LOCUS       XM_039089916            5064 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC102548389), transcript variant X1, mRNA.
ACCESSION   XM_039089916
VERSION     XM_039089916.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5064
                     /gene="LOC102548389"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, 8 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments, including 11 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102548389"
                     /db_xref="RGD:7541342"
     CDS             697..2271
                     /gene="LOC102548389"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038945844.1"
                     /db_xref="GeneID:102548389"
                     /db_xref="RGD:7541342"
                     /translation="MYSLLLICLLLSLSLSLSLSLSLSLSTSRCFSCKSISYSKGREN
                     DGSLSSSVLFNNCLDAVTFNDVHVDFTSEEWTLLDPSQKGLYKDVMLETYWNLTAIGY
                     SLEDHNIEEHFQSSRRHGRPERSHTEEKPYEDMKCGEAFAHCSSLRAHERTHTGEKPY
                     GCNQCDKAFAYHSSLRIHERTHTGEKLYKCIQCGKAFSDQNTLQRHKRTHSEEKPCKC
                     NQCGKAFACHNILQNHERTHTGKKTYKCNKCDKAFTQRYYVRIHERTHTGEKPYGCNQ
                     CGKSFACLSSLRVHERTHTREKPYKCNQCSKDFASQSHLKRHERTHTGEKPYECNQCG
                     KAFSIQDTLRVHERTHTGEKPFECNQCGKTFKLHSQLRIHKRVHTGEKPHECDQCGKT
                     FACPSSFQKHKRIHSGEKPYGCNQCDKAFAIHSRLRKHERTHTGEKPFKCNQCGKTFS
                     QSNSLQVHKRTHTGEKPYECNQCGKAFPYDSSLRVHERTHTGVKPYECNQCGKAFGYH
                     SHLQRHERTHTGEKPY"
ORIGIN      
        1 tttttaataa ctaagtagta ctccagtgtg taaatatact acattttcta tgtctattcc
       61 tctgttgagg gacatctggt aaatattagt atcttgcctg tgtgtatgaa tatgcaccgt
      121 tgtgtgccta ttcctcatag tagtcaaaac atgacctcag aattcctgaa gttggaatag
      181 tagatagtta ttagtcacct tgtaagtaca gttgattcca attatttgca agactagcaa
      241 gagcacttat tttactggta aaccatccct cctgccctat gttgcttatt tatgattaac
      301 atttatattt ctaatgtttt atccatgtat tcgtaactgt aagcatgtat ttcctattag
      361 taagctctta ctaatattac agtttaaact ggggcactta aagtttcagg aagatgaata
      421 caaaactgta ttcaatttta tatctctgca ggaacttcag taaagacctc tgagttcttt
      481 ctattttgtt tgtttaattg attcttgcag gggaatcaag gtcttaatat atacctctgc
      541 atgccctgtg tcccattaca tggactagcc tggcatccac ctcagtgaga taggtttgtc
      601 tctggctcct gattgctggg attaaaggcg tgagcaagta cacccatctt acctatcctt
      661 tctgttgtca gtaatcattc aaatcgtgtc tctgatatgt actccctact gttgatctgt
      721 ttgctcctct ctctctctct ctctctctct ctctctctct ctctctctct ctccactagt
      781 aggtgtttct cttgcaagag tatatcttat tcaaagggca gagaaaatga cgggtcacta
      841 tcctcttcag ttctcttcaa caattgcttg gatgcagtga cctttaacga tgtgcatgtg
      901 gacttcactt ccgaagagtg gactttgttg gatccttccc agaaaggtct ttacaaagat
      961 gtgatgctgg agacctactg gaacctcact gctataggtt acagtttgga agaccataat
     1021 attgaagaac attttcaaag ttctagaaga cacggaagac ctgaaagaag tcatactgaa
     1081 gagaaaccct atgaagatat gaagtgtggt gaagcctttg cacattgcag tagtcttcga
     1141 gcacatgaaa ggacacacac tggagagaaa ccctatggat gcaatcagtg tgataaagcc
     1201 tttgcgtatc acagcagtct tcgaatacat gaaaggacac acactggaga gaaactctac
     1261 aaatgtattc aatgtggcaa agctttttca gatcagaaca ctctacaaag acataaaaga
     1321 acccactcgg aagagaaacc ctgtaaatgt aatcaatgtg gtaaagcctt tgcatgtcat
     1381 aatattcttc aaaatcatga aagaactcac actggaaaga aaacttacaa atgtaataaa
     1441 tgtgataagg cctttacaca acgctattat gtgcgaatcc atgaaagaac acacactgga
     1501 gagaaaccct atggatgcaa tcagtgtggt aaatcctttg cgtgtctcag cagtctccga
     1561 gtgcatgaaa gaacacatac tagagagaag ccctacaaat gtaatcagtg tagtaaagac
     1621 tttgcgagtc agagtcatct taaaagacat gaaaggacac acactggaga gaaaccctat
     1681 gaatgtaatc aatgtggtaa agccttttca atccaggata ctctccgagt gcatgaaaga
     1741 acacatactg gagagaaacc ctttgaatgt aaccagtgcg gtaaaacctt taaactacac
     1801 agtcaacttc gaatacataa aagagtacac actggagaga aaccccatga atgtgatcag
     1861 tgtggtaaaa ccttcgcatg tcccagtagt ttccaaaaac acaaaagaat acattctgga
