
     1201 aactgtccca gcttcgcgtc tccaaagtga cgggcagagc cttgtccagg ctctccaaga
     1261 tacgagttgt atgcaaattc attgtctggg ttctcactat cattaatcag actcaaaagg
     1321 aaaaccttag gaaattctac aagggaaaga agtacaaacc cctggacctg cgacccagta
     1381 agattagagc catgcgccgc cacctcacca aacctgaaga gaagctggag accaagaagc
     1441 agcaatggaa ggagtggctg tacccactgc gcaagtacgc agtcaaggtc tgagaggaca
     1501 acaataaaat gcaagaatga ctgggggaaa aaagagttta tggagcatgc gttactgaaa
     1561 ggcacctaca ctcccaggaa tttccttggg cactcccgaa gagtcacaga ataaacttac
     1621 agactgctgc agtatcaaag attccaaagt agtctatgtt tacctcgtat ctcttctagg
     1681 aagggctctg atgaagacct cccaaaggta attgagttct gtgagtccca aagcccctcc
     1741 aggaggggat aatagatgaa atcacaggag aatctcttga ctcaagatgg caacagcact
     1801 gtctgaccca gaagaagcag atatacagca tataccagaa cacatcttga agggcctaca
     1861 cttttaaatg tattttttaa tttattcttt cagaatttct tctatgttgt atatgatgca
     1921 ttttggtcaa atctaccctc ctgtccctcc tctctagctt ctcccagatc tctgtcatca
     1981 tattaccacc tccttcccat cttcctatga tttctttctt gttttatacc acaaagtcta
     2041 ctcagtatag tggtatgtac ataggtgtaa gagcccccat aacgcactgg cagcatccct
     2101 gaagaaaaac tatgcttcct ccccaggcag ccatcagatg ccagtagccc ctagaacaga
     2161 gaagggagtt tcatgagcca ctctcccatc tatgttggat tatgactggc ttgattttta
     2221 tgtacgcact tacagtccct gtgatttcct gtgtacacgc ttgtcatgca tcgaaaagca
     2281 atttacagta atcttctata atccctggct cttcaaatct ttgcatccct ttttggagat
     2341 gatccctgag ctttcgtttg ggggctatag atgttccatt taaggctgaa catcttagag
     2401 cctcttattc ttcatagttt tgtcttagga ttttattgtt atgatagaac tccacaactc
     2461 aagcaatttg cgaggaaaga acttacttca cctagcagct tataagtccg ttatcaaggg
     2521 aagtcaagac aggaattcaa ggcaggaacc tagatccaga agctgacgca gaagccacga
     2581 agtagtgctt cttcctggct tgctcctcat ggatttctca gtctgtcttg taacagctcc
     2641 taggaccaca ggcatttggg tgttggaaac cataacaaac agggtcctca cacatcattt
     2701 ttcagtcagg agaacgcatc aaacacttgt ccaaaggaca accttatggg attattttct
     2761 caattaagat tccttatccc agatgatcct agcctgtgta aagctaacgt aaaaacaagc
     2821 cagcacaagt tttgaccact tattggatca gtatcaaaag ccatttactg caaaaagaag
     2881 tttctctgag actttgttgt ctagaatgaa cttttgaacg tttaacatgg gtctcatctg
     2941 tgggtgtgaa gatacatatt tagagaacaa tttggtgcta agtccatttt agaaatacaa
     3001 gagtagtagg ttctccttta gagcctatga cttgtgtgaa gacaggttct tagcccctaa
     3061 atgatgccgg ctgtggattt catctcctgg aatggtctta agtccaatca gaatatggtt
     3121 gtttattcat ataacatttg tgctacagct gtcctagtga gcctatattg ccaggttggt
     3181 agttatctta gggttaacag atgaataaga ctgttgattg tcctggtaca agtttataaa
     3241 aatcacgcct acatgcaaag agatgagaga ttttgctagc ccacacagcc aaattaatag
     3301 tgcacgctga gattacttaa gacttagacc aacaccctag tgtgtattca gcctgcttat
     3361 ttactctgct cttaaaaccc aattttactt gccttaagtg tatagcttta atcttaaatg
     3421 atctactctt cacataccct gactcagggt aatgcatgtg cgtattcctg ccttggtgac
     3481 catttgatga aagcagccaa caggttgaaa gcagcattat atgattaaat atctaccatg
     3541 aatgtgggaa acaatataca gatagaattt ggtggcatgt ttgcagtact atttacttac
     3601 tattctgagt cacttggggt cagtaaagta actaaatcct gtaaaacttt gctcgagatc
     3661 tttgtaaaga acattttctg tgctgttcaa taaatacaga gcaaggtcct ttgttaggga
     3721 tagtcagaca tcatgaaggc attatacaca gacagcagca aggactcagt tagattaagc
     3781 atatgacagg cagatcactg atagcccaac aaccacaaac ttcagacaga agacacagtg
     3841 agaaaagtgg aaattcaaac ttgatctcgc tactgcttat agtagtccaa aagggaattc
     3901 tgagttttag ttccttaacg tgacaccaat gtgtttgttc ttctggggtt atctttctgg
     3961 tatttagcca acacagttga ggaataccct ctcacccagc agcctgcata gcatcttcta
     4021 gcatctagcc atggtgaagc tagggagaag tgaacaagtg aataccagct tatttctcca
     4081 tatcctatga gcaagagtgg atcttactct caagctctga cagtcagtca agagcattgg
     4141 cctgtgctgt tttgtttgca tctttggggt ttcttgacta acaatctaaa ggcaggtatc
     4201 ctgcatctga caccaaggcc ccgcatttta ctacttgaaa cctactctaa actactattt
     4261 aacaccatat gaattttgga ggcatacatt aaagtgttgg aaacactgag tttaaaaaaa
     4321 actacattaa aacaaaacaa cctgtagaac aatggttctc aacctggggg ctgcaatccc
     4381 tttgtggggc ggggcggggt gtctcaactc ccttgggagt cataatatca gatttggcac
     4441 atcagatatt tacattatga ttcatgaatc gtattacagt atgatccaac aattagatgt
     4501 atgaagcagt gctgaagcag ttttctagtt gcgaggcacc accgtgcaag gatcgcgaca
     4561 ctaggaaagt tgaggcccag cacattagaa actccacaca gttaggcagc atgtctactt
     4621 acttgctgtt atataacttt agagtcaagg acagcgtttg gcatttaatc gacagagtca
     4681 gtattcaaaa tccatctgag gcgccttggt ctggtgctct ctgactagtg cttgaacgat
     4741 gtatgcacgt ggatggaagg aaactgtttt caggttgagc acaagtaagt ccatcaccta
     4801 cttcacaggg ttgttgtggt ttaatttcaa aggctaattg cagcaagtgt tgagaataaa
     4861 gatttgagtg gattaataat gataacatgc ttgctttaaa agataagccc tctgattaca
     4921 gtagccttcc aattttggat gttttcactt cataaaatta tcagggatat agatgggtag
     4981 actctgattc acattcattc aaccatgtgg tggtgttggc atgtgtgaca caattaagaa
     5041 tactatatac caggttttga cattctggca tcaatgtagc atagatcact tttgtctaca
     5101 ttttattggc cagatcacac tgtgtctctg ataacattgt ctctatgggc agctactggc
     5161 taacagtaac taatatttat taaaagggaa catgaatttt tgtgg
//
