LOCUS       XM_039103577            5936 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC102548546), mRNA.
ACCESSION   XM_039103577
VERSION     XM_039103577.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103577.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5936
                     /gene="LOC102548546"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 2 Proteins, and 89% coverage of the annotated
                     genomic feature by RNAseq alignments, including 25 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102548546"
                     /db_xref="RGD:7564391"
     CDS             190..1875
                     /gene="LOC102548546"
                     /codon_start=1
                     /product="zinc finger protein 431-like"
                     /protein_id="XP_038959505.1"
                     /db_xref="GeneID:102548546"
                     /db_xref="RGD:7564391"
                     /translation="MDAVNYDDVQINFTGEEWALLDLSEKRLYKDVMLETYRNLTAIG
                     YKWGDCNMEEHCQSSRIYERHERDHLQDKNYVYTQCDKAFTHQNYQRHGRIDMGEKPC
                     EYNHCGKAIAYKNYLLTCKRTHTGKKPYACNECGKAFAQQCHLQVHKRTHTGGKHYEC
                     NGCGKAFACQQYLRLHKRTHTGEKLYECNECGKSFSSQQYLLIHKETHAREETYKCKC
                     GKACASHQSLQIHKRTHTGEKPYECNQCGKTFAQKYHLQVHKRIHTREKPYQCNECDK
                     AFASQQYFQIHKRIHTGEKCYECNECDKAFVSHQILQIHKRTHTGEKPYECTECGKAF
                     AQKCHLQVHKRTHTGEKPYQCNECDKAFASQQYFQIHKRIHTGEKCYECNECGKAFVS
                     HQVLQIHKRTHTGEKPYECNQCGKAFAQNHHLQVHKRTHTREKPYQCNECDKAFASQQ
                     YFQIHKRIHTGEKCYECNECDKAFVSHQILQIHKRTHTGEKPYECTECGKAFAQKGHL
                     QVHKRTHTGEKPYNCSECGKTFARKYHLQVHKRTHTREKPCECNECDEAFSSQ"
ORIGIN      
        1 aaccccaagg gaaggcactc ttgtcactca gtcctaccag ccaatcagga cttccagatg
       61 gaccgccagt cagaaaggga ggcaggctct tccgggtgac ttgcttcctg cttggttgga
      121 aagctgagta gtttatggct ttctgtggta ctaccgagag ctgtggtgca ttcacgttga
      181 gctggtgaaa tggatgctgt gaactatgat gatgttcaaa taaatttcac tggggaagaa
      241 tgggccttgc tggatctttc tgagaagagg ctgtacaaag atgtgatgct ggagacctac
      301 aggaacctca ctgctatagg atacaaatgg ggagactgca atatggaaga acattgtcaa
      361 agttctagaa tatatgaaag gcatgaaaga gatcatcttc aagataagaa ttatgtatat
      421 actcagtgtg ataaagcctt tacacatcaa aattatcaaa gacatggaag aattgatatg
      481 ggagagaaac catgtgaata taatcactgt ggtaaagcca ttgcatataa aaattatctg
      541 ctaacatgta aaagaacaca cactggaaag aaaccctatg catgtaatga atgtggcaaa
      601 gcctttgcac agcaatgtca tctccaagta cataaaagaa cacatactgg agggaaacac
      661 tatgaatgta atggatgtgg taaagccttt gcatgtcagc aatatctccg attacataaa
      721 aggacacata caggagagaa actttatgag tgtaatgaat gtggtaaatc cttttcaagt
      781 cagcaatatc tcctaataca taaagaaaca catgctagag aggaaaccta taaatgtaaa
      841 tgtggtaaag cctgtgcaag tcatcaaagt ctccagatac ataaaagaac acatactgga
      901 gagaaaccct atgaatgtaa tcaatgtggt aaaacctttg cccaaaagta tcatctccaa
      961 gtacataaaa gaatacatac gagagagaaa ccctatcaat gtaatgaatg tgataaagcc
     1021 tttgcatctc agcaatattt tcaaatacat aaaagaatcc atactggaga gaaatgttat