     1921 gagaaaccct atggatgcaa tcagtgtgat aaagcctttg caattcacag tagacttcga
     1981 aaacatgaaa gaacacatac tggagagaaa cccttcaaat gtaatcaatg tggtaaaacc
     2041 ttttcacagt ccaatagtct tcaagtacat aaaagaacac atactggaga gaaaccctat
     2101 gaatgtaatc aatgtggtaa ggcctttccg tatgacagca gtctccgggt gcatgagaga
     2161 acccatactg gtgtgaagcc ttacgaatgt aaccagtgtg gcaaagcctt tggctaccac
     2221 agtcatctcc aaaggcatga aaggacacac actggagaga aaccttatta acataagcaa
     2281 tgtgggaaag cctttgtaag tctcagcaaa cttcagaggc ataaatgaat tcatcctgga
     2341 gagaaatctc aagaatgtat ttaatatggt gaaggcgtta aatggtttta tagtcttcat
     2401 catcacaaaa gtataccaga gagaaattct atgagtgtag gcaatgtgct gaagtcttta
     2461 tgttatggag cccacttaga aatccaacac gacacaaaaa ccagggctac gggtattcac
     2521 tatgtagttg atctgtgtcc actgatgcag gcaggatgta ggttttacag tctaaagatc
     2581 atatccattt tctctttgtg gttaacaaca ggtattgtgt tttggggtaa aaaaagatga
     2641 ataacagaaa ctgtcatttg gaacagtcaa tatgttttgt gaaataggaa atgtggttag
     2701 gaacaatcat gttttgggaa acaaaaatga attatggaag cttatcaatt attagggagt
     2761 ctccagctcc cttatgttct gggaacttga atttagtttc gctctatgat taaatgaagt
     2821 cttatagcaa aatggctgta cttaggacag tttcttttac ttgttcatgg tatttgcata
     2881 ttacagtcat cttcgaattc ataaaagtga gtacccctat aaatggagtc aatattagga
     2941 ggccttttgt cagaacagtt atttacaaat atctaaaata acatgtcctg gcaagaaacc
     3001 ctacaaatgt aatcaatgtg attaagcaca gttatatgcg actaggtaga agaacacctg
     3061 cctgagacga cactaggagg taagcaatgt ggtaaaacct gtgcgagtaa ctgtgctcag
     3121 gagaaaaagc catagtgcaa agaaacctgt gaatgcagtc attgtggtaa agctttacgt
     3181 gttatgatct ctttatgcaa tattaaaagc cttagtgtgc aattaatctg ttaaaggctt
     3241 tacacatcac agtagtattt agggacctga aagaattcat actatagggg atctataagg
     3301 atcctataag aactgtagcc aacatacttc agttgcacaa gattattctg aagagaacat
     3361 ctgaccagtg ttaacaatca agcattatgg tgttcctctt gattttattt gtacttgtaa
     3421 attcatatgc gcaagtgtat gaatgtaagt gatagccctt ttagacttca caattctctt
     3481 caattactca tccagatgta aaagtttacg ggtgtgaact actgcctttt ttgttgctat
     3541 aataaaacat tgtgcctagg gcaacttata aaagagttta atttgactta tggttccaga
     3601 ggattacggg atcaccatga aagtggcagt gcaacaagtg ttgcgcatga cgctaaaaga
     3661 gggggcttac accttacatc ctcagtatgc agcagaatga gttagaccta ggaattgtgt
     3721 gcagatctaa actctcaagt caaccgccag tgatatatct ccttcagcag ggcaccattt
     3781 cttaaatctt cacacacaca cacccccaaa taataccaac cgagctacct tgatttctct
     3841 gatttcacgc ctatgtgctt gctgtttcta tccaggatga agaaacactg tacataacct
     3901 cttagatgcc ttaactcctg agttaaagga atggatgctt acataagaaa aacattcatg
     3961 agtaaaaatt atttgtttga aattttcttt ttaattgtgc aatatctctc tctctctctc
     4021 tctctctctc tctctctgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     4081 tgtgtgtgga ttccttggat cctgtaggag gaatacaggg atttgtcaat aacctgacct
     4141 tgatcccagg aatcaacttg tcttaactgc ttcgccatat ctttaatcct gtaaatgttt
     4201 taaagactat ttcactttga tggtaggaaa taaagaattc atacaggaga aatgctgtat
     4261 ctatgtgagc aatcttgtaa agactttaga catcatcgtc ttcagtttca aggggaaaaa
     4321 aatcttgctt catttctttt tcatcatagc cgtaacaaaa gcaaattgtt ttccacgttc
     4381 actcatgtgt aatggtggag accaccagtt gtgggtgtgg cttatacttt gcaactcttg
     4441 gagtggctat tgaagtttgg tgtatgtgtg ccaaatccac ttacagaagt atgttaggct
     4501 attgtagttc ttctgtggct tctgttcgtc ttctactgca ctgtcacttg gtaatagtat
     4561 ttgtctgggg ccatgtatga aatgggatcc ctattagctg agtggttcat tgtttagtat
     4621 tagacactgt gttgtctgtg aaagggtggt ggttggtgtg gtggttggtt gttcattgta
     4681 cagagccata ttggatttgg gcctagccgc tttttgactg catggctcaa agtgactagg
     4741 tgactctggg ctgtttggcc acagatattc acccctaaga tgactgccat aagtcttaag
     4801 attgttggac agaggcctct cccatgaatt tacggcacag gaagataaca ttcaagggat
     4861 gcctcagctc gagcagatac cagttacctc ctgagtcaac acctggtcct catcatcgtc
     4921 taccgcctga cctctttgtc tccagctatc actgcctata tcctcatctc cccctcctct
     4981 gtgtttcaca aaggacactc cccctacctg aaagccttaa aagttgtaac gttcactcca
     5041 ataaaggaga ccttgacaac agaa
//