     1081 gaatgtaatg aatgtgataa agcctttgta agtcatcaaa tacttcaaat acataaaaga
     1141 acacatactg gagagaaacc ctatgaatgt actgaatgtg gtaaagcctt tgcccaaaag
     1201 tgtcatctcc aagtacataa aagaacacat actggagaga aaccctatca atgtaatgaa
     1261 tgtgataaag cctttgcatc tcagcaatat tttcaaatac ataaaagaat ccatactgga
     1321 gagaaatgtt atgaatgtaa tgaatgtggt aaagcctttg taagtcatca agtacttcaa
     1381 atacataaaa gaacacatac tggagagaaa ccctatgaat gtaatcaatg tggtaaagcc
     1441 tttgcccaaa atcatcatct ccaagtacat aaaagaacac atacgagaga gaaaccctat
     1501 caatgtaatg aatgtgataa agcctttgca tctcagcaat attttcaaat acataaaaga
     1561 atccatactg gagagaaatg ttatgaatgt aatgaatgtg ataaagcctt tgtaagtcat
     1621 caaatacttc aaatacataa aagaacacat actggagaga aaccctatga atgtactgaa
     1681 tgtggtaaag cctttgccca aaagggtcat ctccaagtac ataaaagaac acatactgga
     1741 gagaaaccct ataactgtag tgaatgtggt aaaacctttg cccgaaagta tcatctccaa
     1801 gtacataaaa gaacacatac tagagagaaa ccctgtgaat gtaatgaatg tgatgaagcc
     1861 ttttcaagtc agtaatatct gcaaacacat aaaggaacac acactaaaga gaaaatctat
     1921 gaatgtaagg aatgtggtaa agcctttgca aatcatcaaa ctcttcaaat atataaagga
     1981 acacatacta gagcgaaacc ctttaaatat aaagcctttg caagtcatca gactctcaaa
     2041 ggaaatatag gaacagatac taaagagaaa ccctatgaat ttaatgaatg tggtaaatcc
     2101 tttgcagaac agtttcatct ccaagtacat aaaaacacat tctgaagaga aaccctatga
     2161 atgtaatggc tggggtaaag tctttgcata ccaaacacat cttgaaaaca tgaaagaaca
     2221 gatattggag ataggtagga tagtttgcaa gaacctcttt ctgagtttta tgttgggtcc
     2281 acatattgag ttttagaaca tcctagacta tgtagagata tttgtgctaa gaaaacaaag
     2341 cagtgaaaca aaaaacatat atacactaaa acaagaagca tatatgagat tcagcccatc
     2401 aagaaaattg tgttaacaat gaaatatgaa agtatataga aagttcattt acccgtttat
     2461 aattccatag aaccatttgg tgaccccatg atcatagcag ggattcttac cacttttaaa
     2521 agacagaagg gataatggag cataatcatc tcatatgtga cctggactgt tttctcagtt
     2581 acactacttt tgatggatat gcaagtttat ttcctcacat ctacatcaaa tgtttcaggt
     2641 cttccatgat tccagatcca agaaatttgg tgcatgcttc tggcttcctt aggctcctgt
     2701 gtagggaatg tcagggggca ggaaagggag atggttgggg agggaaacac acttatagaa
     2761 gaaggggagg gagataggac atgggcttat atctgggaat ctgcgaaagg aaatatcatt
     2821 tgaaatgtaa ataaaaaatg tacaatggaa gaaggaaaat gtcaatagaa taaagcatct
     2881 tacataaaaa agacatatat gtgactcctt attttgaaaa atgttttctc acatatactt
     2941 ttttaaatta aaattaattt aatttagtta tatatggttt atcagtgtgt ttgtcaaatt
     3001 atttctagat accaaaagag tccagactaa gggatacatt gttgtgagct ggaaatcaaa
     3061 gcaaggccat gtggatattt atattatgtc ccaaaacaca taaaagatca atatcatcag
     3121 aatcttgttt agacttgttg cttaatgaag gttctgagcc taaatctcca tagtgtgaga
     3181 gaggaaacaa tacccatctt ttaaaagtgc ctgtctgata aaccaaaacc ccaagaagaa
     3241 gttaatctca aacatgttaa ataggcagga tagagagccc aagagaagat gcacagatta
     3301 cttgtaccag gatgaagttt gtacctccta taaagtcagg aaaattaatt tgcaactgaa
     3361 ttgtctaaag tgatagtttt ttgctttcct gctctctgca aatctctcag gtaagaactg
     3421 aatgtgtttg taatttcaga tgatattgag gttgtcatgg gttctatgaa tgagccagaa
     3481 gctacactaa gtctccagca atctggcatt taaaatgagc tttggagtac ggttggaaat
     3541 ttatggagga tggtttagct ctaaaagcca gaggatcaat aggctagagg gcagtgggca
     3601 aaatgaacct gaagccgagc tggctcatac tatcctctct ctacatccac ttttcttttc
     3661 tgggccaacc ccctgtaggt ctataactct ttcatttgtc ttggcaacta acttgtacct
     3721 gtcagtcaca gtaccttgga aggtctttct tggccatttc ctctttgatt ttaaatctaa
     3781 caagtgccat agtatcgtcc cagtaacatg cctggctggc agatgtactg cagaaacatt
     3841 tatgtctctt tgctttttgt tacaatgagt aaaacacttg ccctcatgga attttatatt
     3901 tacccagaaa tatcttctga gaaactgagt ccttctaagg tgaatgtccc tggggaagaa
     3961 acattaaacc ctatctgtat gccttgttgg agagaggtgc tgagtatgtt taagggtttc
     4021 atggatgtgg aaaattaatc ttattacttg gttaggttaa ttaaatatac atatcgcttg
     4081 cattctctct aatcctgaaa gggccacaag gttagattcg ttgacctata ttttgagcac
     4141 tgttccaact tagccaaact gaaaaattta cttttatttt gttttctttt atttcacgta
     4201 gaagaatttt accatgaatc acttttggac ctggaacttt acaaagacta cggtattcta
     4261 gaacatcaaa gaggtctgtc catcttgcca gcaggaaaag gcattacagt tgggcttgtc
     4321 atggctatgt agtgtggttt tttgaatttt taaaagaaag atgagtgtct gagtcagcct
     4381 tcttaaggta tccaggacaa agtgtcttgt cctaattcca gaaacaaagg gatccatcaa
     4441 atgcagccct tctgttttaa actctactgt cctctaatga tgagcaatat agttcatcat
     4501 tgattctttt ttaacttatc aaagtactat ccttatttta cagatggtga attgtaggct
     4561 cacagaggta attataattt caatacaatt aagtgtagtt gctcatattg tccatctgat
     4621 ccttctagtg aatgaagttg gaaaaaaact tactaagtca ggaatggtgg cagaggctta
     4681 tcctaattaa tggcccttag aaaatgggat gtaggcattt caggattttg atgatccaag
     4741 atgagagtga tcaatgaggt atagtaagag gcacacagaa ccaagcggtt gtgtgattaa
     4801 tgcccatagt tctccctaga gcttcaagtg tggaaggtca gggtcattgc tctagtaagt
     4861 gttttctatg gtgctcacat tgattgtgcc ctcccaggca aggagatcct atagtaagta
     4921 gacacataaa gattagaggt aatgatgttt tccaggtaaa gctcagaact ctaagcaggt
     4981 tgttcaaaat actcaaaatc ataacatcca ataggtgtta attatatcac atcagagata
     5041 aaactaccca tttctatttc tttgaaactt gatgtccatc tctgtcaggt ttatattaca
     5101 ttatggtttt ctctatggtg ctggacttca cactcactgt tgcactggtt aagtgagtca
     5161 ctttacacag atccaaggtg ttttgatgca gcacaccatg taggactccc gtctttttca
     5221 ctgctgctgt atattgcaaa tcatcccaaa ggactgtagt gaaagccatg agaaaacatt
     5281 tctgattgaa aatttcattt tgcattgttt ggttgttttc ctttctacca gaagctaacc
     5341 ttgcattata ttcttttata ggttcagctt ttccataaca aaggcctaat gaaaaaaaat
     5401 cctcaaggca tttttgtgca aacaattcct tttgattttg gggtagtaca tgatttcaca
     5461 gacttggtac caatgaaatt ttgggagtgt tttatgaata gtaaatattt tttctaaaca
     5521 ttctggctac cttttggaaa attagaagaa aaagaaattg gcatagagac taacagtaat
     5581 gtgagcatta ttattagttc attgagaaag aaaaggatct ctaaagaaaa gaatttggct
     5641 agtggaaaag gtagtggaag acaatactgg aattctcacc tgatctcctt tctcctttta
     5701 atccatgtgt atacaataaa ctgcatgttt acatgaatgt ctttatatgt ctctgcatgt
     5761 gatgtgtacc tatacatgtg gagaacagag gttgagtttg atcactgtca tagttattgt
     5821 tttggtgatg cgaagtttgt ataaaatgat tgaaaaagtg ttattcctag tgccagatag
     5881 caaacatgga gcaaattatt gcataaagaa aaaaatttag agatttttgc atagaa
//
